Miyakogusa Predicted Gene

Lj0g3v0353039.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0353039.1 Non Chatacterized Hit- tr|C5WXL4|C5WXL4_SORBI
Putative uncharacterized protein Sb01g033250
OS=Sorghu,52.27,0.000001,WW_DOMAIN_2,WW/Rsp5/WWP; no description,NULL;
OS03G0396900 PROTEIN,NULL; S-ADENOSYLMETHIONINE-DEPEND,CUFF.24297.1
         (510 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g09160.1                                                       348   8e-96
Glyma17g36020.1                                                       129   8e-30

>Glyma14g09160.1 
          Length = 479

 Score =  348 bits (893), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 192/403 (47%), Positives = 238/403 (59%), Gaps = 72/403 (17%)

Query: 131 HDKTNSSISCISILGQSESSYCDGAVEVDMTHCASGEGE-------LESLPTCSEGSGCD 183
           +D+ +   +  S  G S  S+  GA    + +C +   E       LE  P   + + CD
Sbjct: 27  NDRVDLKTAPASDTGVSAGSHLKGA---GVNYCGTEYDESLIDSECLEVSPIVGKNTDCD 83

Query: 184 RI---DGSNYCSEHG--------------EWMVLWDTFYKRRYFYNVTTDSSTWDPPPGM 226
            I   DG+  C  H                WMV+WDTFY+R YFYN+ T +STWD P GM
Sbjct: 84  TIYNDDGAATCHPHSIESELHPVSSEGIEYWMVVWDTFYERTYFYNIRTHTSTWDAPSGM 143

Query: 227 EHLAIGGSTESDDNEALKSAEDHGTQNNNEPPDETWIEENASGKPHEGYSAQTGVAAGNF 286
           EHLA G  TESDD++ LK++E+ G QN+ +PP+ET IEEN   K HE Y  ++GVA GN 
Sbjct: 144 EHLATGRYTESDDSKTLKASEEWGIQNSTKPPEETLIEENLEVKQHEEYLTESGVAVGNL 203

Query: 287 VFEMATNNEDQSIDHSDENFESSCNDGVSCCSVLNALDHIISSNGRYIQEEPEVDHTPME 346
           V ++ T+                      C                 IQ   E +HTP+E
Sbjct: 204 VSDITTH---------------------GC-----------------IQAASEDNHTPLE 225

Query: 347 NMVIDISELDTESDPSTSXXXXXXXXXXXXXXXXLYNETEDLHFQNIPEAYSATIGKYWC 406
           NM+ID+S LD++SDP  S                LYNE E++     PE YSA +GKYWC
Sbjct: 226 NMLIDMSGLDSKSDPFESKQGKKVKRRQRQRK--LYNEAEEM-----PEVYSAAVGKYWC 278

Query: 407 QRYILFSRFDDGVKMDEEGWFSVTPEAVARYQSIRCASSTIIDCFAGVGGNAIQFTQRCG 466
           QRY LFSRFDDGVK+DEEGWFSVTPE +AR+Q+IRCAS  IID F GVGGNAIQF Q+C 
Sbjct: 279 QRYSLFSRFDDGVKLDEEGWFSVTPEVIARHQAIRCASGVIIDGFTGVGGNAIQFAQQCR 338

Query: 467 HVIAIDIDPLKIDYARHNASIYGVDDQIEFIIGDFFLLAPKLK 509
           HVI IDIDPLKI+YARHNA+IYGVDDQIEF++GDFF LAP LK
Sbjct: 339 HVIGIDIDPLKIEYARHNAAIYGVDDQIEFVVGDFFHLAPMLK 381


>Glyma17g36020.1 
          Length = 396

 Score =  129 bits (324), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 58/83 (69%), Positives = 67/83 (80%), Gaps = 5/83 (6%)

Query: 381 LYNETEDLHFQNIPEAYSATIGKYWCQRYILFSRFDDGVKMDEEGWFSVTPEAVARYQSI 440
           LYNE E++     PE YS  +GKYWCQR+ LFSRFDDGVKMDEEGWFSVTPE +AR+++I
Sbjct: 206 LYNEAEEM-----PEVYSVAVGKYWCQRHSLFSRFDDGVKMDEEGWFSVTPEVLARHRAI 260

Query: 441 RCASSTIIDCFAGVGGNAIQFTQ 463
           RCAS  IID F GVGGNAIQF +
Sbjct: 261 RCASGVIIDGFTGVGGNAIQFAR 283



 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 46/60 (76%)

Query: 245 SAEDHGTQNNNEPPDETWIEENASGKPHEGYSAQTGVAAGNFVFEMATNNEDQSIDHSDE 304
           ++E+ GTQN+ +PP+ET IEEN   + HE Y  ++GVA GNF+ ++ T+ EDQS++HSDE
Sbjct: 132 ASEECGTQNSTKPPEETLIEENLEVQQHEEYLTKSGVAVGNFISDITTHGEDQSLNHSDE 191