Miyakogusa Predicted Gene

Lj0g3v0352829.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0352829.1 Non Chatacterized Hit- tr|G7JGJ8|G7JGJ8_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,33.12,5e-18,coiled-coil,NULL;
seg,NULL,NODE_87623_length_1141_cov_9.510078.path2.1
         (310 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g30640.1                                                        84   1e-16
Glyma15g35310.1                                                        72   8e-13
Glyma03g17320.1                                                        58   1e-08
Glyma04g30640.2                                                        51   2e-06

>Glyma04g30640.1 
          Length = 2354

 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/228 (22%), Positives = 111/228 (48%), Gaps = 14/228 (6%)

Query: 45   SISIEVQPTKVKNKNQPKYKQY-----WTADLIDKDEVIRETRLRLRDLKKLPTGKKVVI 99
            S+   V P+ V ++    Y ++     W    ID+    +E ++   D+  +P G+ +V+
Sbjct: 2104 SLHTIVPPSTVTHQPLAPYFRHCRGREWAVQAIDQHGNTKEIQVTKADVFLMPPGQHIVV 2163

Query: 100  EWNEEGQPVGEAFGLFLNYIYDLASNANKFPVNYDNWSAVPSTYKDRVWNDIIAV-KFQV 158
             ++ + +  G+A  L       + +++   P+N+++W+ VP +YKD  +N +  +  FQ 
Sbjct: 2164 PFDGQLRAYGDAATLLSGACGRIVTDSKNVPINFESWTKVPKSYKDNCFNILKTLFHFQA 2223

Query: 159  NDEEHKKWILSNMGEKWEENRSWLYHEYYDPSLDLEENIHWGPDSIPKDQWISLL----- 213
            ++   +++ L  M  K+   +  L+   +DPSL  E+ I   P  IP+DQW+S +     
Sbjct: 2224 SESTARRYCLLTMSRKYRNGKHKLWTSAFDPSLSREQLIAKVPYGIPEDQWLSFIDNHLK 2283

Query: 214  ---TEICGKNDSGPTQSSRSSTLSDGVTPTELNDLKLELQATNARIRV 258
                E+C KN     + +   T    +   + +++++EL    +R+ +
Sbjct: 2284 PEYQELCRKNAVVRQKQTVPHTGGAKLLSRKQHEMEVELGRPISRVEL 2331


>Glyma15g35310.1 
          Length = 1053

 Score = 72.0 bits (175), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 61/109 (55%), Gaps = 3/109 (2%)

Query: 67  WTADLIDKDEVIRETRLRLRDLKKLPTGKKVVIEWNEEGQPVGEAFGLFLNYIYDLASNA 126
           WT + ID +E I++ ++++R +  LP   ++++ ++++GQ +GEA  L   ++  LA++ 
Sbjct: 767 WTVEAIDSEETIKKIKVKVRGVNSLPRELRIIVNFDDQGQAIGEAQALLAGFLGTLAADC 826

Query: 127 NKFPVNYDNW---SAVPSTYKDRVWNDIIAVKFQVNDEEHKKWILSNMG 172
             FP++YD W   S VP  Y D  +  I+      N E   K ++ + G
Sbjct: 827 KLFPMDYDRWSGPSGVPKAYFDNCFETILKELCWRNKEIRSKQVIPHTG 875


>Glyma03g17320.1 
          Length = 232

 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 67/130 (51%), Gaps = 13/130 (10%)

Query: 85  LRDLKKLPTGKKVVIEWNEEGQPVGEAFGLFLNYIYDLASNANKFPVNYDNWSAVPSTYK 144
           LRD+  +P GK + +++N   Q +G+      +++  +A N    P+N D+W       K
Sbjct: 85  LRDIWTMPPGKTIDVQFNRRNQAIGKEGRKLASFLGIIARNPELAPLNIDDWRCFDKEEK 144

Query: 145 DRVWNDIIAVKFQVNDEEHKKWILSNMGEKWEENRSWLYHEYYDPSLDLEENIHWGPDSI 204
           +++  D++  KF +  E   +++  ++G+KW++ +  L   Y+             P+ I
Sbjct: 145 NKLV-DLVRKKFSI-PERGVEFVKKSLGKKWKDYKCDLRSMYFTK-----------PNHI 191

Query: 205 PKDQWISLLT 214
           P+DQWI L++
Sbjct: 192 PRDQWIGLVS 201


>Glyma04g30640.2 
          Length = 164

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/110 (22%), Positives = 56/110 (50%), Gaps = 5/110 (4%)

Query: 45  SISIEVQPTKVKNKNQPKYKQY-----WTADLIDKDEVIRETRLRLRDLKKLPTGKKVVI 99
           S+   V P+ V ++    Y ++     W    ID+    +E ++   D+  +P G+ +V+
Sbjct: 52  SLHTIVPPSTVTHQPLAPYFRHCRGREWAVQAIDQHGNTKEIQVTKADVFLMPPGQHIVV 111

Query: 100 EWNEEGQPVGEAFGLFLNYIYDLASNANKFPVNYDNWSAVPSTYKDRVWN 149
            ++ + +  G+A  L       + +++   P+N+++W+ VP +YKD  +N
Sbjct: 112 PFDGQLRAYGDAATLLSGACGRIVTDSKNVPINFESWTKVPKSYKDNCFN 161