Miyakogusa Predicted Gene
- Lj0g3v0352669.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0352669.2 Non Chatacterized Hit- tr|I1JVH7|I1JVH7_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,80,0,GTP-BINDING
PROTEIN ERA HOMOLOG (HERA)(ERA-W)(CONSERVED ERA-LIKE
GTPASE)(CEGA),NULL; MSS1/TRME-RELAT,CUFF.24265.2
(325 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma04g11560.1 460 e-130
Glyma06g11130.1 290 2e-78
Glyma01g41360.1 80 4e-15
>Glyma04g11560.1
Length = 587
Score = 460 bits (1184), Expect = e-130, Method: Compositional matrix adjust.
Identities = 245/325 (75%), Positives = 260/325 (80%), Gaps = 17/325 (5%)
Query: 1 MASLRVVFRHIHINMNHCYSTSPR-PMGGLLLHRRDTWRRRCNSVKPRACSDNHHRSYRV 59
MA+ R V RHIHI+ C++ PR P L + W +K RA S+N++ +
Sbjct: 51 MAAFRGVLRHIHISTFSCFTPPPRIPTMALFSSQGAMWH-----LKSRAGSENYNN---L 102
Query: 60 VLNKDERLG--ERVGHNNTTELGNSTTTIAAIVTSLGGPPAAVGIVRLSGPHAVSIAGRV 117
VL KDERLG E VG E+G S TTIAAIVTS+GGPPAAVGIVRLSGP AVSIAGRV
Sbjct: 103 VLKKDERLGAGECVG-----EVG-SGTTIAAIVTSVGGPPAAVGIVRLSGPGAVSIAGRV 156
Query: 118 FRPGRSTWRPTSHVVEYGVVFDSDGNVIDEVLAVPMLAPRSYTREDVVELQCHGSEVCLR 177
FRP R TWRPTSHVVEYGVV DSDGNVIDEVLAVPMLAPRSYTREDVVELQCHGSEVCLR
Sbjct: 157 FRPARKTWRPTSHVVEYGVVLDSDGNVIDEVLAVPMLAPRSYTREDVVELQCHGSEVCLR 216
Query: 178 RVLRTCLEAGATLAQPGEFTLRAFLNGRLDLSQAENXXXXXXXXXXXXXXXXXXGIQGGF 237
RVLRTCLEAGATLAQPGEFTLRAFLNGRLDLSQAEN GIQGGF
Sbjct: 217 RVLRTCLEAGATLAQPGEFTLRAFLNGRLDLSQAENVARLIAAKSVAAADAALEGIQGGF 276
Query: 238 SSLVRSLRIQCIELLTEIEARLDFDDEMPPLNLNQIMEKIHNMSRDVENALETANYDKLL 297
SSLVRSLR QCIELLTEIEARLDFDDEMPPL+LN IM+KIHNMSR+VENALETANYDKLL
Sbjct: 277 SSLVRSLRSQCIELLTEIEARLDFDDEMPPLDLNLIMDKIHNMSREVENALETANYDKLL 336
Query: 298 QSGLQIAIVGRPNVGKSSLLNAWSK 322
QSGLQIAIVGRPNVGKSSLLNAWSK
Sbjct: 337 QSGLQIAIVGRPNVGKSSLLNAWSK 361
>Glyma06g11130.1
Length = 398
Score = 290 bits (741), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 146/172 (84%), Positives = 149/172 (86%), Gaps = 2/172 (1%)
Query: 153 MLAPRSYTREDVVELQCHGSEVCLRRVLRTCLEAGATLAQPGEFTLRAFLNGRLDLSQAE 212
MLAPRSYTREDVVELQCHGSEVCLRRVLRTCLEAGATLAQPGEFTLRAFLNGRLDLSQAE
Sbjct: 1 MLAPRSYTREDVVELQCHGSEVCLRRVLRTCLEAGATLAQPGEFTLRAFLNGRLDLSQAE 60
Query: 213 NXXXXXXXXXXXXXXXXXXGIQ--GGFSSLVRSLRIQCIELLTEIEARLDFDDEMPPLNL 270
N GIQ GGFSSLVRSLR QCIELLTEIEARLDFDDEMPPL+L
Sbjct: 61 NVARLIAAKSVAAADAALEGIQACGGFSSLVRSLRSQCIELLTEIEARLDFDDEMPPLDL 120
Query: 271 NQIMEKIHNMSRDVENALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSK 322
N M+KIHNMSR+VENALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSK
Sbjct: 121 NLTMDKIHNMSREVENALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSK 172
>Glyma01g41360.1
Length = 112
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 67/117 (57%), Gaps = 7/117 (5%)
Query: 1 MASLRVVFRHIHINMNHCYSTSPRPMGGLLLHRRDTWRRRCNSVKPRACSDNHHRS--YR 58
M + R + HIHI+ ++ P L L TW R S KP +H S Y
Sbjct: 1 MDAFRAMLLHIHISTFSYFTPPPCTPMALFLSHGATWHCRIPS-KPSRTVKSHAGSENYN 59
Query: 59 VVLNKDERLGERVGHNNTTELGNSTTTIAAIVTSLGGPPAAVGIVRLSGPHAVSIAG 115
+VL KD+ LG+ +E+G S TTIAA+VTS+GGPPAAVGIVRLS P AVSI G
Sbjct: 60 LVLKKDKCLGDE---ECVSEVG-SGTTIAAVVTSMGGPPAAVGIVRLSRPGAVSIVG 112