Miyakogusa Predicted Gene

Lj0g3v0352509.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0352509.1 Non Chatacterized Hit- tr|I1J7C2|I1J7C2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.48291 PE,75,0.000001,
,CUFF.24248.1
         (57 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g29330.1                                                        58   3e-09

>Glyma01g29330.1 
          Length = 1049

 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 27/36 (75%), Positives = 30/36 (83%)

Query: 4   LTTQYKLTDIKLDGDGENYVEWKYLVEVSLGGMGKD 39
           +TT  KLT+IKLDGD ENYVEWK LVE SLGGM K+
Sbjct: 263 ITTSCKLTNIKLDGDSENYVEWKNLVEFSLGGMTKE 298