Miyakogusa Predicted Gene

Lj0g3v0352309.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0352309.1 Non Chatacterized Hit- tr|G7LEB1|G7LEB1_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,85.98,0,no
description,ATPase-like, ATP-binding domain; ATPase domain of HSP90
chaperone/DNA topoisomerase I,CUFF.24247.1
         (214 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g22620.1                                                       367   e-102
Glyma08g11730.1                                                       139   3e-33
Glyma05g38400.1                                                        82   5e-16

>Glyma03g22620.1 
          Length = 1702

 Score =  367 bits (942), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 175/216 (81%), Positives = 194/216 (89%), Gaps = 2/216 (0%)

Query: 1   MAATPKEHVEEIRRYKFSIGGKPNPLTEDLHQAVKNLSAELYAKDVHFLMELIQNAEDNQ 60
           M  TPKEH+E+IRR KFSIGG+PNPL EDLHQA KNLS ELYAKDVHFLMEL+QNAEDN+
Sbjct: 1   MEITPKEHIEKIRRTKFSIGGEPNPLREDLHQATKNLSTELYAKDVHFLMELVQNAEDNK 60

Query: 61  YPEGVSPALEFIITSEDITDSGAPATLLIFNNEKGFSPRNIESVCSVGRSTKKDSRSSGY 120
           Y EGVSP+LEFIITS+DIT +GA ATLLIFNNEKGFS  NIES+CSVGRSTKK +RSSGY
Sbjct: 61  YAEGVSPSLEFIITSKDITATGASATLLIFNNEKGFSRENIESICSVGRSTKKGNRSSGY 120

Query: 121 IGEKGIGFKSVFLVTAQPYIFSNGYQIRFNEKPCPHCSLGYVVPEWVEEKPTLQEIRQIY 180
           IGEKGIGFKSVFL+TA PYIFSNGYQIRF+EKPCPHC +GY+VPEWVE+KPTL +I+QIY
Sbjct: 121 IGEKGIGFKSVFLLTAYPYIFSNGYQIRFSEKPCPHCDIGYIVPEWVEQKPTLHDIKQIY 180

Query: 181 --GKDSLPTTTIVLPLKSDKVKAVKQQLSSIHPEVL 214
             G  SLPTTTI+LPLK DKVK VK QLS+IHPEVL
Sbjct: 181 GAGAGSLPTTTIILPLKPDKVKPVKHQLSNIHPEVL 216


>Glyma08g11730.1 
          Length = 2642

 Score =  139 bits (349), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 85/225 (37%), Positives = 128/225 (56%), Gaps = 33/225 (14%)

Query: 9    VEEIRRYKFSIGGKPNPLTE--------DLHQAVKNLSAELYAKDVHFLMELIQNAEDNQ 60
            +E IRR +F +    + +           L +A+  LS ELY++D HF++EL+QNA+DN 
Sbjct: 1017 IESIRRDEFGLDSSLSDIDSCMLKKQHARLGRALHCLSQELYSQDSHFILELVQNADDNN 1076

Query: 61   YPEGVSPALEFIITSEDITDSGAPATLLIFNNEKGFSPRNIESVCSVGRSTKKDSRSSGY 120
            YPE V P L FI     + DSG    +++ NNE+GFS +N+ ++C VG STKK S ++GY
Sbjct: 1077 YPENVEPTLTFI-----LRDSG----IVVLNNERGFSAQNMRALCDVGNSTKKGS-TAGY 1126

Query: 121  IGEKGIGFKSVFLVTAQPYIFSNGYQIRFNEKPCPHCSLGYVVPEWVEEKPTLQEIRQIY 180
            IG+KGIGFKSVF VT  P I SNG+ ++F+        +G+V+P  V     +  +R++ 
Sbjct: 1127 IGKKGIGFKSVFRVTDAPEIHSNGFHVKFD---ISEGQIGFVLPT-VVPPCDIGVLRRMA 1182

Query: 181  GKDSL------PTTTIVLPLKSD-----KVKAVKQQLSSIHPEVL 214
              D+         T I+LP +S       + +V    S +HP +L
Sbjct: 1183 STDTELCDDNPWNTCILLPFRSHLSEGMAMNSVLSMFSDLHPSLL 1227


>Glyma05g38400.1 
          Length = 1276

 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 36/55 (65%), Positives = 45/55 (81%), Gaps = 2/55 (3%)

Query: 146 QIRFNEKPCPHCSLGYVVPEWVEEKPTLQEIRQIY--GKDSLPTTTIVLPLKSDK 198
           Q R ++K  PHC LGY+VPEWVE+ P L++I+QIY  G D+LPTTTI+LPLKSDK
Sbjct: 65  QQRISDKVAPHCGLGYIVPEWVEQNPALEDIKQIYRAGDDTLPTTTIILPLKSDK 119