Miyakogusa Predicted Gene

Lj0g3v0351649.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0351649.1 Non Chatacterized Hit- tr|D7KPV0|D7KPV0_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,52.94,9e-19,DUF2040,Domain of unknown function DUF2040; INNER
MEMBRANE PROTEIN,NULL; coiled-coil,NULL; seg,NULL,CUFF.24166.1
         (172 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g43410.1                                                       239   1e-63
Glyma20g23430.1                                                       233   1e-61

>Glyma10g43410.1 
          Length = 316

 Score =  239 bits (610), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 121/172 (70%), Positives = 137/172 (79%), Gaps = 2/172 (1%)

Query: 1   MKEKVAKPLIQDREERKPKYIQNLIKKAKEREQYREIVYEKKIAMERDKDDHLYADKDKY 60
           MKEKVA+PL+QDREERKPKYIQNLIKKAKEREQYREIVYEKKIA ER KDDHLYADKDK+
Sbjct: 77  MKEKVARPLVQDREERKPKYIQNLIKKAKEREQYREIVYEKKIAKERSKDDHLYADKDKF 136

Query: 61  VTEAYRRKLAXXXXXXXXXXXXXXXXXXDDVTKKKDFLLDFYSNLDKNVAYGAKDAQGRK 120
           +TEAYR+KLA                  DDVTKKKDFLLDFY+NLDKNVAYGAKDA+ RK
Sbjct: 137 ITEAYRKKLAERERQMELERLRELQEERDDVTKKKDFLLDFYANLDKNVAYGAKDAEARK 196

Query: 121 RDNQAEHRVPETHEGVNPDASDRHHQHGDASDEKQHSLGNSSPPVESSKEKI 172
           R+NQAEHRVPETHEGV+   +   H++ + S+E QHSLGNSS P  S + K+
Sbjct: 197 RENQAEHRVPETHEGVS--LASNEHENCNVSEEVQHSLGNSSSPAGSPRVKL 246


>Glyma20g23430.1 
          Length = 316

 Score =  233 bits (593), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 121/172 (70%), Positives = 133/172 (77%), Gaps = 2/172 (1%)

Query: 1   MKEKVAKPLIQDREERKPKYIQNLIKKAKEREQYREIVYEKKIAMERDKDDHLYADKDKY 60
           MKEKVA+PL+QDREERKPKYIQNLIKKAKEREQYREIVYEKKIA ER KDDHLYA KDK+
Sbjct: 77  MKEKVARPLVQDREERKPKYIQNLIKKAKEREQYREIVYEKKIAKERSKDDHLYAGKDKF 136

Query: 61  VTEAYRRKLAXXXXXXXXXXXXXXXXXXDDVTKKKDFLLDFYSNLDKNVAYGAKDAQGRK 120
           +TEAYR+KLA                  DDVTKKKDFLLDFY+NLDKNVAYGAKDA+ RK
Sbjct: 137 ITEAYRKKLAERERQMELERLRELQEERDDVTKKKDFLLDFYANLDKNVAYGAKDAEARK 196

Query: 121 RDNQAEHRVPETHEGVNPDASDRHHQHGDASDEKQHSLGNSSPPVESSKEKI 172
            DNQA HRVPETHE V+   +   H+  + SDE QHSLGNSS P ES + KI
Sbjct: 197 HDNQAGHRVPETHERVS--HASNEHEPRNVSDEVQHSLGNSSSPAESPRVKI 246