Miyakogusa Predicted Gene

Lj0g3v0350809.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0350809.1 Non Chatacterized Hit- tr|B8B2Y7|B8B2Y7_ORYSI
Putative uncharacterized protein OS=Oryza sativa subsp,55.26,2e-18,no
description,NULL; SUBFAMILY NOT NAMED,NULL;
HEXAPRENYLDIHYDROXYBENZOATE METHYLTRANSFERASE,Ubiquin,CUFF.24102.1
         (81 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g45780.1                                                       161   1e-40
Glyma14g03030.1                                                       150   3e-37

>Glyma02g45780.1 
          Length = 291

 Score =  161 bits (408), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 75/81 (92%), Positives = 79/81 (97%)

Query: 1   MRAYATAIVAAEYILRWLPRGTHEWSSFLTPEELVLILQRAGINVEEMAGFVYNPLTGRW 60
           MRAYATAIVAAEYILRWLPRGTH+WSSFLTPEELVLILQRAGINVEEMAGFVYNP+TGRW
Sbjct: 211 MRAYATAIVAAEYILRWLPRGTHQWSSFLTPEELVLILQRAGINVEEMAGFVYNPVTGRW 270

Query: 61  SLSDDISVNFIAFGTKTKSIE 81
           SLSDDISVNFIAFGTK+ + E
Sbjct: 271 SLSDDISVNFIAFGTKSNNTE 291


>Glyma14g03030.1 
          Length = 296

 Score =  150 bits (380), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 70/76 (92%), Positives = 73/76 (96%)

Query: 1   MRAYATAIVAAEYILRWLPRGTHEWSSFLTPEELVLILQRAGINVEEMAGFVYNPLTGRW 60
           MRAY TAIVAAEYILRWLPRGTH+WSSFLTPEELVLILQRAGINVEEMAG +YNP+TG W
Sbjct: 221 MRAYTTAIVAAEYILRWLPRGTHQWSSFLTPEELVLILQRAGINVEEMAGIMYNPVTGGW 280

Query: 61  SLSDDISVNFIAFGTK 76
           SLSDDISVNFIAFGTK
Sbjct: 281 SLSDDISVNFIAFGTK 296