Miyakogusa Predicted Gene

Lj0g3v0349819.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0349819.1 Non Chatacterized Hit- tr|A5B4E4|A5B4E4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,49.58,7e-19,THIOREDOXIN-LIKE PROTEN 4A, 4B,NULL; THIOREDOXIN-LIKE
PROTEN 4A, 4B,mRNA splicing factor, thioredoxi,CUFF.24022.1
         (98 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g33110.1                                                       165   1e-41
Glyma19g28850.1                                                        65   2e-11
Glyma09g42010.1                                                        65   2e-11

>Glyma20g33110.1 
          Length = 151

 Score =  165 bits (417), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 82/97 (84%), Positives = 89/97 (91%)

Query: 1  MNYMLTTLSKKKEVDSIIRDTIDKVLVLRFGRASDPVCLQLDQILSKAARDVSKFATVAL 60
          M+ MLTT +KKKEVD+IIRDT DKV+VLRFGRASD VCLQ D ILSKAARDVSKFATVAL
Sbjct: 1  MSDMLTTFTKKKEVDTIIRDTFDKVVVLRFGRASDLVCLQQDHILSKAARDVSKFATVAL 60

Query: 61 VDVDSPDIQVYVKYFDITLIPSTMFFFNAHHMKMDSG 97
          VDVDS +IQVY+KYFDITLIPST+FFFNAHHMKMD G
Sbjct: 61 VDVDSEEIQVYLKYFDITLIPSTVFFFNAHHMKMDYG 97


>Glyma19g28850.1 
          Length = 142

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 6/99 (6%)

Query: 1  MNYMLTTLSKKKEVDSIIRDTIDKVLVLRFGRASDPVCLQLDQILSKAARDVSKFATVAL 60
          M+Y+L  L     VD  I    ++++V+RFG   D  C+Q+D++L+  A  +  FA + L
Sbjct: 1  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60

Query: 61 VDV-DSPDIQVYVKYFDITLIPST-MFFFNAHHMKMDSG 97
          VD+ + PD     + +D    PST MFFF   H+ +D G
Sbjct: 61 VDITEVPDFNTMYELYD----PSTVMFFFRNKHIMIDLG 95


>Glyma09g42010.1 
          Length = 142

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 6/99 (6%)

Query: 1  MNYMLTTLSKKKEVDSIIRDTIDKVLVLRFGRASDPVCLQLDQILSKAARDVSKFATVAL 60
          M+Y+L  L     VD  I    ++++V+RFG   D  C+Q+D++L+  A  +  FA + L
Sbjct: 1  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60

Query: 61 VDV-DSPDIQVYVKYFDITLIPST-MFFFNAHHMKMDSG 97
          VD+ + PD     + +D    PST MFFF   H+ +D G
Sbjct: 61 VDITEVPDFNTMYELYD----PSTVMFFFRNKHIMIDLG 95