Miyakogusa Predicted Gene

Lj0g3v0349719.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0349719.1 CUFF.24015.1
         (133 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g07640.1                                                        51   3e-07
Glyma18g07610.1                                                        51   3e-07

>Glyma18g07640.1 
          Length = 141

 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 52/120 (43%), Gaps = 10/120 (8%)

Query: 20  KYDGSNTN-PFQQSSPTLLVXXXXXXXXXXXXXXXXXXLRITSIVFHLSGVAACELLLWI 78
           KY  SNTN PFQQS   +L                    +I  I FH+SG+  CE LLWI
Sbjct: 21  KYGVSNTNNPFQQSRFLMLFLTAIFSHVLASTADMTK--QIIIITFHMSGITGCETLLWI 78

Query: 79  LLPDFWFTIVINXXXXXXXXXPCFVNCINNI------NIRELLRRDGGDTAQIQNIESPP 132
           L+ DF    ++N           F N +  +       I +LL +  G   Q++N+E  P
Sbjct: 79  LIHDFMCYFMVNLLLLLLAKF-FFFNQVAQLVVYFFKYISQLLLQVSGYIDQMRNVEQQP 137


>Glyma18g07610.1 
          Length = 141

 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 52/120 (43%), Gaps = 10/120 (8%)

Query: 20  KYDGSNTN-PFQQSSPTLLVXXXXXXXXXXXXXXXXXXLRITSIVFHLSGVAACELLLWI 78
           KY  SNTN PFQQS   +L                    +I  I FH+SG+  CE LLWI
Sbjct: 21  KYGVSNTNNPFQQSRFLMLFLTAIFSHVLASTADMTK--QIIIITFHMSGITGCETLLWI 78

Query: 79  LLPDFWFTIVINXXXXXXXXXPCFVNCINNI------NIRELLRRDGGDTAQIQNIESPP 132
           L+ DF    ++N           F N +  +       I +LL +  G   Q++N+E  P
Sbjct: 79  LIHDFMCYFMVNLLLLLLAKF-FFFNQVAQLVVYFFKYISQLLLQVSGYIDQMRNVEQQP 137