Miyakogusa Predicted Gene

Lj0g3v0346729.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0346729.1 Non Chatacterized Hit- tr|I3T5L3|I3T5L3_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,76.21,0,seg,NULL; Tetraspannin,Tetraspanin/Peripherin; SUBFAMILY
NOT NAMED,NULL; TETRASPANIN,NULL,CUFF.23791.1
         (247 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g04820.1                                                       320   8e-88
Glyma13g19210.1                                                       317   7e-87
Glyma11g04450.1                                                       143   2e-34
Glyma01g40890.1                                                       142   4e-34
Glyma05g06080.3                                                       139   4e-33
Glyma05g06080.2                                                       139   4e-33
Glyma05g06080.1                                                       139   4e-33
Glyma17g16370.2                                                       131   5e-31
Glyma17g16370.1                                                       131   5e-31
Glyma06g44810.1                                                       119   4e-27
Glyma12g12530.1                                                       119   4e-27

>Glyma10g04820.1 
          Length = 244

 Score =  320 bits (820), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 163/246 (66%), Positives = 188/246 (76%), Gaps = 3/246 (1%)

Query: 1   MRPNCCHVSLAFVLKFLNFLQAFVGVSILLYSVWMLNQWDHRVPQPPLPHISLPRIVSAI 60
           MR N CHVSL FVLKFLNFLQ FVG+SILLYS+WM N+WDH VP  P    +       +
Sbjct: 1   MRLNLCHVSLGFVLKFLNFLQCFVGLSILLYSLWMFNEWDHSVPPDPPLPPAFHFY---L 57

Query: 61  NVNSLNLPAPWFIYAFMGVGILMCCITFLGCIAAEMINGFCLCFYTLIITVLVLAEAALV 120
            +NS+NLPAPWFIY FMG GIL+ CI+FLGCIAAEMING CLCFY++++ VL+L EA+LV
Sbjct: 58  KLNSINLPAPWFIYNFMGFGILVLCISFLGCIAAEMINGCCLCFYSILVVVLLLLEASLV 117

Query: 121 GFIAIDHHWREDIPVDPTGQLESLQSFIEENQDICRWVGIXXXXXXXXXXXXXXXXRATI 180
           GFIA+D  W +DIP DPTGQL+ L++FIE+N D C WVGI                RAT+
Sbjct: 118 GFIALDSDWEKDIPFDPTGQLDELRAFIEDNIDTCTWVGIAVLVIQALSLLLALILRATV 177

Query: 181 STRRADFDYEDEYDVRGRSWEPLLNPQSGQPSGSGKVDNRGNHSDIWSSRMREKYGLNNG 240
           S+RRADFDYED YDVRGRSWEPLLNPQ GQPSGS K DN GNHSD WS RMREKYGLN+G
Sbjct: 178 SSRRADFDYEDGYDVRGRSWEPLLNPQPGQPSGSSKGDNSGNHSDFWSVRMREKYGLNHG 237

Query: 241 DKQSHQ 246
           DK S+Q
Sbjct: 238 DKSSYQ 243


>Glyma13g19210.1 
          Length = 245

 Score =  317 bits (812), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 166/247 (67%), Positives = 191/247 (77%), Gaps = 4/247 (1%)

Query: 1   MRPNCCHVSLAFVLKFLNFLQAFVGVSILLYSVWMLNQWDHRVPQPPLPHISLPRIVSAI 60
           MR N CHVSL FVLKFLNFLQ FVG+SILLYS+WM N+WDHRVP  P    +       +
Sbjct: 1   MRLNLCHVSLGFVLKFLNFLQCFVGLSILLYSLWMFNEWDHRVPPDPPLPPAFHFY---L 57

Query: 61  NVNSLNLPAPWFIYAFMGVGILMCCITFLGCIAAEMINGFCLCFYTLIITVLVLAEAALV 120
             NS+NLPAPWFIY FMG+GIL+ CI+FLGCIAAEMING CLCFYT+++ VL+L EA+LV
Sbjct: 58  KFNSINLPAPWFIYDFMGLGILVLCISFLGCIAAEMINGCCLCFYTILVAVLLLLEASLV 117

Query: 121 GFIAIDHHWREDIPVDPTGQLESLQSFIEENQDICRWVGIXXXXXXXXXXXXXXXXRATI 180
           GFIA+D  W +DIP+DPTGQL+ L++FIE+N DIC WVGI                RAT+
Sbjct: 118 GFIALDSDWEKDIPLDPTGQLDELRAFIEDNIDICTWVGIAVLVVQALSLLLALILRATV 177

Query: 181 STRRADFDYEDEYDVRGRSWEPLLNPQSGQPSGSGKVDNRGNHSDIWSSRMREKYGLNN- 239
           S RRADFDYED YDVRGRSWEPLLNPQ GQPSGS K DN GNHSD WSSRMR+KYGLN+ 
Sbjct: 178 SARRADFDYEDGYDVRGRSWEPLLNPQPGQPSGSSKGDNSGNHSDFWSSRMRQKYGLNHG 237

Query: 240 GDKQSHQ 246
           GDK S+Q
Sbjct: 238 GDKYSYQ 244


>Glyma11g04450.1 
          Length = 283

 Score =  143 bits (360), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 132/249 (53%), Gaps = 23/249 (9%)

Query: 13  VLKFLNFLQAFVGVSILLYSVWMLNQWDHRVPQPPLPHIS------------LPRIVSAI 60
           +LK  NF+    G++I+ Y +++  ++        +P IS             P +++  
Sbjct: 10  LLKLFNFILTLTGLAIVGYGIYLFVEFSKASDDDNMPAISPVSDDSSLIQLGRPVLMAVS 69

Query: 61  NVNSL--NLPAPWFIYAFMGVGILMCCITFLGCIAAEMINGFCLCFYTLIITVLVLAEAA 118
             N    NLP  WFIY F+G+G+++  I+  GCI A   NG CL  Y++++ +L+L E  
Sbjct: 70  LSNDFFDNLPRAWFIYLFIGIGVVLFLISCFGCIGAAARNGCCLSCYSILVALLILVELG 129

Query: 119 LVGFIAIDHHWREDIPVDPTGQLESLQSFIEENQDICRWVGIXXXXXXXXXXXXXXXXRA 178
              FI  D +W+E IP D TG+ +++  F+ EN +I +WV +                RA
Sbjct: 130 CAAFIFFDKNWKEQIPTDKTGEFDAIYGFLIENWNIMKWVALGIVIFEALLFLLALIVRA 189

Query: 179 TISTRRADFDYEDEY-DVRGRSWEPLLN-----PQSGQPSGSGKVDNRGNHSDIWSSRMR 232
             + R AD+D ++E+ + R +  +PLLN     P +G P  +G +D R + +D WS+RMR
Sbjct: 190 --ANRPADYDSDEEFINPRQQVQQPLLNRLPAGPATGIPV-AGTIDQRPSRNDAWSTRMR 246

Query: 233 EKYGLNNGD 241
           EKYGL+  +
Sbjct: 247 EKYGLDTSE 255


>Glyma01g40890.1 
          Length = 283

 Score =  142 bits (357), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 130/248 (52%), Gaps = 21/248 (8%)

Query: 13  VLKFLNFLQAFVGVSILLYSVWMLNQWDHRVPQPPLPHIS------------LPRIVSAI 60
           +LK  NF+    G++I+ Y +++  ++         P IS             P +++  
Sbjct: 10  LLKLFNFILTLTGLAIVGYGIYLFVEFSKASDDDNTPAISPVSDDSALIQLGRPVLMAVS 69

Query: 61  NVNSL--NLPAPWFIYAFMGVGILMCCITFLGCIAAEMINGFCLCFYTLIITVLVLAEAA 118
             N    NLP  WFIY F+G+G+++  I+  GCI A   NG CL  Y++++ +L+L E  
Sbjct: 70  LSNDFFDNLPRAWFIYLFIGIGVVLFLISCFGCIGAATRNGCCLSCYSILVALLILVELG 129

Query: 119 LVGFIAIDHHWREDIPVDPTGQLESLQSFIEENQDICRWVGIXXXXXXXXXXXXXXXXRA 178
              FI  D +W+E+IP D TG  +++  F+ EN +I +WV +                RA
Sbjct: 130 CAAFIFFDKNWKEEIPTDKTGDFDAIYGFLIENWNIVKWVALGIVIFEALLFLLALIVRA 189

Query: 179 TISTRRADFDYEDEY-DVRGRSWEPLLNPQSGQPSG----SGKVDNRGNHSDIWSSRMRE 233
             + R AD+D ++E+ + R +  +PLLN  +  P+     +G +D R + +D WS+RMRE
Sbjct: 190 --ANRPADYDSDEEFINPRQQVRQPLLNRPAASPATGLPVAGTMDQRPSRNDAWSTRMRE 247

Query: 234 KYGLNNGD 241
           KYGL+  +
Sbjct: 248 KYGLDTSE 255


>Glyma05g06080.3 
          Length = 277

 Score =  139 bits (349), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 83/244 (34%), Positives = 135/244 (55%), Gaps = 19/244 (7%)

Query: 13  VLKFLNFLQAFVGVSILLYSVWMLNQWDHRVPQPPLP--------HISLPRIVSAINVNS 64
           +LK LNF+    G++++ Y +++  ++ ++ P   L          +  P +V+    NS
Sbjct: 10  LLKLLNFILTLAGLAMVGYGIYLFVEY-NKTPDNTLTVGDDQTLVQLGRPMLVAVSLSNS 68

Query: 65  L--NLPAPWFIYAFMGVGILMCCITFLGCIAAEMINGFCLCFYTLIITVLVLAEAALVGF 122
              +LP  WFIY F+G+G ++  I+  GCIAA   NG CL FY++++ +L+L E     F
Sbjct: 69  FLDDLPKAWFIYLFIGIGAVLFVISCFGCIAALTRNGCCLSFYSVLVLLLILVELGCAAF 128

Query: 123 IAIDHHWREDIPVDPTGQLESLQSFIEENQDICRWVGIXXXXXXXXXXXXXXXXRATIST 182
           I  D  W+E+IP D TG  + +  F+ EN +I RWV +                RA  + 
Sbjct: 129 IFFDKSWKEEIPTDKTGDFDMIYGFLRENWNIVRWVALGIVIFEALLFVLALIVRA--AN 186

Query: 183 RRADFDYEDEY-DVRGRSWEPLLN----PQSGQPSGSGKVDNRGNHSDIWSSRMREKYGL 237
           R  ++D ++EY + R ++ +PLLN    P SG P+ +G +D R + +D WS+RMREKYGL
Sbjct: 187 RPTEYDSDEEYINPRQQARQPLLNRPAGPVSGAPA-TGTLDQRPSRNDAWSTRMREKYGL 245

Query: 238 NNGD 241
           +  +
Sbjct: 246 DTSE 249


>Glyma05g06080.2 
          Length = 277

 Score =  139 bits (349), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 83/244 (34%), Positives = 135/244 (55%), Gaps = 19/244 (7%)

Query: 13  VLKFLNFLQAFVGVSILLYSVWMLNQWDHRVPQPPLP--------HISLPRIVSAINVNS 64
           +LK LNF+    G++++ Y +++  ++ ++ P   L          +  P +V+    NS
Sbjct: 10  LLKLLNFILTLAGLAMVGYGIYLFVEY-NKTPDNTLTVGDDQTLVQLGRPMLVAVSLSNS 68

Query: 65  L--NLPAPWFIYAFMGVGILMCCITFLGCIAAEMINGFCLCFYTLIITVLVLAEAALVGF 122
              +LP  WFIY F+G+G ++  I+  GCIAA   NG CL FY++++ +L+L E     F
Sbjct: 69  FLDDLPKAWFIYLFIGIGAVLFVISCFGCIAALTRNGCCLSFYSVLVLLLILVELGCAAF 128

Query: 123 IAIDHHWREDIPVDPTGQLESLQSFIEENQDICRWVGIXXXXXXXXXXXXXXXXRATIST 182
           I  D  W+E+IP D TG  + +  F+ EN +I RWV +                RA  + 
Sbjct: 129 IFFDKSWKEEIPTDKTGDFDMIYGFLRENWNIVRWVALGIVIFEALLFVLALIVRA--AN 186

Query: 183 RRADFDYEDEY-DVRGRSWEPLLN----PQSGQPSGSGKVDNRGNHSDIWSSRMREKYGL 237
           R  ++D ++EY + R ++ +PLLN    P SG P+ +G +D R + +D WS+RMREKYGL
Sbjct: 187 RPTEYDSDEEYINPRQQARQPLLNRPAGPVSGAPA-TGTLDQRPSRNDAWSTRMREKYGL 245

Query: 238 NNGD 241
           +  +
Sbjct: 246 DTSE 249


>Glyma05g06080.1 
          Length = 277

 Score =  139 bits (349), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 83/244 (34%), Positives = 135/244 (55%), Gaps = 19/244 (7%)

Query: 13  VLKFLNFLQAFVGVSILLYSVWMLNQWDHRVPQPPLP--------HISLPRIVSAINVNS 64
           +LK LNF+    G++++ Y +++  ++ ++ P   L          +  P +V+    NS
Sbjct: 10  LLKLLNFILTLAGLAMVGYGIYLFVEY-NKTPDNTLTVGDDQTLVQLGRPMLVAVSLSNS 68

Query: 65  L--NLPAPWFIYAFMGVGILMCCITFLGCIAAEMINGFCLCFYTLIITVLVLAEAALVGF 122
              +LP  WFIY F+G+G ++  I+  GCIAA   NG CL FY++++ +L+L E     F
Sbjct: 69  FLDDLPKAWFIYLFIGIGAVLFVISCFGCIAALTRNGCCLSFYSVLVLLLILVELGCAAF 128

Query: 123 IAIDHHWREDIPVDPTGQLESLQSFIEENQDICRWVGIXXXXXXXXXXXXXXXXRATIST 182
           I  D  W+E+IP D TG  + +  F+ EN +I RWV +                RA  + 
Sbjct: 129 IFFDKSWKEEIPTDKTGDFDMIYGFLRENWNIVRWVALGIVIFEALLFVLALIVRA--AN 186

Query: 183 RRADFDYEDEY-DVRGRSWEPLLN----PQSGQPSGSGKVDNRGNHSDIWSSRMREKYGL 237
           R  ++D ++EY + R ++ +PLLN    P SG P+ +G +D R + +D WS+RMREKYGL
Sbjct: 187 RPTEYDSDEEYINPRQQARQPLLNRPAGPVSGAPA-TGTLDQRPSRNDAWSTRMREKYGL 245

Query: 238 NNGD 241
           +  +
Sbjct: 246 DTSE 249


>Glyma17g16370.2 
          Length = 277

 Score =  131 bits (330), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 127/242 (52%), Gaps = 15/242 (6%)

Query: 13  VLKFLNFLQAFVGVSILLYSVWML----NQWDHRV---PQPPLPHISLPRIVSAINVNSL 65
           +LK LNF+    G++++ Y +++       WD+ +             P +V     NS 
Sbjct: 10  LLKLLNFILTLAGLAMVGYGIYLFVEYNKAWDNTLNFSEDKTEVQFGRPMLVVVSLSNSF 69

Query: 66  --NLPAPWFIYAFMGVGILMCCITFLGCIAAEMINGFCLCFYTLIITVLVLAEAALVGFI 123
              LP  WFIY F+G+G ++  I+  GCIAA   NG CL FY++++ +L+L E     F 
Sbjct: 70  LDELPKAWFIYLFIGIGAVLFVISCFGCIAALTRNGCCLSFYSVLVLLLILVELGCAAFT 129

Query: 124 AIDHHWREDIPVDPTGQLESLQSFIEENQDICRWVGIXXXXXXXXXXXXXXXXRATISTR 183
             D  W+E+IP D TG  + +  F+ EN ++ RWV +                RA  + R
Sbjct: 130 FFDKSWKEEIPKDKTGDFDMIYEFLRENWNVVRWVALGIVIFEALLFVLALIVRA--ANR 187

Query: 184 RADFDYEDEY-DVRGRSWEPLLNPQSGQPSG---SGKVDNRGNHSDIWSSRMREKYGLNN 239
             ++D ++EY + R +  +PLLN  +G  SG   +G +D R + +D WS+RMREKYGL+ 
Sbjct: 188 PPEYDSDEEYINPRQQVRQPLLNRPAGPASGAPATGTLDKRPSRNDAWSARMREKYGLDT 247

Query: 240 GD 241
            +
Sbjct: 248 SE 249


>Glyma17g16370.1 
          Length = 277

 Score =  131 bits (330), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 127/242 (52%), Gaps = 15/242 (6%)

Query: 13  VLKFLNFLQAFVGVSILLYSVWML----NQWDHRV---PQPPLPHISLPRIVSAINVNSL 65
           +LK LNF+    G++++ Y +++       WD+ +             P +V     NS 
Sbjct: 10  LLKLLNFILTLAGLAMVGYGIYLFVEYNKAWDNTLNFSEDKTEVQFGRPMLVVVSLSNSF 69

Query: 66  --NLPAPWFIYAFMGVGILMCCITFLGCIAAEMINGFCLCFYTLIITVLVLAEAALVGFI 123
              LP  WFIY F+G+G ++  I+  GCIAA   NG CL FY++++ +L+L E     F 
Sbjct: 70  LDELPKAWFIYLFIGIGAVLFVISCFGCIAALTRNGCCLSFYSVLVLLLILVELGCAAFT 129

Query: 124 AIDHHWREDIPVDPTGQLESLQSFIEENQDICRWVGIXXXXXXXXXXXXXXXXRATISTR 183
             D  W+E+IP D TG  + +  F+ EN ++ RWV +                RA  + R
Sbjct: 130 FFDKSWKEEIPKDKTGDFDMIYEFLRENWNVVRWVALGIVIFEALLFVLALIVRA--ANR 187

Query: 184 RADFDYEDEY-DVRGRSWEPLLNPQSGQPSG---SGKVDNRGNHSDIWSSRMREKYGLNN 239
             ++D ++EY + R +  +PLLN  +G  SG   +G +D R + +D WS+RMREKYGL+ 
Sbjct: 188 PPEYDSDEEYINPRQQVRQPLLNRPAGPASGAPATGTLDKRPSRNDAWSARMREKYGLDT 247

Query: 240 GD 241
            +
Sbjct: 248 SE 249


>Glyma06g44810.1 
          Length = 211

 Score =  119 bits (297), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 95/181 (52%), Gaps = 15/181 (8%)

Query: 13  VLKFLNFLQAFVGVSILLYSVWMLNQWDHRVPQPPLPHISLPRIVSAINVNSLNLPAPWF 72
           +LK +N +    G++++LYS WM+  W  ++ + P  H S             + P PWF
Sbjct: 12  ILKLVNSVIGMAGLAMILYSAWMIRVWQRKMGELPFGHDS-------------DYPPPWF 58

Query: 73  IYAFMGVGILMCCITFLGCIAAEMINGFCLCFYTLIITVLVLAEAALVGFIAIDHHWRED 132
           IY F+G+G+  C IT LG +AAE  NG CL  Y + + +L++ EAA+   + ++  W +D
Sbjct: 59  IYMFLGLGVAFCVITCLGHVAAETANGCCLYLYMVFVVLLIMLEAAVTVDVFVNQDWEKD 118

Query: 133 IPVDPTGQLESLQSFIEENQDICRWVGIXXXXXXXXXXXXXXXXRATISTRRADFDYEDE 192
            P DP+G  +  ++FI  N ++C+WVG+                +A    +   +D +DE
Sbjct: 119 FPKDPSGSFDQFKNFIRSNYEMCKWVGLSLVSVQGLSLLLAMILKALGPHQY--YDSDDE 176

Query: 193 Y 193
           Y
Sbjct: 177 Y 177


>Glyma12g12530.1 
          Length = 223

 Score =  119 bits (297), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 94/181 (51%), Gaps = 15/181 (8%)

Query: 13  VLKFLNFLQAFVGVSILLYSVWMLNQWDHRVPQPPLPHISLPRIVSAINVNSLNLPAPWF 72
            LK +N +    G++++LYS WM+  W  ++ + P  H S             + P PWF
Sbjct: 12  TLKLVNSVIGMAGLAMILYSAWMIRVWQRKMGELPFGHDS-------------DYPPPWF 58

Query: 73  IYAFMGVGILMCCITFLGCIAAEMINGFCLCFYTLIITVLVLAEAALVGFIAIDHHWRED 132
           IY F+G+G+  C IT LG +AAE  NG CL  Y + + +L++ EAA+   + ++  W +D
Sbjct: 59  IYTFLGLGVAFCVITCLGHVAAETANGCCLYLYIVFVVLLIMLEAAVTVDVFVNQDWEKD 118

Query: 133 IPVDPTGQLESLQSFIEENQDICRWVGIXXXXXXXXXXXXXXXXRATISTRRADFDYEDE 192
            P DP+G  +  ++FI  N ++C+WVG+                +A    +   +D +DE
Sbjct: 119 FPKDPSGSFDQFKNFIRSNYEMCKWVGLSLVSVQGLSLLLAMILKALGPHQY--YDSDDE 176

Query: 193 Y 193
           Y
Sbjct: 177 Y 177