Miyakogusa Predicted Gene

Lj0g3v0345939.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0345939.1 tr|B9H2Q0|B9H2Q0_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_555746 PE=4
SV=1,87.89,0,GBP,Guanylate-binding protein, N-terminal;
GBP_C,Guanylate-binding protein, C-terminal; Interferon-i,CUFF.23774.1
         (290 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g24260.1                                                       552   e-157
Glyma07g32290.1                                                       551   e-157
Glyma07g32290.2                                                       550   e-157
Glyma13g30780.1                                                       545   e-155
Glyma17g31830.1                                                        74   1e-13
Glyma10g03660.1                                                        60   4e-09
Glyma02g16130.1                                                        57   3e-08

>Glyma13g24260.1 
          Length = 1060

 Score =  552 bits (1423), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 261/290 (90%), Positives = 273/290 (94%)

Query: 1   MFVYNQMGGIDEAALDRLSLVTQMTKHIRVRASGGKSSASELGQFSPIFVWLLRDFYLDL 60
           MF+YNQMGGIDEA+LDRLSLVTQMTKHIRVRASGGK+SASELGQFSPIFVWLLRDFYLDL
Sbjct: 161 MFIYNQMGGIDEASLDRLSLVTQMTKHIRVRASGGKTSASELGQFSPIFVWLLRDFYLDL 220

Query: 61  TEDNRKITPRDYLELALRPVQGSGRDIAAKNEIRDSIRALFPDRECFTLVRPLNNENDLQ 120
           TEDNRKITPRDYLE+ALRPVQGSG+DI AKNEIRDSIRALFPDRECFTLVRPLNNENDLQ
Sbjct: 221 TEDNRKITPRDYLEIALRPVQGSGKDIKAKNEIRDSIRALFPDRECFTLVRPLNNENDLQ 280

Query: 121 RLDQISMDKLRPEFRAGLDALTKFVFERTRPKQVGATMMTGPVLVGITESYLDAINHGAV 180
           RLDQISMDKLR  FR GLD+LTKFVFERTRPKQVGATMMTGPVLVGITESYL A+N GAV
Sbjct: 281 RLDQISMDKLRTGFREGLDSLTKFVFERTRPKQVGATMMTGPVLVGITESYLKALNEGAV 340

Query: 181 PSISSSWQSVEEAERRRAYDSATEVYMSSFDRSIPPEEVALREAHEQAVQKSTAAFNASA 240
           P+ISSSWQSVEEAE  RAYDSAT+VYMSSFDRS PPEEVALREAHEQA QKS AAFNA A
Sbjct: 341 PTISSSWQSVEEAECHRAYDSATDVYMSSFDRSTPPEEVALREAHEQAKQKSMAAFNAIA 400

Query: 241 VGVGSARKKYAGLLQKFLKKAFEDYKKNAFMEADLQCSKAIQSMEKRLRA 290
           +GVGSARK Y GLL KF KKAFEDY+K+AFMEADLQCS AIQSMEKRLRA
Sbjct: 401 IGVGSARKTYEGLLLKFFKKAFEDYRKDAFMEADLQCSNAIQSMEKRLRA 450


>Glyma07g32290.1 
          Length = 1060

 Score =  551 bits (1419), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 261/290 (90%), Positives = 272/290 (93%)

Query: 1   MFVYNQMGGIDEAALDRLSLVTQMTKHIRVRASGGKSSASELGQFSPIFVWLLRDFYLDL 60
           MF+YNQMGGIDEA+LDRLSLVTQMTKHIRVRASGGK+SASELGQFSPIFVWLLRDFYLDL
Sbjct: 161 MFIYNQMGGIDEASLDRLSLVTQMTKHIRVRASGGKTSASELGQFSPIFVWLLRDFYLDL 220

Query: 61  TEDNRKITPRDYLELALRPVQGSGRDIAAKNEIRDSIRALFPDRECFTLVRPLNNENDLQ 120
           TEDNRKITPRDYLE+ALRPVQGSG+DI AKNEIRDSIRALFPDRECFTLVRPLNNENDLQ
Sbjct: 221 TEDNRKITPRDYLEIALRPVQGSGKDIKAKNEIRDSIRALFPDRECFTLVRPLNNENDLQ 280

Query: 121 RLDQISMDKLRPEFRAGLDALTKFVFERTRPKQVGATMMTGPVLVGITESYLDAINHGAV 180
           RLDQISMDKLR  FR GLDALTKFVFERTRPKQVGATMMTGPVLVGITESYL A+N GAV
Sbjct: 281 RLDQISMDKLRTGFREGLDALTKFVFERTRPKQVGATMMTGPVLVGITESYLKALNEGAV 340

Query: 181 PSISSSWQSVEEAERRRAYDSATEVYMSSFDRSIPPEEVALREAHEQAVQKSTAAFNASA 240
           P+ISSSWQSVEEAE  RAYDSAT+VYMSSFDRS PPEEVALREAHEQA QKS AAFNA A
Sbjct: 341 PTISSSWQSVEEAECHRAYDSATDVYMSSFDRSSPPEEVALREAHEQAKQKSMAAFNAIA 400

Query: 241 VGVGSARKKYAGLLQKFLKKAFEDYKKNAFMEADLQCSKAIQSMEKRLRA 290
           +GVGSARK Y  LL KF KKAFEDY+K+AFMEADLQCS AIQSMEKRLRA
Sbjct: 401 IGVGSARKTYEALLLKFFKKAFEDYRKDAFMEADLQCSNAIQSMEKRLRA 450


>Glyma07g32290.2 
          Length = 1034

 Score =  550 bits (1418), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 261/290 (90%), Positives = 272/290 (93%)

Query: 1   MFVYNQMGGIDEAALDRLSLVTQMTKHIRVRASGGKSSASELGQFSPIFVWLLRDFYLDL 60
           MF+YNQMGGIDEA+LDRLSLVTQMTKHIRVRASGGK+SASELGQFSPIFVWLLRDFYLDL
Sbjct: 161 MFIYNQMGGIDEASLDRLSLVTQMTKHIRVRASGGKTSASELGQFSPIFVWLLRDFYLDL 220

Query: 61  TEDNRKITPRDYLELALRPVQGSGRDIAAKNEIRDSIRALFPDRECFTLVRPLNNENDLQ 120
           TEDNRKITPRDYLE+ALRPVQGSG+DI AKNEIRDSIRALFPDRECFTLVRPLNNENDLQ
Sbjct: 221 TEDNRKITPRDYLEIALRPVQGSGKDIKAKNEIRDSIRALFPDRECFTLVRPLNNENDLQ 280

Query: 121 RLDQISMDKLRPEFRAGLDALTKFVFERTRPKQVGATMMTGPVLVGITESYLDAINHGAV 180
           RLDQISMDKLR  FR GLDALTKFVFERTRPKQVGATMMTGPVLVGITESYL A+N GAV
Sbjct: 281 RLDQISMDKLRTGFREGLDALTKFVFERTRPKQVGATMMTGPVLVGITESYLKALNEGAV 340

Query: 181 PSISSSWQSVEEAERRRAYDSATEVYMSSFDRSIPPEEVALREAHEQAVQKSTAAFNASA 240
           P+ISSSWQSVEEAE  RAYDSAT+VYMSSFDRS PPEEVALREAHEQA QKS AAFNA A
Sbjct: 341 PTISSSWQSVEEAECHRAYDSATDVYMSSFDRSSPPEEVALREAHEQAKQKSMAAFNAIA 400

Query: 241 VGVGSARKKYAGLLQKFLKKAFEDYKKNAFMEADLQCSKAIQSMEKRLRA 290
           +GVGSARK Y  LL KF KKAFEDY+K+AFMEADLQCS AIQSMEKRLRA
Sbjct: 401 IGVGSARKTYEALLLKFFKKAFEDYRKDAFMEADLQCSNAIQSMEKRLRA 450


>Glyma13g30780.1 
          Length = 1012

 Score =  545 bits (1403), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 252/290 (86%), Positives = 271/290 (93%)

Query: 1   MFVYNQMGGIDEAALDRLSLVTQMTKHIRVRASGGKSSASELGQFSPIFVWLLRDFYLDL 60
           MF+YNQMGGIDEAALDRLSLVTQMTKHIRVRASGG+SS SELGQFSPIFVWLLRDFYLDL
Sbjct: 106 MFIYNQMGGIDEAALDRLSLVTQMTKHIRVRASGGRSSTSELGQFSPIFVWLLRDFYLDL 165

Query: 61  TEDNRKITPRDYLELALRPVQGSGRDIAAKNEIRDSIRALFPDRECFTLVRPLNNENDLQ 120
            EDNRKITPRDYLE+ALRP QGSG+DI AKNEIRDSIRALFPDRECFTLVRPLN+ENDLQ
Sbjct: 166 VEDNRKITPRDYLEIALRPFQGSGKDITAKNEIRDSIRALFPDRECFTLVRPLNDENDLQ 225

Query: 121 RLDQISMDKLRPEFRAGLDALTKFVFERTRPKQVGATMMTGPVLVGITESYLDAINHGAV 180
           RLDQIS++KLRPEFR+ LD LTKFVFER RPKQVGATMMTGPVL+GITESYLDA+NHGAV
Sbjct: 226 RLDQISLEKLRPEFRSSLDTLTKFVFERARPKQVGATMMTGPVLIGITESYLDALNHGAV 285

Query: 181 PSISSSWQSVEEAERRRAYDSATEVYMSSFDRSIPPEEVALREAHEQAVQKSTAAFNASA 240
           P+ISSSWQSVEEAE R+AYDSA E+YMSSFD + PPEE ALREAHE+AV+ S AAF ASA
Sbjct: 286 PTISSSWQSVEEAECRKAYDSAAEIYMSSFDCTKPPEEAALREAHEKAVRISMAAFTASA 345

Query: 241 VGVGSARKKYAGLLQKFLKKAFEDYKKNAFMEADLQCSKAIQSMEKRLRA 290
           VGVGS R KY G+LQKFLKKAFEDYK+NA+MEADLQCS AIQSMEKRLRA
Sbjct: 346 VGVGSVRTKYEGMLQKFLKKAFEDYKRNAYMEADLQCSNAIQSMEKRLRA 395


>Glyma17g31830.1 
          Length = 263

 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/103 (47%), Positives = 61/103 (59%), Gaps = 16/103 (15%)

Query: 21  VTQMTKHIRVRASGGK-----SSASELGQ----FSPIFVWLLRDFYLDLTEDNRKITPRD 71
           VTQMTKHI+VR  GGK     S+ +++GQ     S   +     FYLDLT D +KITP D
Sbjct: 75  VTQMTKHIQVRELGGKTFGRLSTIAQIGQKCHNCSDGILAYFDYFYLDLTGDKKKITPLD 134

Query: 72  YLELALR-PVQGSGRDIAAKNEIRDSIRALFPDRECFTLVRPL 113
           YLE+AL   VQGS +DI AKNE      ALF     F++ + L
Sbjct: 135 YLEIALSWHVQGSQKDIKAKNE------ALFCSLFYFSIFKAL 171


>Glyma10g03660.1 
          Length = 659

 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/291 (21%), Positives = 121/291 (41%), Gaps = 37/291 (12%)

Query: 10  IDEAALDRLSLVTQMTKHIRVRASGGKSSASELGQFSPI-FVWLL-RDFYLD------LT 61
           I EA + RLS   ++ +    R  G   +      F P   +WL+ RDF         + 
Sbjct: 210 IREADISRLSFAVELAEEFYGRVKGQDVA------FEPAKLLWLIQRDFLQGKSVQEMVN 263

Query: 62  EDNRKITPRD----YLELALRPVQGSGRDIAAKNEIRDSIRALFPDRECFTLVRPLNNEN 117
           E  R++   D    + +L ++         +  N+IRDS+  +  +   F+L +P     
Sbjct: 264 EALRRVPNTDGLYQFFQLCMK------FTFSTVNQIRDSLAVMGDNSTAFSLPQPHIQRT 317

Query: 118 DLQRLDQISMDKLRPEFRAGLDALTKFVFERTRPKQVGATMMTGPVLVGITESYLDAINH 177
            L  ++ + +D+L  + R  L  L   +     PK V    + G   V   E  L+A+N 
Sbjct: 318 KLCDMEDVELDQLYVKRREQLKELVASIIT---PKIVQGKTLNGKEFVSFLEQILEALNK 374

Query: 178 GAVPSISSSWQSVEEAERRRAYDSATEVYMSSFDRSI-PPEEVALREAHEQAVQKSTAAF 236
           G +PS      S+ E   +   +   ++Y     + + P  E +L+ AH+++  + T  F
Sbjct: 375 GEIPSTG----SLVEVFNKNILEKCLKLYSEKMAKLVLPLPEESLQGAHDRSRDEVTKVF 430

Query: 237 NASAVGVGSARKKYAGLLQKFLKKAFEDYKKNAFMEADLQCSKAIQSMEKR 287
           +    G   A+K +       L +  +   KN  ++ + Q S+  +++  R
Sbjct: 431 DQQHFGRHHAKKSFMQ-----LDEEIQQVYKNVVLQNEYQSSRLCEALYTR 476


>Glyma02g16130.1 
          Length = 709

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 13/198 (6%)

Query: 91  NEIRDSIRALFPDRECFTLVRPLNNENDLQRLDQISMDKLRPEFRAGLDALTKFVFERTR 150
           N+IRDS+  +  +   F+L +P      L  +  + +D+L  + R   + L K V     
Sbjct: 341 NQIRDSLAIMGDNSTAFSLPQPHIQRTKLCDMKDVELDQLYVKRR---EQLKKLVASIIT 397

Query: 151 PKQVGATMMTGPVLVGITESYLDAINHGAVPSISSSWQSVEEAERRRAYDSATEVYMSSF 210
           PK V    + G   V   E  L+A+N G +PS      S+ E   +   +   ++Y    
Sbjct: 398 PKIVQGKTLNGKEFVSFLEQILEALNKGEIPSTG----SLVEVFNKNILEKCLKLYSEKM 453

Query: 211 DRSI-PPEEVALREAHEQAVQKSTAAFNASAVGVGSARKKYAGLLQKFLKKAFEDYKKNA 269
            + + P  E +L+ AH+++  + T  F+    G   A+K +       L +  +   KN 
Sbjct: 454 AKLVLPLPEKSLQGAHDRSRDEVTKVFDQQHFGRHHAKKSFMQ-----LDEEIQQVYKNV 508

Query: 270 FMEADLQCSKAIQSMEKR 287
            ++ + Q S+  +++  R
Sbjct: 509 VLQNEYQSSRLCEALYTR 526