Miyakogusa Predicted Gene
- Lj0g3v0345909.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0345909.1 Non Chatacterized Hit- tr|B7FJB0|B7FJB0_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,89.24,0,Cyclin,Cyclin PHO80-like; no description,Cyclin-like;
Cyclin-like,Cyclin-like; SUBFAMILY NOT NAMED,N,CUFF.23726.1
(224 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma01g32920.1 392 e-109
Glyma03g03990.1 384 e-107
Glyma03g25640.1 154 5e-38
Glyma18g48330.1 153 1e-37
Glyma09g38070.1 153 2e-37
Glyma07g13200.1 152 3e-37
Glyma12g32200.1 133 2e-31
Glyma03g31030.1 132 3e-31
Glyma19g33860.1 129 2e-30
Glyma19g42390.1 127 1e-29
Glyma11g17150.1 116 2e-26
Glyma16g09060.1 95 5e-20
Glyma02g30710.1 94 8e-20
Glyma13g38270.1 94 1e-19
Glyma03g31030.2 82 5e-16
Glyma03g39830.1 51 8e-07
>Glyma01g32920.1
Length = 224
Score = 392 bits (1006), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/224 (90%), Positives = 215/224 (95%)
Query: 1 MASSSSLTISPRKLRSDLYSYSYQEDSSTPLVINVLASLIERSMARTERIVKNCSKSLSK 60
MASSS+LTISPRKLR DLYSYSY+EDS+TPLVINVLASLIERSMART+RIVKNCS +LSK
Sbjct: 1 MASSSTLTISPRKLRYDLYSYSYKEDSNTPLVINVLASLIERSMARTQRIVKNCSNALSK 60
Query: 61 AISTNIFDCREIPDMTIQSYLERIFRYTRAGPSVYVVAYVYIDRFCQNNPGFRINTRNVH 120
ISTNIFDCREIPDMTI+SYLERIFRYTRAGPSVYVVAYVYIDRFCQNNPGFRINTRNVH
Sbjct: 61 VISTNIFDCREIPDMTIESYLERIFRYTRAGPSVYVVAYVYIDRFCQNNPGFRINTRNVH 120
Query: 121 RLLITTIMVASKYVEDLNYRNSYFGRVGGLTTNEVNKLELEFLFLMGFKLHVNVSIFESY 180
RLLITTIMVASKYVED+N+RNSYF RVGGL TNE+N+LELEFLFLMGFKLHVNVS+FESY
Sbjct: 121 RLLITTIMVASKYVEDMNFRNSYFARVGGLRTNELNELELEFLFLMGFKLHVNVSVFESY 180
Query: 181 CCHLEREVSIGGGYHIERTLRCAEEIKTRHREERGYTLIARVML 224
CCHLEREVSIGGGYHIERTLRCAEEIK ++ EERGYT I RVML
Sbjct: 181 CCHLEREVSIGGGYHIERTLRCAEEIKAKNIEERGYTQITRVML 224
>Glyma03g03990.1
Length = 224
Score = 384 bits (987), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/224 (89%), Positives = 213/224 (95%)
Query: 1 MASSSSLTISPRKLRSDLYSYSYQEDSSTPLVINVLASLIERSMARTERIVKNCSKSLSK 60
M S SS+TISPRKLR DLYSYSY+EDS+TPLVINVLASLIERSMART+RIVKNCS SLSK
Sbjct: 1 MTSCSSITISPRKLRYDLYSYSYKEDSNTPLVINVLASLIERSMARTQRIVKNCSNSLSK 60
Query: 61 AISTNIFDCREIPDMTIQSYLERIFRYTRAGPSVYVVAYVYIDRFCQNNPGFRINTRNVH 120
AISTNIFDCREIPD+TIQSYLERIFRYTRAGPSVYVVAYVYIDRFCQNNPGFRIN RNVH
Sbjct: 61 AISTNIFDCREIPDLTIQSYLERIFRYTRAGPSVYVVAYVYIDRFCQNNPGFRINARNVH 120
Query: 121 RLLITTIMVASKYVEDLNYRNSYFGRVGGLTTNEVNKLELEFLFLMGFKLHVNVSIFESY 180
RLLITTIMVASKYVED+N+RNSYF RVGGLTTNE+N+LELEFLF+MGFKLHVNVS+FESY
Sbjct: 121 RLLITTIMVASKYVEDMNFRNSYFARVGGLTTNELNELELEFLFMMGFKLHVNVSVFESY 180
Query: 181 CCHLEREVSIGGGYHIERTLRCAEEIKTRHREERGYTLIARVML 224
CCHLEREVSIGGGYHIERTLRCAEEIK ++ E RGYT I RVML
Sbjct: 181 CCHLEREVSIGGGYHIERTLRCAEEIKAKNIEGRGYTQITRVML 224
>Glyma03g25640.1
Length = 209
Score = 154 bits (390), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 74/165 (44%), Positives = 109/165 (66%), Gaps = 5/165 (3%)
Query: 24 QEDSSTPLVINVLASLIERSMARTERIVKNCSKSLSKAISTNIFDCREIPDMTIQSYLER 83
+ S P VI L SL+ER + ++ L + ++F P+++IQ YLER
Sbjct: 7 ESPSVMPKVITFLCSLLERVAESNDH-----NQHLQQHQKISVFHGLTRPNISIQCYLER 61
Query: 84 IFRYTRAGPSVYVVAYVYIDRFCQNNPGFRINTRNVHRLLITTIMVASKYVEDLNYRNSY 143
IF+Y PS +VVAYVY+DRF Q P IN+ NVHRLLIT++MVA+K+++D+ Y N++
Sbjct: 62 IFKYANCSPSCFVVAYVYLDRFTQRQPSLPINSFNVHRLLITSVMVAAKFMDDMFYNNAH 121
Query: 144 FGRVGGLTTNEVNKLELEFLFLMGFKLHVNVSIFESYCCHLEREV 188
+ +VGG+T E+N LEL+FLF +GF L+V F++YC HL+RE+
Sbjct: 122 YAKVGGITKVEMNFLELDFLFGLGFHLNVTPGTFQAYCVHLQREM 166
>Glyma18g48330.1
Length = 205
Score = 153 bits (386), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 112/159 (70%), Gaps = 5/159 (3%)
Query: 30 PLVINVLASLIERSMARTERIVKNCSKSLSKAISTNIFDCREIPDMTIQSYLERIFRYTR 89
P +I+ L+SL++R +A + + N + L + +S +F P ++IQSYLERIF+Y
Sbjct: 11 PKLISFLSSLLKR-VAESNDL--NQQQLLHQKVS--VFHGLTRPTISIQSYLERIFKYAN 65
Query: 90 AGPSVYVVAYVYIDRFCQNNPGFRINTRNVHRLLITTIMVASKYVEDLNYRNSYFGRVGG 149
PS ++VAYVY+DRF Q P IN NVHRLLIT++MVA+K+++DL Y N+Y+ +VGG
Sbjct: 66 CSPSCFIVAYVYLDRFTQRQPSLPINFFNVHRLLITSVMVAAKFMDDLYYNNAYYAKVGG 125
Query: 150 LTTNEVNKLELEFLFLMGFKLHVNVSIFESYCCHLEREV 188
+TT E+N LE++FLF +GF L+V F++YC HL+ E+
Sbjct: 126 ITTIEMNFLEVDFLFGLGFHLNVTPGTFQAYCAHLQSEM 164
>Glyma09g38070.1
Length = 188
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 113/159 (71%), Gaps = 5/159 (3%)
Query: 30 PLVINVLASLIERSMARTERIVKNCSKSLSKAISTNIFDCREIPDMTIQSYLERIFRYTR 89
P +I+ L+SL++R +A + + N + + + +S +F P ++IQSYLERIF+Y
Sbjct: 11 PKLISFLSSLLKR-VAESNDL--NQQQLIHQKVS--VFHGLTRPTISIQSYLERIFKYAN 65
Query: 90 AGPSVYVVAYVYIDRFCQNNPGFRINTRNVHRLLITTIMVASKYVEDLNYRNSYFGRVGG 149
PS ++VAYVY+DRF Q P IN+ NVHRLLIT++MVA+K+++DL Y N+Y+ +VGG
Sbjct: 66 CSPSCFIVAYVYLDRFTQRQPSLPINSFNVHRLLITSVMVAAKFMDDLYYNNAYYAKVGG 125
Query: 150 LTTNEVNKLELEFLFLMGFKLHVNVSIFESYCCHLEREV 188
+TT E+N LE++FLF +GF L+V F++YC HL+ E+
Sbjct: 126 ITTIEMNFLEVDFLFGLGFHLNVTPGTFQAYCAHLQSEM 164
>Glyma07g13200.1
Length = 202
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 108/165 (65%), Gaps = 8/165 (4%)
Query: 24 QEDSSTPLVINVLASLIERSMARTERIVKNCSKSLSKAISTNIFDCREIPDMTIQSYLER 83
+ S P VI L+SL+ER V + + ++F P+++I SYLER
Sbjct: 5 ESPSVMPKVITFLSSLLER--------VAESNDHNQQHQKISVFHGLTRPNISIHSYLER 56
Query: 84 IFRYTRAGPSVYVVAYVYIDRFCQNNPGFRINTRNVHRLLITTIMVASKYVEDLNYRNSY 143
IF+Y PS +VVAYVY+DRF Q P INT NVHRLLIT++MVA+K+++D+ Y N+Y
Sbjct: 57 IFKYANCSPSCFVVAYVYLDRFTQRQPSLPINTFNVHRLLITSVMVAAKFMDDMYYNNAY 116
Query: 144 FGRVGGLTTNEVNKLELEFLFLMGFKLHVNVSIFESYCCHLEREV 188
+ +VGG+T E+N LEL+FLF +GF L+V F++YC +L+RE+
Sbjct: 117 YAKVGGITKIEMNFLELDFLFGLGFHLNVTPGTFQAYCVNLQREM 161
>Glyma12g32200.1
Length = 232
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 123/190 (64%), Gaps = 11/190 (5%)
Query: 30 PLVINVLASLIERSMARTERIVKNCSKSLSK--------AISTNIFDCREIPDMTIQSYL 81
P V+ VL+S++E+ +AR E+++ S+ L S N F P ++I YL
Sbjct: 26 PRVLCVLSSMLEKLVARNEKLIDILSQELDGLNSGSVRLGNSLNTFHGVRAPSISIPKYL 85
Query: 82 ERIFRYTRAGPSVYVVAYVYIDRFCQNNPGFRINTRNVHRLLITTIMVASKYVEDLNYRN 141
ERI++YT PS +VV YVYIDR +P + + NVHRLL+T++MVASK ++D +Y N
Sbjct: 86 ERIYKYTNCSPSCFVVGYVYIDRLTHRHPDSLVTSLNVHRLLVTSVMVASKMLDDEHYNN 145
Query: 142 SYFGRVGGLTTNEVNKLELEFLFLMGFKLHVNVSIFESYCCHLEREVSIGG-GYHIERTL 200
+ + RVGG++ E+NKLELE LFL+ F++ V+ +FESYC HLE+E+ + G G IER L
Sbjct: 146 AIYARVGGVSNAELNKLELELLFLLDFRVMVSSRVFESYCFHLEKEMVVNGTGMKIERAL 205
Query: 201 --RCAEEIKT 208
+ ++++T
Sbjct: 206 TPKAMDDLET 215
>Glyma03g31030.1
Length = 217
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 126/189 (66%), Gaps = 9/189 (4%)
Query: 5 SSLTISPRKLRSDLY-SYSYQEDS---STPLVINVLASLIERSMARTERIVKNCSKSLSK 60
+SL + + SD+Y S +E P V+++L+SL+ERS+ R E +++ +K +
Sbjct: 2 ASLALETEDVISDIYLSLGLKESDKGVGVPRVLSLLSSLLERSVQRNETLLE--AKHVKD 59
Query: 61 AISTNIFDCREIPDMTIQSYLERIFRYTRAGPSVYVVAYVYIDRFCQNNPGFRINTRNVH 120
++ +F P ++++ Y++RIF+Y+ PS +VVA++Y+DRF Q+ ++ + NVH
Sbjct: 60 VVT--VFHGLRAPTLSVRKYIDRIFKYSGCSPSCFVVAHIYVDRFIQHTE-IKLTSLNVH 116
Query: 121 RLLITTIMVASKYVEDLNYRNSYFGRVGGLTTNEVNKLELEFLFLMGFKLHVNVSIFESY 180
RLLIT+IM+A+K+++D Y N+Y+ +VGG++T+E+N+LE+ FLF + F+L +V F Y
Sbjct: 117 RLLITSIMLAAKFIDDAFYNNAYYAKVGGVSTSELNRLEMSFLFGIDFRLQFSVDTFGRY 176
Query: 181 CCHLEREVS 189
C LE+E +
Sbjct: 177 CRQLEKEAA 185
>Glyma19g33860.1
Length = 246
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 123/189 (65%), Gaps = 9/189 (4%)
Query: 5 SSLTISPRKLRSDLY-SYSYQEDS---STPLVINVLASLIERSMARTERIVKNCSKSLSK 60
SL + + SD+Y S +E P V+++L+SL+ERS+ R E ++ +K +
Sbjct: 31 GSLALETEDVISDIYLSLGLKESDKGVGGPRVLSLLSSLLERSVQRNETSLE--AKHIKD 88
Query: 61 AISTNIFDCREIPDMTIQSYLERIFRYTRAGPSVYVVAYVYIDRFCQNNPGFRINTRNVH 120
++ +F P ++++ Y++RIF+Y+ PS +VVA++Y+DRF Q+ ++ + NVH
Sbjct: 89 VVT--VFHGLRAPTLSVRKYIDRIFKYSGCSPSCFVVAHIYVDRFIQHTE-IKLTSLNVH 145
Query: 121 RLLITTIMVASKYVEDLNYRNSYFGRVGGLTTNEVNKLELEFLFLMGFKLHVNVSIFESY 180
RLLIT+IM+A+K+++D Y N+Y+ +VGG++T+E+N+ E+ FLF + F+L V V F Y
Sbjct: 146 RLLITSIMLAAKFIDDAFYNNAYYAKVGGVSTSELNRFEMSFLFGIDFRLQVGVETFGRY 205
Query: 181 CCHLEREVS 189
C LE+E +
Sbjct: 206 CRQLEKEAA 214
>Glyma19g42390.1
Length = 149
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 100/152 (65%), Gaps = 4/152 (2%)
Query: 29 TPLVINVLASLIERSMARTERIVKNCSKSLSKAISTNIFDCREIPDMTIQSYLERIFRYT 88
TPLV+ L+S ERS+ + E+++ K K IF + P++++ Y+ERI +Y+
Sbjct: 1 TPLVLLNLSSNWERSILKNEKLLLTTRK---KNDPVTIFHGSKAPNLSVTHYMERILKYS 57
Query: 89 RAGPSVYVVAYVYIDRFCQNNPGFRINTRNVHRLLITTIMVASKYVEDLNYRNSYFGRVG 148
PS +V+A +Y+DRF Q G+ + + N HRLLIT++MVA K+++D Y N+Y+ +VG
Sbjct: 58 HCSPSCFVIAQIYMDRFFQKKGGY-LTSFNAHRLLITSVMVAVKFLDDKYYSNAYYAKVG 116
Query: 149 GLTTNEVNKLELEFLFLMGFKLHVNVSIFESY 180
G++T E+N++ELEFLF + F+L V +F Y
Sbjct: 117 GVSTEEMNRMELEFLFNLEFRLFVTTELFLKY 148
>Glyma11g17150.1
Length = 59
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/59 (91%), Positives = 56/59 (94%)
Query: 166 MGFKLHVNVSIFESYCCHLEREVSIGGGYHIERTLRCAEEIKTRHREERGYTLIARVML 224
M FKLHVNVS+FESYCCHLEREVSIGGGYHIERTLRCAEEIK +HREERGYT IARVML
Sbjct: 1 MDFKLHVNVSVFESYCCHLEREVSIGGGYHIERTLRCAEEIKAKHREERGYTHIARVML 59
>Glyma16g09060.1
Length = 154
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 53/65 (81%)
Query: 73 PDMTIQSYLERIFRYTRAGPSVYVVAYVYIDRFCQNNPGFRINTRNVHRLLITTIMVASK 132
P+++IQSYLERIF+Y PS +VVAYVY+DRF Q P INT NVHRLLIT++MVA+K
Sbjct: 34 PNISIQSYLERIFKYANCNPSCFVVAYVYLDRFTQRQPSLPINTFNVHRLLITSVMVAAK 93
Query: 133 YVEDL 137
+++D+
Sbjct: 94 FMDDM 98
>Glyma02g30710.1
Length = 98
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 68/106 (64%), Gaps = 8/106 (7%)
Query: 32 VINVLASLIERSMARTERIVKNCSKSLSKAISTNIFDCREIPDMTIQSYLERIFRYTRAG 91
+I L+SL+ER V + + ++F P+++IQSYLERIF+Y
Sbjct: 1 MIAFLSSLLER--------VAESNDHNQQHQKISVFHGLTRPNISIQSYLERIFKYANCS 52
Query: 92 PSVYVVAYVYIDRFCQNNPGFRINTRNVHRLLITTIMVASKYVEDL 137
PS +VVAYVY+DRF Q P INT NVHRLLIT++MVA+K+++D+
Sbjct: 53 PSCFVVAYVYLDRFTQRQPSLPINTFNVHRLLITSVMVAAKFMDDM 98
>Glyma13g38270.1
Length = 141
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 77/131 (58%), Gaps = 13/131 (9%)
Query: 19 YSYSYQEDSST-----PLVINVLASLIERSMARTERIVKNCSKSLSK--------AISTN 65
+S+ Q ++S P V+ +L+S++E+ +AR E++V S+ L S N
Sbjct: 10 HSWPLQPETSLTELNLPRVLCILSSMLEKLVARNEKLVDILSQQLDGLNCGSVRLGNSLN 69
Query: 66 IFDCREIPDMTIQSYLERIFRYTRAGPSVYVVAYVYIDRFCQNNPGFRINTRNVHRLLIT 125
F P ++I YLERI++YT PS +VV YVYIDR +P + + NVHRLL+T
Sbjct: 70 TFHGVRAPSISIPKYLERIYKYTNCSPSCFVVGYVYIDRLTHRHPDSLVTSLNVHRLLVT 129
Query: 126 TIMVASKYVED 136
++MVASK ++D
Sbjct: 130 SVMVASKMLDD 140
>Glyma03g31030.2
Length = 148
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 90/137 (65%), Gaps = 9/137 (6%)
Query: 5 SSLTISPRKLRSDLY-SYSYQEDS---STPLVINVLASLIERSMARTERIVKNCSKSLSK 60
+SL + + SD+Y S +E P V+++L+SL+ERS+ R E +++ +K +
Sbjct: 2 ASLALETEDVISDIYLSLGLKESDKGVGVPRVLSLLSSLLERSVQRNETLLE--AKHVKD 59
Query: 61 AISTNIFDCREIPDMTIQSYLERIFRYTRAGPSVYVVAYVYIDRFCQNNPGFRINTRNVH 120
++ +F P ++++ Y++RIF+Y+ PS +VVA++Y+DRF Q+ ++ + NVH
Sbjct: 60 VVT--VFHGLRAPTLSVRKYIDRIFKYSGCSPSCFVVAHIYVDRFIQHTE-IKLTSLNVH 116
Query: 121 RLLITTIMVASKYVEDL 137
RLLIT+IM+A+K+++D+
Sbjct: 117 RLLITSIMLAAKFIDDI 133
>Glyma03g39830.1
Length = 101
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%)
Query: 126 TIMVASKYVEDLNYRNSYFGRVGGLTTNEVNKLELEFLFLMGFKLHVNVSIFESYCCHLE 185
T+++ + + + N+Y+ RVGG+ T E+N++ELE LF + F+L V +F YC L+
Sbjct: 40 TLLIFNINYHQMYHSNAYYARVGGVITEEMNRMELEILFNLEFRLFVTTDLFLKYCGKLD 99
Query: 186 R 186
R
Sbjct: 100 R 100