Miyakogusa Predicted Gene

Lj0g3v0345899.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0345899.1 tr|G7LH32|G7LH32_MEDTR Microfibrillar-associated
protein OS=Medicago truncatula GN=MTR_8g083140
PE=4,59.76,1.4013e-45,Prp19_bind,Micro-fibrillar-associated protein 1,
C-terminal; coiled-coil,NULL; seg,NULL; SUBFAMILY N,CUFF.23725.1
         (195 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g11430.1                                                       114   9e-26
Glyma05g28420.1                                                       113   1e-25

>Glyma08g11430.1 
          Length = 440

 Score =  114 bits (284), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 64/131 (48%), Positives = 76/131 (58%), Gaps = 12/131 (9%)

Query: 39  AWKVXXXXXXXXXXXXXXXXLKEKQETQRLRNMSEEERIREWQIRXXXXXXXXXXXXXWR 98
           AWKV                LKEK+E +++RNM+EEER    +               WR
Sbjct: 266 AWKVREIGRIKRDREDREAMLKEKEEIEKVRNMTEEERR---EWERRNPKPAPPPKQKWR 322

Query: 99  FMQRYYHSGAFFQDQLDT---------IMLHDFSAPTGQDKMDKTILPSVMQVKRFGLRG 149
           FMQ+YYH GAFFQ++ D          I   DFSAPTG+DKMDKTILP VMQVK FG  G
Sbjct: 323 FMQKYYHKGAFFQNESDDRAATVGSDGIFARDFSAPTGEDKMDKTILPKVMQVKHFGRSG 382

Query: 150 RSKWTHLINED 160
           R+KWTHL+NED
Sbjct: 383 RTKWTHLVNED 393


>Glyma05g28420.1 
          Length = 436

 Score =  113 bits (283), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 64/131 (48%), Positives = 76/131 (58%), Gaps = 12/131 (9%)

Query: 39  AWKVXXXXXXXXXXXXXXXXLKEKQETQRLRNMSEEERIREWQIRXXXXXXXXXXXXXWR 98
           AWKV                LKEK+E +++RNM+EEER    +               WR
Sbjct: 265 AWKVREIGRIKRDREDREAMLKEKEEIEKVRNMTEEERR---EWERRNPKPAPPPKQKWR 321

Query: 99  FMQRYYHSGAFFQDQLDT---------IMLHDFSAPTGQDKMDKTILPSVMQVKRFGLRG 149
           FMQ+YYH GAFFQ++ D          I   DFSAPTG+DKMDKTILP VMQVK FG  G
Sbjct: 322 FMQKYYHKGAFFQNESDDRAATVGSDGIFARDFSAPTGEDKMDKTILPKVMQVKHFGRSG 381

Query: 150 RSKWTHLINED 160
           R+KWTHL+NED
Sbjct: 382 RTKWTHLVNED 392