Miyakogusa Predicted Gene

Lj0g3v0345299.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0345299.1 Non Chatacterized Hit- tr|J3LQI0|J3LQI0_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB03G3,27.47,8e-19,DEAD,DNA/RNA helicase, DEAD/DEAH box type,
N-terminal; HELICASE-RELATED,NULL; P-loop containing
nucl,gene.g27047.t1.1
         (299 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g42290.2                                                        98   1e-20
Glyma03g42290.1                                                        98   1e-20
Glyma19g45060.2                                                        98   1e-20
Glyma19g45060.1                                                        98   1e-20
Glyma09g02930.1                                                        97   2e-20
Glyma09g02920.1                                                        96   6e-20
Glyma15g13890.1                                                        95   1e-19
Glyma17g11240.1                                                        86   3e-17
Glyma13g22450.1                                                        83   3e-16
Glyma06g06060.1                                                        75   6e-14
Glyma04g06060.1                                                        72   1e-12
Glyma11g27810.1                                                        66   3e-11

>Glyma03g42290.2 
          Length = 1913

 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/115 (41%), Positives = 72/115 (62%), Gaps = 1/115 (0%)

Query: 1   MLIKDIAQAIKSSGKKKLIIVLAPIVHLVHQLYNDLKHHTGFQVEEYYGR-GVDEWNLKT 59
           +LIK I  +++   KK L + L P V LV+Q    ++  TG+QV  Y G  G D W+ + 
Sbjct: 293 LLIKSIQDSLQKQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDARR 352

Query: 60  WEKEVSENDVLVMTPQILLNALTKAFLKVEMISLMVIDECHNATGNHPYARIMKD 114
           W++E     VLVMT QILLN L  + +K+E I+L+++DECH+A   HPY+ +M +
Sbjct: 353 WQREFDTKHVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSE 407


>Glyma03g42290.1 
          Length = 1913

 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/115 (41%), Positives = 72/115 (62%), Gaps = 1/115 (0%)

Query: 1   MLIKDIAQAIKSSGKKKLIIVLAPIVHLVHQLYNDLKHHTGFQVEEYYGR-GVDEWNLKT 59
           +LIK I  +++   KK L + L P V LV+Q    ++  TG+QV  Y G  G D W+ + 
Sbjct: 293 LLIKSIQDSLQKQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDARR 352

Query: 60  WEKEVSENDVLVMTPQILLNALTKAFLKVEMISLMVIDECHNATGNHPYARIMKD 114
           W++E     VLVMT QILLN L  + +K+E I+L+++DECH+A   HPY+ +M +
Sbjct: 353 WQREFDTKHVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSE 407


>Glyma19g45060.2 
          Length = 1902

 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/115 (41%), Positives = 72/115 (62%), Gaps = 1/115 (0%)

Query: 1   MLIKDIAQAIKSSGKKKLIIVLAPIVHLVHQLYNDLKHHTGFQVEEYYGR-GVDEWNLKT 59
           +LIK I +++    KK L + L P V LV+Q    ++  TG+QV  Y G  G D W+ + 
Sbjct: 282 LLIKSIQESLHKQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDARR 341

Query: 60  WEKEVSENDVLVMTPQILLNALTKAFLKVEMISLMVIDECHNATGNHPYARIMKD 114
           W++E     VLVMT QILLN L  + +K+E I+L+++DECH+A   HPY+ +M +
Sbjct: 342 WQREFDTKHVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSE 396


>Glyma19g45060.1 
          Length = 1902

 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/115 (41%), Positives = 72/115 (62%), Gaps = 1/115 (0%)

Query: 1   MLIKDIAQAIKSSGKKKLIIVLAPIVHLVHQLYNDLKHHTGFQVEEYYGR-GVDEWNLKT 59
           +LIK I +++    KK L + L P V LV+Q    ++  TG+QV  Y G  G D W+ + 
Sbjct: 282 LLIKSIQESLHKQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDARR 341

Query: 60  WEKEVSENDVLVMTPQILLNALTKAFLKVEMISLMVIDECHNATGNHPYARIMKD 114
           W++E     VLVMT QILLN L  + +K+E I+L+++DECH+A   HPY+ +M +
Sbjct: 342 WQREFDTKHVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSE 396


>Glyma09g02930.1 
          Length = 1414

 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 48/115 (41%), Positives = 73/115 (63%), Gaps = 2/115 (1%)

Query: 1   MLIKDIAQAIKSSGKKKLIIVLAPIVHLVHQLYNDLKHHTGFQVEEYYG-RGVDEWNLKT 59
           ML++  A  ++    + + + L P V LV Q    +K HT  +V  Y+G  G+D W+  T
Sbjct: 60  MLLRSYAHHLRKPSPQ-IAVFLVPKVVLVSQQAEAVKKHTDLKVGLYWGDMGIDFWDAAT 118

Query: 60  WEKEVSENDVLVMTPQILLNALTKAFLKVEMISLMVIDECHNATGNHPYARIMKD 114
           W++EV + +V VMTP ILLN L  +FLK+ +I ++++DECH+A G HPYA IM +
Sbjct: 119 WKQEVQKYEVFVMTPAILLNCLRHSFLKLNLIKVLIMDECHHARGKHPYASIMTE 173


>Glyma09g02920.1 
          Length = 1305

 Score = 95.5 bits (236), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 48/115 (41%), Positives = 74/115 (64%), Gaps = 2/115 (1%)

Query: 1   MLIKDIAQAIKSSGKKKLIIVLAPIVHLVHQLYNDLKHHTGFQVEEYYG-RGVDEWNLKT 59
           ML++  A  ++      + + L P V LV Q    +K HT  +V  Y+G  GVD W+  T
Sbjct: 1   MLLRSYAHQLRKPSPY-IAVFLVPQVVLVSQQAEAVKRHTDLKVGMYWGDMGVDFWDAAT 59

Query: 60  WEKEVSENDVLVMTPQILLNALTKAFLKVEMISLMVIDECHNATGNHPYARIMKD 114
           W++E+ +++VLVMTP ILL+ L  +F K+ MI+++++DECH+A G HPYA IM +
Sbjct: 60  WKQEMEKHEVLVMTPAILLSCLRHSFFKLNMINVLIMDECHHARGKHPYACIMTE 114


>Glyma15g13890.1 
          Length = 285

 Score = 94.7 bits (234), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 48/113 (42%), Positives = 73/113 (64%), Gaps = 2/113 (1%)

Query: 1   MLIKDIAQAIKSSGKKKLIIVLAPIVHLVHQLYNDLKHHTGFQVEEYYG-RGVDEWNLKT 59
           ML++  A  ++    + + + L P V LV Q    +K HT  +V  ++G  GVD W+  T
Sbjct: 58  MLLRSYAHHLRKPSPQ-ISVFLVPQVVLVSQQAEAVKKHTDLKVGMFWGDMGVDFWDATT 116

Query: 60  WEKEVSENDVLVMTPQILLNALTKAFLKVEMISLMVIDECHNATGNHPYARIM 112
           W++EV +++V VMTP ILLN L  +FLK+ +I ++++DECH+A G HPYA IM
Sbjct: 117 WKQEVEKHEVFVMTPAILLNCLRHSFLKLNLIKVLIMDECHHARGKHPYACIM 169


>Glyma17g11240.1 
          Length = 1679

 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 45/101 (44%), Positives = 63/101 (62%), Gaps = 2/101 (1%)

Query: 15  KKKLIIVLAPIVHLVHQLYNDLKHHTGFQVEEYYGRGVDEWNLKTWEKEVSENDVLVMTP 74
           +K + + LAP V LVHQ    +   T F+V  Y G        + WE+E+ + +VLVMTP
Sbjct: 79  QKNICVFLAPTVALVHQQAKVIADSTNFKVGTYCGSSKRLKRHQDWEQEIGQYEVLVMTP 138

Query: 75  QILLNALTKAFLKVEMISLMVIDECHNAT--GNHPYARIMK 113
           QILL+ L+  F+ +EMI+L++ DECH+A    NH YA IMK
Sbjct: 139 QILLHNLSHCFITMEMIALLIFDECHHAQVKSNHAYAVIMK 179


>Glyma13g22450.1 
          Length = 1394

 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 46/115 (40%), Positives = 70/115 (60%), Gaps = 3/115 (2%)

Query: 1   MLIKDIAQAIKSSGKKKLIIVLAPIVHLVHQLYNDLKHHTGFQVEEYYGRGVDEWNLKTW 60
           +L+ ++   I+   +K + + LAP V LVHQ    +   T F+V  Y G      + + W
Sbjct: 21  LLMHEMGDLIRKP-QKNICVFLAPTVALVHQQAKVIADSTDFKVGTYCGSSKRLKHHQDW 79

Query: 61  EKEVSENDVLVMTPQILLNALTKAFLKVEMISLMVIDECHNAT--GNHPYARIMK 113
           E+E+ + +VLVMTPQIL + L+  F+ +EMI+L++ DECH+A    NH YA IMK
Sbjct: 80  EQEMGQYEVLVMTPQILHHNLSHCFITMEMIALLIFDECHHAQVKSNHAYAVIMK 134


>Glyma06g06060.1 
          Length = 468

 Score = 75.5 bits (184), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 49/110 (44%), Positives = 66/110 (60%), Gaps = 13/110 (11%)

Query: 12  SSGKKKLIIVLAPIVHLVHQL----YNDLKHHTGFQVEEYYG-RGVDEWNLKTWEKEVSE 66
           +SG KKLI+ LAP VHLV+Q     + ++K  T FQVEEYYG +GVD W+LK WEK +S 
Sbjct: 29  TSGVKKLILFLAPTVHLVNQACYTQFKNMKFLTDFQVEEYYGAKGVDTWSLKMWEKVISN 88

Query: 67  NDVLVMTPQILLNALTKAFLKVEMISLMVIDECHNATGNHPYARIMKDPI 116
           NDV ++   +L++ LT  F  V   +   ID C    G  P A  ++  I
Sbjct: 89  NDVCLLF-NLLIDCLT--FFAV---AFTFIDLCSIVLG--PMAFTLRSLI 130


>Glyma04g06060.1 
          Length = 1530

 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 31/42 (73%), Positives = 36/42 (85%)

Query: 72  MTPQILLNALTKAFLKVEMISLMVIDECHNATGNHPYARIMK 113
           MTPQILL+AL KAFL++EMI L+VIDECH   GNHPY +IMK
Sbjct: 1   MTPQILLDALRKAFLRMEMICLIVIDECHRTIGNHPYTKIMK 42


>Glyma11g27810.1 
          Length = 249

 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 2/80 (2%)

Query: 36  LKHHTGFQVEEYYGR-GVDEWNLKTWEKEVSENDVLVMTPQILLNALTKAFLKVEMISLM 94
           ++  TG+QV  Y G  G D W+ + W +E     VLVMT QILLN L  + +K+E I+L+
Sbjct: 68  IRERTGYQVGHYCGEIGQDFWDARRWLREFDTKHVLVMTAQILLNILRNSIIKMEAINLL 127

Query: 95  VIDECHNATGNHPYARIMKD 114
           ++ EC +A   HPY+ +M +
Sbjct: 128 IL-ECLHAMKKHPYSLVMSE 146