Miyakogusa Predicted Gene

Lj0g3v0345289.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0345289.1 Non Chatacterized Hit- tr|I1N2Y3|I1N2Y3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.38159
PE,42.68,0.001,seg,NULL,CUFF.23688.1
         (88 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g43160.1                                                        47   5e-06

>Glyma18g43160.1 
          Length = 531

 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 38/62 (61%), Gaps = 1/62 (1%)

Query: 21  DFPYYEEVEANK-MFMVDDNGNDDIVSIEEKTEVFKDLEFQHAEFELKQLVEAVVSNGLA 79
           DF   EEVE  K MF   DN ND IVSIEE    F++   Q AE E++ L+EAV +NG  
Sbjct: 353 DFLSNEEVEDIKDMFKKMDNDNDGIVSIEELKAGFRNFGSQLAESEVQLLIEAVDTNGKG 412

Query: 80  TI 81
           T+
Sbjct: 413 TL 414