Miyakogusa Predicted Gene

Lj0g3v0344069.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0344069.1 tr|A9TEZ0|A9TEZ0_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_91885
,53.01,1e-16,seg,NULL,NODE_26385_length_636_cov_192.795593.path2.1
         (154 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g42160.1                                                       233   8e-62
Glyma14g06730.1                                                       222   2e-58

>Glyma02g42160.1 
          Length = 683

 Score =  233 bits (593), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 120/157 (76%), Positives = 127/157 (80%), Gaps = 4/157 (2%)

Query: 1   MANRREQRDLFHG--VDPVDPLXXXXXX-XXXXXXXXXXXXRSEVGLTERLTDVLVDEGD 57
           MA+RRE RDLFH   +DPVD L                   R++VGLTERLTD+LVDE D
Sbjct: 1   MASRRE-RDLFHSDEIDPVDALNGEDFDDSSSVESATSGGSRTQVGLTERLTDILVDERD 59

Query: 58  SDLLIQQTNREDRLLLWLQALDMQVVGACRADERLKPLLKMNTACGVAEDPLLAQLTQHF 117
            DLLIQQTNREDRLL WLQALDMQV+GACRADERLKPLLKMN ACGVAEDPLLAQLTQHF
Sbjct: 60  GDLLIQQTNREDRLLQWLQALDMQVMGACRADERLKPLLKMNAACGVAEDPLLAQLTQHF 119

Query: 118 EPSEVGMLARCFCVPLVSIRVGKIHNEGTRFCPTDIR 154
           EPSEVGMLARCFCVPLVSIRVGKI+ EGTRFCPT IR
Sbjct: 120 EPSEVGMLARCFCVPLVSIRVGKINKEGTRFCPTSIR 156


>Glyma14g06730.1 
          Length = 640

 Score =  222 bits (565), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 114/158 (72%), Positives = 124/158 (78%), Gaps = 6/158 (3%)

Query: 1   MANRREQRDLFHGVDPVDPLXXXX----XXXXXXXXXXXXXXRSEVGLTERLTDVLVDEG 56
           MAN RE RDLFH +D +DP+                      R++VGLTERLTD+LVDE 
Sbjct: 1   MANWRE-RDLFH-IDEIDPVDASNGEDFDDSSSVDSATSDGSRTQVGLTERLTDILVDER 58

Query: 57  DSDLLIQQTNREDRLLLWLQALDMQVVGACRADERLKPLLKMNTACGVAEDPLLAQLTQH 116
           D DLLIQQTNREDRLL WLQALDMQV+GACRADERLKPLLKMN +CGVAEDPLLAQLTQH
Sbjct: 59  DGDLLIQQTNREDRLLWWLQALDMQVMGACRADERLKPLLKMNASCGVAEDPLLAQLTQH 118

Query: 117 FEPSEVGMLARCFCVPLVSIRVGKIHNEGTRFCPTDIR 154
           FEPSEVG+LARCFCVPLVS RVGKI+ EGTRFCPT  R
Sbjct: 119 FEPSEVGILARCFCVPLVSFRVGKINKEGTRFCPTSNR 156