Miyakogusa Predicted Gene

Lj0g3v0342229.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0342229.1 tr|G7JJ22|G7JJ22_MEDTR Helicase swr1 OS=Medicago
truncatula GN=MTR_4g118720 PE=4 SV=1,61.66,0,coiled-coil,NULL;
HSA,Helicase/SANT-associated, DNA binding; seg,NULL; no
description,Glutamine-Leuc,CUFF.23470.1
         (882 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g02540.1                                                       938   0.0  
Glyma17g02540.2                                                       936   0.0  
Glyma07g38180.1                                                       916   0.0  

>Glyma17g02540.1 
          Length = 3216

 Score =  938 bits (2425), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 539/909 (59%), Positives = 604/909 (66%), Gaps = 119/909 (13%)

Query: 1   MDSSQNVEMEAAKFLHKLIQDSKDEPAKLATKLHVILQHMKSSGKEHTMPYQVISRAMET 60
           M SS NVE+EAAKFLHKLIQDSKDEPAKLATKL+VILQHMKSSGKEH+MPYQVISRAMET
Sbjct: 1   MASSHNVELEAAKFLHKLIQDSKDEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMET 60

Query: 61  VINQHSLDIEALKSSRLPLSGSAQIGSS-QAVGVAKDSRAGLAENEMPKM--VASGRPPV 117
           VINQH LDIEALKSSRLPL+G  QIGSS Q+V V KDSR GLAENE+ KM   ASGRPPV
Sbjct: 61  VINQHGLDIEALKSSRLPLTGGPQIGSSSQSVNVTKDSRVGLAENEVSKMDPFASGRPPV 120

Query: 118 APSSGATDFYQGSVTQRSGQSFDPESPSSLDSRSAHSQSQDQHDAAKLDKQVKQKDGKKA 177
           APS GA D+YQGSV QRS QSFD  SPSSLDSRSA+SQSQD+ D A  DKQV QKDGKKA
Sbjct: 121 APSGGAPDYYQGSVAQRSSQSFDQGSPSSLDSRSANSQSQDRRDTANWDKQVSQKDGKKA 180

Query: 178 TSKRKRGDTSSPVEPHTDVPSQLDSQNTVNTRKGKMMTESSDGLPVKSGDLTKFNMVPSS 237
           T+KRKRGDTSSPVE H D PSQLD +NTV                 K+G+LT FNM P+S
Sbjct: 181 TTKRKRGDTSSPVELHVDSPSQLDPRNTV-----------------KNGELTNFNMTPNS 223

Query: 238 IQMEHFPALSGSMQTMHSANQEGAYAKVHGGLVVATTSQPMSEP-VFSSSVQYGSVLEND 296
            QME+  ALSGSM+TM  ANQEG     H  L   T    +  P V + + +Y       
Sbjct: 224 GQMENVSALSGSMRTMLRANQEG-----HHLLAKQTDLTKVGNPMVRAPNSKYAE----- 273

Query: 297 GGSSTSLTDRHKIAQIGRQGSFSET---TALRQGFPPKDTGKSAVSAVPESSSTPFKEQQ 353
               T ++  H IA   +Q   S       L+        G   V            EQQ
Sbjct: 274 ---DTEVSSAH-IASGKQQARLSCDHFGACLKYNL----EGDGLV------------EQQ 313

Query: 354 LKQLRAQCLVFLAFRNNLAPKKLHLEIALGTSFSREG---KDPIDHKXXXXXXXXXXXXX 410
           LKQLRAQCLVFLAFRN LAPKKLHLEIALGT+FSRE    KD ID K             
Sbjct: 314 LKQLRAQCLVFLAFRNGLAPKKLHLEIALGTAFSREDGSRKDLIDLKGKSQSFNEPGNSS 373

Query: 411 XVMMPFGCLNNMRQSDSNPSGPSSTGKTVEADSYSKGTESPRVMEDNGILSEERKHLLAA 470
             MMPFG  +N RQ+D N  G SS GK VEADS SKGTESPR++ED G       +L   
Sbjct: 374 GAMMPFGGPSNARQTDKNLLGSSSVGKIVEADSLSKGTESPRMLEDKG-------NLHVT 426

Query: 471 KKGEFEKQIQEKVAAQASLTTSFQQ-DSSS-----LNKQTNPEISG---WTGFASPNEAA 521
           K+GE +++IQE+VA+QAS  TS QQ DSSS     + +     ++G   W GFA  NEA+
Sbjct: 427 KRGEVDRRIQERVASQASSATSCQQQDSSSTRGALVGRSNQSSVAGPNNWAGFAGANEAS 486

Query: 522 KGSPQ----------------PSQFLNIVNNGGSRNHDPFSLKDHLKPIAGIDVHSQGAM 565
           KG PQ                PSQF N+               +  KP+ G+D    GA 
Sbjct: 487 KGPPQVSAIQHELPIERRENIPSQFQNV---------------EQWKPVPGMDSDPHGAT 531

Query: 566 MMQDTNSMIKYVSSDGFKSVPVDGTSRQEGNESQLSSNLPP-PKYTMSERWIMDQQRNRL 624
           MM+D N MIK+VS +            Q+GNE  +S++ PP PKYTMSERWIMDQQ+ R 
Sbjct: 532 MMKDGNVMIKHVSPE------------QDGNERLVSADFPPSPKYTMSERWIMDQQKKRR 579

Query: 625 LVEQNWVHKQQKTKQRMVTSFLKLKENVNSSEDISNKTKSVIEXXXXXXXXXXXXXXSDF 684
           L+EQNW+ KQQKTKQRM TSF KLKENV+SSEDIS KTKSVIE              SDF
Sbjct: 580 LLEQNWMLKQQKTKQRMATSFHKLKENVSSSEDISAKTKSVIELKKLQLLELQRRLRSDF 639

Query: 685 LNDFFKPITTEMEHLKSIKKHRHGRRVKQLEKIEHKMKDXXXXXXXXXXXXFFSEIEVHK 744
           LNDFFKPI TEMEHLKSIKKHRHGRRVKQLE+ E KMK+            FFSEIEVHK
Sbjct: 640 LNDFFKPIATEMEHLKSIKKHRHGRRVKQLERFEQKMKEERQKRIRERQKEFFSEIEVHK 699

Query: 745 ERLDDVFKMKRERWKGLNRYVKEFHKRKERIHREKIDRIQREKINLLKINDVEGYLRMVQ 804
           E+LDDVFK+KRERWKG NRYVKEFHKRKERIHREKIDRIQREKINLLKINDVEGYLRMVQ
Sbjct: 700 EKLDDVFKIKRERWKGFNRYVKEFHKRKERIHREKIDRIQREKINLLKINDVEGYLRMVQ 759

Query: 805 DAKSDRVKQLLKETEKYLQKLGSKLREAKAAAGPFEYDVDEARSGSFXXXXXXXXXXXXX 864
           DAKSDRVKQLLKETEKYLQKLGSKL+EAK AAG F  DVDE  + SF             
Sbjct: 760 DAKSDRVKQLLKETEKYLQKLGSKLQEAKTAAGRFGQDVDETGNVSF--LENSETENVDE 817

Query: 865 TDQAKASFT 873
           +DQAKA+ +
Sbjct: 818 SDQAKANIS 826


>Glyma17g02540.2 
          Length = 3031

 Score =  936 bits (2419), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 537/913 (58%), Positives = 602/913 (65%), Gaps = 127/913 (13%)

Query: 1   MDSSQNVEMEAAKFLHKLIQDSKDEPAKLATKLHVILQHMKSSGKEHTMPYQVISRAMET 60
           M SS NVE+EAAKFLHKLIQDSKDEPAKLATKL+VILQHMKSSGKEH+MPYQVISRAMET
Sbjct: 1   MASSHNVELEAAKFLHKLIQDSKDEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMET 60

Query: 61  VINQHSLDIEALKSSRLPLSGSAQIGSS-QAVGVAKDSRAGLAENEMPKM--VASGRPPV 117
           VINQH LDIEALKSSRLPL+G  QIGSS Q+V V KDSR GLAENE+ KM   ASGRPPV
Sbjct: 61  VINQHGLDIEALKSSRLPLTGGPQIGSSSQSVNVTKDSRVGLAENEVSKMDPFASGRPPV 120

Query: 118 APSSGATDFYQGSVTQRSGQSFDPESPSSLDSRSAHSQSQDQHDAAKLDKQVKQKDGKKA 177
           APS GA D+YQGSV QRS QSFD  SPSSLDSRSA+SQSQD+ D A  DKQV QKDGKKA
Sbjct: 121 APSGGAPDYYQGSVAQRSSQSFDQGSPSSLDSRSANSQSQDRRDTANWDKQVSQKDGKKA 180

Query: 178 TSKRKRGDTSSPVEPHTDVPSQLDSQNTVNTRKGKMMTESSDGLPVKSGDLTKFNMVPSS 237
           T+KRKRGDTSSPVE H D PSQLD +NTV                 K+G+LT FNM P+S
Sbjct: 181 TTKRKRGDTSSPVELHVDSPSQLDPRNTV-----------------KNGELTNFNMTPNS 223

Query: 238 IQMEHFPALSGSMQTMHSANQEGAY--------AKVHGGLVVATTSQPMSEPVFSSSVQY 289
            QME+  ALSGSM+TM  ANQEG +         KV   +V A  S+      ++   + 
Sbjct: 224 GQMENVSALSGSMRTMLRANQEGHHLLAKQTDLTKVGNPMVRAPNSK------YAEDTEV 277

Query: 290 GSVLENDGGSSTSLTDRHKIAQIGRQGSFSETTALRQGFPPKDTGKSAVSAVPESSSTPF 349
            S     G     L+  H  A             L+        G   V           
Sbjct: 278 SSAHIASGKQQARLSCDHFGA------------CLKYNL----EGDGLV----------- 310

Query: 350 KEQQLKQLRAQCLVFLAFRNNLAPKKLHLEIALGTSFSREG---KDPIDHKXXXXXXXXX 406
            EQQLKQLRAQCLVFLAFRN LAPKKLHLEIALGT+FSRE    KD ID K         
Sbjct: 311 -EQQLKQLRAQCLVFLAFRNGLAPKKLHLEIALGTAFSREDGSRKDLIDLKGKSQSFNEP 369

Query: 407 XXXXXVMMPFGCLNNMRQSDSNPSGPSSTGKTVEADSYSKGTESPRVMEDNGILSEERKH 466
                 MMPFG  +N RQ+D N  G SS GK VEADS SKGTESPR++ED G       +
Sbjct: 370 GNSSGAMMPFGGPSNARQTDKNLLGSSSVGKIVEADSLSKGTESPRMLEDKG-------N 422

Query: 467 LLAAKKGEFEKQIQEKVAAQASLTTSFQQ-DSSS-----LNKQTNPEISG---WTGFASP 517
           L   K+GE +++IQE+VA+QAS  TS QQ DSSS     + +     ++G   W GFA  
Sbjct: 423 LHVTKRGEVDRRIQERVASQASSATSCQQQDSSSTRGALVGRSNQSSVAGPNNWAGFAGA 482

Query: 518 NEAAKGSPQ----------------PSQFLNIVNNGGSRNHDPFSLKDHLKPIAGIDVHS 561
           NEA+KG PQ                PSQF N+               +  KP+ G+D   
Sbjct: 483 NEASKGPPQVSAIQHELPIERRENIPSQFQNV---------------EQWKPVPGMDSDP 527

Query: 562 QGAMMMQDTNSMIKYVSSDGFKSVPVDGTSRQEGNESQLSSNLPP-PKYTMSERWIMDQQ 620
            GA MM+D N MIK+VS +            Q+GNE  +S++ PP PKYTMSERWIMDQQ
Sbjct: 528 HGATMMKDGNVMIKHVSPE------------QDGNERLVSADFPPSPKYTMSERWIMDQQ 575

Query: 621 RNRLLVEQNWVHKQQKTKQRMVTSFLKLKENVNSSEDISNKTKSVIEXXXXXXXXXXXXX 680
           + R L+EQNW+ KQQKTKQRM TSF KLKENV+SSEDIS KTKSVIE             
Sbjct: 576 KKRRLLEQNWMLKQQKTKQRMATSFHKLKENVSSSEDISAKTKSVIELKKLQLLELQRRL 635

Query: 681 XSDFLNDFFKPITTEMEHLKSIKKHRHGRRVKQLEKIEHKMKDXXXXXXXXXXXXFFSEI 740
            SDFLNDFFKPI TEMEHLKSIKKHRHGRRVKQLE+ E KMK+            FFSEI
Sbjct: 636 RSDFLNDFFKPIATEMEHLKSIKKHRHGRRVKQLERFEQKMKEERQKRIRERQKEFFSEI 695

Query: 741 EVHKERLDDVFKMKRERWKGLNRYVKEFHKRKERIHREKIDRIQREKINLLKINDVEGYL 800
           EVHKE+LDDVFK+KRERWKG NRYVKEFHKRKERIHREKIDRIQREKINLLKINDVEGYL
Sbjct: 696 EVHKEKLDDVFKIKRERWKGFNRYVKEFHKRKERIHREKIDRIQREKINLLKINDVEGYL 755

Query: 801 RMVQDAKSDRVKQLLKETEKYLQKLGSKLREAKAAAGPFEYDVDEARSGSFXXXXXXXXX 860
           RMVQDAKSDRVKQLLKETEKYLQKLGSKL+EAK AAG F  DVDE  + SF         
Sbjct: 756 RMVQDAKSDRVKQLLKETEKYLQKLGSKLQEAKTAAGRFGQDVDETGNVSF--LENSETE 813

Query: 861 XXXXTDQAKASFT 873
               +DQAKA+ +
Sbjct: 814 NVDESDQAKANIS 826


>Glyma07g38180.1 
          Length = 3013

 Score =  916 bits (2367), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 527/891 (59%), Positives = 592/891 (66%), Gaps = 115/891 (12%)

Query: 1   MDSSQNVEMEAAKFLHKLIQDSKDEPAKLATKLHVILQHMKSSGKEHTMPYQVISRAMET 60
           M SS NVE+EAAKFLHKLIQDSKDEPAKLATKL+VILQHMKSS KEH+MPYQVISRAMET
Sbjct: 1   MASSHNVELEAAKFLHKLIQDSKDEPAKLATKLYVILQHMKSSSKEHSMPYQVISRAMET 60

Query: 61  VINQHSLDIEALKSSRLPLSGSAQIG-SSQAVGVAKDSRAGLAENEMPKM--VASGRPPV 117
           VINQH LDIEALKSSRLPL+G  QIG SSQ++ V KDSR  LAENE+ KM   ASGRPPV
Sbjct: 61  VINQHGLDIEALKSSRLPLTGGPQIGSSSQSMNVTKDSRVSLAENEVSKMDPFASGRPPV 120

Query: 118 APSSGATDFYQGSVTQRSGQSFDPESPSSLDSRSAHSQSQDQHDAAKLDKQVKQKDGKKA 177
           APS GA D+YQGSV QRSGQSFD  SPSSLDSRSA+SQSQD+ D A  DKQV QKDGKKA
Sbjct: 121 APSGGAPDYYQGSVAQRSGQSFDQGSPSSLDSRSANSQSQDRRDTANWDKQVSQKDGKKA 180

Query: 178 TSKRKRGDTSSPVEPHTDVPSQLDSQNTVNTRKGKMMTESSDGLPVKSGDLTKFNMVPSS 237
            +KRKRGDTSSPVE H D PSQLD +NT                 VKSG+LT FNM P+S
Sbjct: 181 MTKRKRGDTSSPVELHVDSPSQLDPRNT-----------------VKSGELTNFNMAPNS 223

Query: 238 IQMEHFPALSGSMQTMHSANQEGAY--------AKVHGGLVVATTSQPMSEPVFSSSVQY 289
            Q+E+  ALSGSM+TM  ANQEG +         KV G L+V   +   +E    SS   
Sbjct: 224 GQLENISALSGSMRTMLRANQEGHHLLAKQTDLTKV-GNLMVRAPNSKYAEDTEVSSAHI 282

Query: 290 GSVLENDGGSSTSLTDRHK-IAQIGRQGSFSETTALRQGFPPKDTGKSAVSAVPESSSTP 348
            S  +   G+  SL   +  ++++    +       +  +  +DTGK A+         P
Sbjct: 283 ASGKQQ--GTCYSLNFAYAFVSKLYYPQAILIKLQNQLDYLTRDTGKPAM---------P 331

Query: 349 FKEQQLKQLRAQCLVFLAFRNNLAPKKLHLEIALGTSFSREG---KDPIDHKXXXXXXXX 405
           FKEQQLKQLRAQCLVFLAFRN LAPKKLHLEIALGT+FSRE    KD IDHK        
Sbjct: 332 FKEQQLKQLRAQCLVFLAFRNGLAPKKLHLEIALGTAFSREDGSRKDLIDHKGKSQSFNE 391

Query: 406 XXXXXXVMMPFGCLNNMRQSDSNPSGPSSTGKTVEADSYSKGTESPRVMEDNGILSEERK 465
                 VMMPFG  +N+RQ+D NP G SS GK VEADS SKGTESPR +ED G       
Sbjct: 392 PGNSSGVMMPFGGPSNVRQTDKNPLGSSSAGKIVEADSLSKGTESPRTLEDKG------- 444

Query: 466 HLLAAKKGEFEKQIQEKVAAQASLTTSF-QQDSSS--------------------LNKQT 504
           +L   K+GE E++IQE+VAAQAS  TS  QQDSSS                    + +  
Sbjct: 445 NLHVTKRGEVERRIQERVAAQASSATSCQQQDSSSTRGAVVGNNHLDDVDTGNMQVGRSN 504

Query: 505 NPEISG---WTGFASPNEAAKGSPQPSQFLNIVNNGGSRNHDPFSLKDHLKPIAGIDVHS 561
              + G   W GFA  NEA+KG PQ    LN                             
Sbjct: 505 QSSVVGPNNWAGFAGANEASKGPPQVKAILN----------------------------- 535

Query: 562 QGAMMMQDTNSMIKYVSSDGFKSVPVDGTSRQEGNESQLSSNLPP-PKYTMSERWIMDQQ 620
              M++Q     +K + S  F+   + G          ++S+LPP PK TM+ERWIMDQQ
Sbjct: 536 -ETMLLQSVT--LKLIFSALFQVSIIYGF-------LNINSDLPPSPKCTMTERWIMDQQ 585

Query: 621 RNRLLVEQNWVHKQQKTKQRMVTSFLKLKENVNSSEDISNKTKSVIEXXXXXXXXXXXXX 680
           + RLLVEQNWV KQQKTKQRM TSF KLKENV+SSEDIS KTKSVIE             
Sbjct: 586 KKRLLVEQNWVLKQQKTKQRMATSFYKLKENVSSSEDISAKTKSVIELKKLQLLELQRRL 645

Query: 681 XSDFLNDFFKPITTEMEHLKSIKKHRHGRRVKQLEKIEHKMKDXXXXXXXXXXXXFFSEI 740
            SDFLNDFFKPI TEMEHLKSIKKHRHGRRVKQLE+ E KMK+            FFSEI
Sbjct: 646 RSDFLNDFFKPIATEMEHLKSIKKHRHGRRVKQLERFELKMKEERQKRIRERQKEFFSEI 705

Query: 741 EVHKERLDDVFKMKRERWKGLNRYVKEFHKRKERIHREKIDRIQREKINLLKINDVEGYL 800
           EVHKE+LDDVFK+KRERWKG NRYVKEFHKRKERIHREKIDRIQREKINLLKINDVEGYL
Sbjct: 706 EVHKEKLDDVFKIKRERWKGFNRYVKEFHKRKERIHREKIDRIQREKINLLKINDVEGYL 765

Query: 801 RMVQDAKSDRVKQLLKETEKYLQKLGSKLREAKAAAGPFEYDVDEARSGSF 851
           RMVQDAKSDRVKQLLKETEKYLQKLGSKL+EAK AAG F  DVDE  + SF
Sbjct: 766 RMVQDAKSDRVKQLLKETEKYLQKLGSKLQEAKTAAGRFGQDVDETGNVSF 816