Miyakogusa Predicted Gene

Lj0g3v0342159.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0342159.1 Non Chatacterized Hit- tr|I1LX42|I1LX42_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.53128
PE,59.65,6e-19,seg,NULL,CUFF.23447.1
         (131 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g06920.1                                                       125   1e-29
Glyma13g07790.1                                                       119   9e-28
Glyma13g07790.2                                                        96   1e-20

>Glyma19g06920.1 
          Length = 134

 Score =  125 bits (314), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 74/126 (58%), Positives = 83/126 (65%), Gaps = 9/126 (7%)

Query: 12  AAMASSLCLQPNFNPKGVTKDQLSKFRELHRKRLQLXXXXXXXXXXXXXDVTNKKFQGYD 71
           AAMASS CL+PNFNPKG+T+DQLSKFRELH++RLQL             D  NKK  GY 
Sbjct: 12  AAMASSSCLRPNFNPKGITQDQLSKFRELHKRRLQL--KSKSKFKTKSKDGANKKSHGYG 69

Query: 72  LSSQSSEAQGLKIDDK------DGECSDSQNTDSKGGGVLVPSSSKKQKLHWGLDTKERW 125
           LSSQ+S  QG  +D +      D E  DS+  DSK   V V S  KKQKLHWGLDTK RW
Sbjct: 70  LSSQNSVTQGSNVDHRESRLWNDCEGFDSRIEDSK-DDVPVMSEPKKQKLHWGLDTKNRW 128

Query: 126 ERKSNM 131
           ERKSNM
Sbjct: 129 ERKSNM 134


>Glyma13g07790.1 
          Length = 142

 Score =  119 bits (298), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 71/126 (56%), Positives = 82/126 (65%), Gaps = 9/126 (7%)

Query: 12  AAMASSLCLQPNFNPKGVTKDQLSKFRELHRKRLQLXXXXXXXXXXXXXDVTNKKFQGYD 71
           AA+ASS CL+PNFNPKG+T+DQLSKFRELH++RLQL             D  NKK  G  
Sbjct: 20  AAIASSSCLRPNFNPKGITQDQLSKFRELHKRRLQL--KSKSKFKMKSKDRANKKSHGDV 77

Query: 72  LSSQSSEAQGLKIDDK------DGECSDSQNTDSKGGGVLVPSSSKKQKLHWGLDTKERW 125
           LSSQ+   QG  +D K      D E  DS+  DSK   + V S+ KKQKLHWGLDTK RW
Sbjct: 78  LSSQNGGTQGSNVDHKESNLWNDCEGFDSRYEDSK-DDIPVMSAPKKQKLHWGLDTKNRW 136

Query: 126 ERKSNM 131
           ERKSNM
Sbjct: 137 ERKSNM 142


>Glyma13g07790.2 
          Length = 141

 Score = 95.9 bits (237), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/114 (51%), Positives = 71/114 (62%), Gaps = 9/114 (7%)

Query: 12  AAMASSLCLQPNFNPKGVTKDQLSKFRELHRKRLQLXXXXXXXXXXXXXDVTNKKFQGYD 71
           AA+ASS CL+PNFNPKG+T+DQLSKFRELH++RLQL             D  NKK  G  
Sbjct: 20  AAIASSSCLRPNFNPKGITQDQLSKFRELHKRRLQL--KSKSKFKMKSKDRANKKSHGDV 77

Query: 72  LSSQSSEAQGLKIDDK------DGECSDSQNTDSKGGGVLVPSSSKKQKLHWGL 119
           LSSQ+   QG  +D K      D E  DS+  DSK   + V S+ KKQKLHWG+
Sbjct: 78  LSSQNGGTQGSNVDHKESNLWNDCEGFDSRYEDSK-DDIPVMSAPKKQKLHWGM 130