Miyakogusa Predicted Gene

Lj0g3v0342059.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0342059.1 tr|G7J5Q3|G7J5Q3_MEDTR Thylakoidal processing
peptidase OS=Medicago truncatula GN=MTR_3g100960 PE=3
,85.11,0.00000000000006,
,gene.Ljchr0_pseudomol_20120828.path1.gene35454.1
         (47 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g03840.4                                                        73   9e-14
Glyma04g03840.1                                                        73   9e-14
Glyma04g03840.2                                                        72   1e-13
Glyma04g03840.3                                                        72   1e-13
Glyma06g03940.2                                                        72   2e-13
Glyma06g03940.1                                                        72   2e-13

>Glyma04g03840.4 
          Length = 362

 Score = 72.8 bits (177), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 35/46 (76%), Positives = 37/46 (80%)

Query: 1  MANRATFSFSRYVAQNLVSSAGVRVANSRCVQECWILSRFFGTNQK 46
          MA R TFSFS YVAQ+L SSAGVRVANSRCVQECWI +R  G  QK
Sbjct: 1  MAIRVTFSFSGYVAQSLASSAGVRVANSRCVQECWIRTRLSGATQK 46


>Glyma04g03840.1 
          Length = 362

 Score = 72.8 bits (177), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 35/46 (76%), Positives = 37/46 (80%)

Query: 1  MANRATFSFSRYVAQNLVSSAGVRVANSRCVQECWILSRFFGTNQK 46
          MA R TFSFS YVAQ+L SSAGVRVANSRCVQECWI +R  G  QK
Sbjct: 1  MAIRVTFSFSGYVAQSLASSAGVRVANSRCVQECWIRTRLSGATQK 46


>Glyma04g03840.2 
          Length = 276

 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/46 (76%), Positives = 37/46 (80%)

Query: 1  MANRATFSFSRYVAQNLVSSAGVRVANSRCVQECWILSRFFGTNQK 46
          MA R TFSFS YVAQ+L SSAGVRVANSRCVQECWI +R  G  QK
Sbjct: 1  MAIRVTFSFSGYVAQSLASSAGVRVANSRCVQECWIRTRLSGATQK 46


>Glyma04g03840.3 
          Length = 321

 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/46 (76%), Positives = 37/46 (80%)

Query: 1  MANRATFSFSRYVAQNLVSSAGVRVANSRCVQECWILSRFFGTNQK 46
          MA R TFSFS YVAQ+L SSAGVRVANSRCVQECWI +R  G  QK
Sbjct: 1  MAIRVTFSFSGYVAQSLASSAGVRVANSRCVQECWIRTRLSGATQK 46


>Glyma06g03940.2 
          Length = 317

 Score = 71.6 bits (174), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/42 (80%), Positives = 36/42 (85%)

Query: 1  MANRATFSFSRYVAQNLVSSAGVRVANSRCVQECWILSRFFG 42
          MA R TFSFS YVAQ+L SSAGVRVANSRCVQECWI +R FG
Sbjct: 1  MAIRVTFSFSGYVAQSLASSAGVRVANSRCVQECWIRTRLFG 42


>Glyma06g03940.1 
          Length = 317

 Score = 71.6 bits (174), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/42 (80%), Positives = 36/42 (85%)

Query: 1  MANRATFSFSRYVAQNLVSSAGVRVANSRCVQECWILSRFFG 42
          MA R TFSFS YVAQ+L SSAGVRVANSRCVQECWI +R FG
Sbjct: 1  MAIRVTFSFSGYVAQSLASSAGVRVANSRCVQECWIRTRLFG 42