Miyakogusa Predicted Gene

Lj0g3v0341669.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0341669.2 tr|A9U2K0|A9U2K0_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_173326,42.64,1e-18,no description,NULL; seg,NULL;
S-adenosyl-L-methionine-dependent methyltransferases,NULL,CUFF.23410.2
         (352 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g17160.1                                                       362   e-100
Glyma17g09330.1                                                       144   2e-34

>Glyma08g17160.1 
          Length = 334

 Score =  362 bits (929), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 189/278 (67%), Positives = 211/278 (75%), Gaps = 28/278 (10%)

Query: 87  VLTSLRSDYNDIMIVDTPKSRMLLLDSSHNVHSILY-----KDKK--------------- 126
           VLT+L++DYNDI+IVDTPKSRMLLLDSS    SI++     ++K                
Sbjct: 56  VLTALKTDYNDILIVDTPKSRMLLLDSSCTPFSIVFTAFFTRNKNGLVLTGCVFYSDFVF 115

Query: 127 -------WTDSYWDEFASLPAIVPKGPIAIXXXXXXTAAHLMLDLWPSLHLEGWEIDDIL 179
                  WT    DEFASLP IVPKGPIAI      TAAHLMLDLWPSL L+GWEID IL
Sbjct: 116 FFFFITVWTCVLCDEFASLPVIVPKGPIAILGLGGGTAAHLMLDLWPSLQLDGWEIDQIL 175

Query: 180 IDKARDYFGLSDLEKTTEDGGILNVHIGDVFIPSEDLHRRYAGIVVDLFSDGKVLPQLEE 239
           IDKARDYFGLSDLEKTT++GG+LNVHIGDVFI SED H+RYAGI+VDLFSDGKVLPQL+E
Sbjct: 176 IDKARDYFGLSDLEKTTDNGGVLNVHIGDVFITSEDFHQRYAGIIVDLFSDGKVLPQLQE 235

Query: 240 VSAWLELNERLMANGRFMVNCXXXXXXXXXXXXFTDPQISSSDETWLLNPAMKALSKVFP 299
           VS WLEL+ERLMANGRFMVNC             TD Q +SSDE+WLLNPA++ALSK FP
Sbjct: 236 VSTWLELHERLMANGRFMVNCGGVGGGPSAVDGSTD-QETSSDESWLLNPALQALSKAFP 294

Query: 300 GQLSWKRMSKETGANFMALTGPLPDLNSWSASVPSPLS 337
           GQ+SWKRM KE G NFMALTGPLPDL+SWSASVPSPLS
Sbjct: 295 GQVSWKRMPKENGENFMALTGPLPDLDSWSASVPSPLS 332


>Glyma17g09330.1 
          Length = 317

 Score =  144 bits (363), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/267 (32%), Positives = 137/267 (51%), Gaps = 21/267 (7%)

Query: 87  VLTSLRSDYNDIMIVDTPK--------SRMLLLDSSHNVHSILYKDKKWTDSYWDEFASL 138
           +L   +S +N I +++  +        SR+LLLD+  N+HSI +  K  T++Y+D FA+L
Sbjct: 61  ILAKFKSRHNYIRVLEVSRKAEHPFRGSRLLLLDTPGNIHSISFLFKSLTNTYFDVFATL 120

Query: 139 PAIVPKGPIAIXXXXXXTAAHLMLDLWPSLHLEGWEIDDILIDKARDYFGLSDLEKTTED 198
           P IVP GP+A+      TAA L+L   PS  L  WE+D  +I  AR+YF L+ LE+  +D
Sbjct: 121 PPIVPPGPLALLGFGAGTAARLLLLHHPSALLHCWELDPAVIQVAREYFNLARLERDNQD 180

Query: 199 GGILNVHIGDVFIPSEDLHRRYAGIVVDLFSDGKVLPQLEEVSAWLELNERLMANGRFMV 258
              L +++GD    +  +   ++GIVVDLFS G ++P+L++ + W  L  RL   GR MV
Sbjct: 181 R--LFIYVGDAL--NATVPNGFSGIVVDLFSKGSLIPELQDPATWRMLRGRLRKGGRIMV 236

Query: 259 NCXXXXXXXXXXXXFTDPQISSSDETWLLNPAMKALSKVFPGQLSWKRMSKETGANFMAL 318
           N               + +    D   ++   + A+ +VF  ++    +      + +AL
Sbjct: 237 NVGGSC---------VEAENRLRDGKVVMEETLGAMKEVFGKKVFVLSLGNRKDDSSLAL 287

Query: 319 TGPLPDLNSWSASVPSPLSTSIKDWRP 345
           TG LP L  W   +P P       W P
Sbjct: 288 TGDLPHLEEWKNRLPGPFKCYADMWTP 314