Miyakogusa Predicted Gene

Lj0g3v0341589.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0341589.1 Non Chatacterized Hit- tr|I3S696|I3S696_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.79,0,rplM_bact: ribosomal protein L13,Ribosomal protein L13,
bacterial-type; 50S RIBOSOMAL PROTEIN L13,NU,CUFF.23405.1
         (248 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g32540.1                                                       406   e-114
Glyma19g22420.2                                                        94   1e-19
Glyma19g22420.1                                                        94   1e-19
Glyma19g36450.1                                                        94   1e-19

>Glyma15g32540.1 
          Length = 243

 Score =  406 bits (1044), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 206/253 (81%), Positives = 220/253 (86%), Gaps = 15/253 (5%)

Query: 1   MASLCGAASVTFPSPSFPSHK----ISTTKSSFVGFQLPLPKLS-SSSIRTHFTATLRVH 55
           MA LCG+ SVT     F SHK     ++ KSSFVGFQLPLPKL+ SSS+RT   AT RV 
Sbjct: 1   MALLCGSTSVT----PFLSHKNVGFTTSAKSSFVGFQLPLPKLTLSSSVRTLLPATSRVR 56

Query: 56  CQQETSLVTEEQSPVVAVEQDPRFMCVEPEPRFKGPDIWNKTYYPKAADHVNTEKTWYVV 115
           CQQE++ VT    PV   E+DPRF CVEPEPRFKGPDIWNK++YPKAADHVNTEKTWYVV
Sbjct: 57  CQQESTTVT----PVA--EEDPRFACVEPEPRFKGPDIWNKSWYPKAADHVNTEKTWYVV 110

Query: 116 DATDKVLGRLASTIAIHIRGKNLMTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHS 175
           DATDKVLGRLASTIAIHIRGKNL TYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHS
Sbjct: 111 DATDKVLGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHS 170

Query: 176 GRPGGMKVETFSQLQNRIPERIIEHAVRGMLPKGRLGRDLFTHLKVYKGPDHPHAAQKPV 235
           GRPGGM VETF+QLQNRIPERIIEHAVRGMLPKGRLGR LFTHLKVYKGPDHPHAAQKPV
Sbjct: 171 GRPGGMTVETFAQLQNRIPERIIEHAVRGMLPKGRLGRRLFTHLKVYKGPDHPHAAQKPV 230

Query: 236 DLPIRDKRIELKR 248
           +LPIRDKRI L++
Sbjct: 231 ELPIRDKRIHLQK 243


>Glyma19g22420.2 
          Length = 201

 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/128 (40%), Positives = 74/128 (57%), Gaps = 5/128 (3%)

Query: 112 WYVVDATDKVLGRLASTIAIHIRGKNLMTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLY 171
           W V DA  +VLGRLAS IA  ++GK+  TYTP+ D G   IV+NA+ + V+G+K T K+Y
Sbjct: 28  WRVFDAKGQVLGRLASQIATVVQGKDKPTYTPNRDDGDMCIVLNAKDICVTGRKLTDKVY 87

Query: 172 RRHSGRPGGMKVETFSQLQNRIPERIIEHAVRGMLPKGRLGRDLFTHLKVYKGPDHPHAA 231
             H+G  G +K  T      + P  +I  AV  MLP+ +L  D    L+++ G +HP   
Sbjct: 88  YWHTGYIGHLKQRTLKDQMAKDPTEVIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF-- 145

Query: 232 QKPVDLPI 239
              VD P+
Sbjct: 146 ---VDRPL 150


>Glyma19g22420.1 
          Length = 201

 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/128 (40%), Positives = 74/128 (57%), Gaps = 5/128 (3%)

Query: 112 WYVVDATDKVLGRLASTIAIHIRGKNLMTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLY 171
           W V DA  +VLGRLAS IA  ++GK+  TYTP+ D G   IV+NA+ + V+G+K T K+Y
Sbjct: 28  WRVFDAKGQVLGRLASQIATVVQGKDKPTYTPNRDDGDMCIVLNAKDICVTGRKLTDKVY 87

Query: 172 RRHSGRPGGMKVETFSQLQNRIPERIIEHAVRGMLPKGRLGRDLFTHLKVYKGPDHPHAA 231
             H+G  G +K  T      + P  +I  AV  MLP+ +L  D    L+++ G +HP   
Sbjct: 88  YWHTGYIGHLKQRTLKDQMAKDPTEVIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF-- 145

Query: 232 QKPVDLPI 239
              VD P+
Sbjct: 146 ---VDRPL 150


>Glyma19g36450.1 
          Length = 200

 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/128 (40%), Positives = 74/128 (57%), Gaps = 5/128 (3%)

Query: 112 WYVVDATDKVLGRLASTIAIHIRGKNLMTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLY 171
           W V DA  +VLGRLAS IA  ++GK+  TYTP+ D G   IV+NA+ + V+G+K T K+Y
Sbjct: 28  WRVFDAKGQVLGRLASQIATVVQGKDKPTYTPNRDDGDMCIVLNAKDICVTGRKLTDKVY 87

Query: 172 RRHSGRPGGMKVETFSQLQNRIPERIIEHAVRGMLPKGRLGRDLFTHLKVYKGPDHPHAA 231
             H+G  G +K  T      + P  +I  AV  MLP+ +L  D    L+++ G +HP   
Sbjct: 88  YWHTGYIGHLKQRTLKDQMAKDPTEVIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF-- 145

Query: 232 QKPVDLPI 239
              VD P+
Sbjct: 146 ---VDRPL 150