Miyakogusa Predicted Gene

Lj0g3v0341369.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0341369.1 CUFF.23379.1
         (132 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g13330.1                                                       229   4e-61
Glyma03g34880.1                                                       227   3e-60
Glyma03g34880.2                                                       215   9e-57

>Glyma05g13330.1 
          Length = 441

 Score =  229 bits (585), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 111/132 (84%), Positives = 120/132 (90%)

Query: 1   MEYCGTTSYFIKLLLEKKYALPYRVVDAVVAHFMKFLNETRIMPVIWHQSLLTFAQRYKN 60
           MEYCGTTSYFIKLLLEKKYALPYRVVDAVVAHF +FLNETRIMPVIWHQSLL F QRYKN
Sbjct: 310 MEYCGTTSYFIKLLLEKKYALPYRVVDAVVAHFTRFLNETRIMPVIWHQSLLAFVQRYKN 369

Query: 61  ELQKEQKDNLKFLLEKQKHKLVTPEISKELNHSRNRGEKEDDLMSISVPVSMLIKPIEEK 120
           ELQKE KD L+ LLEKQKHKLVTPEIS+EL+HSRNRGEKE+DLMSIS PV ++ K IEE 
Sbjct: 370 ELQKEDKDRLRNLLEKQKHKLVTPEISRELDHSRNRGEKEEDLMSISSPVYVINKTIEED 429

Query: 121 RDEIPEVPMEED 132
           R +IP+VPMEED
Sbjct: 430 RFDIPDVPMEED 441


>Glyma03g34880.1 
          Length = 442

 Score =  227 bits (578), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 110/132 (83%), Positives = 119/132 (90%)

Query: 1   MEYCGTTSYFIKLLLEKKYALPYRVVDAVVAHFMKFLNETRIMPVIWHQSLLTFAQRYKN 60
           MEYCGTTSYFIKLLLEKKYALPYRVVDAVVAHFM+F NETRIMPVIWHQSLL F QRYKN
Sbjct: 311 MEYCGTTSYFIKLLLEKKYALPYRVVDAVVAHFMRFFNETRIMPVIWHQSLLAFVQRYKN 370

Query: 61  ELQKEQKDNLKFLLEKQKHKLVTPEISKELNHSRNRGEKEDDLMSISVPVSMLIKPIEEK 120
           ELQKE KD L+ LLEKQKHKLVTPEIS+EL+HS NRGEKE+DLMSIS PV ++ K IEE 
Sbjct: 371 ELQKEDKDRLRNLLEKQKHKLVTPEISRELDHSCNRGEKEEDLMSISSPVYVINKTIEED 430

Query: 121 RDEIPEVPMEED 132
           R +IP+VPMEED
Sbjct: 431 RFDIPDVPMEED 442


>Glyma03g34880.2 
          Length = 438

 Score =  215 bits (548), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 106/132 (80%), Positives = 116/132 (87%), Gaps = 4/132 (3%)

Query: 1   MEYCGTTSYFIKLLLEKKYALPYRVVDAVVAHFMKFLNETRIMPVIWHQSLLTFAQRYKN 60
           MEYCGTTSYFIKLLLEKKYALPYRVVDAVVAHFM+F NETRIMPVIWHQSLL F QRYKN
Sbjct: 311 MEYCGTTSYFIKLLLEKKYALPYRVVDAVVAHFMRFFNETRIMPVIWHQSLLAFVQRYKN 370

Query: 61  ELQKEQKDNLKFLLEKQKHKLVTPEISKELNHSRNRGEKEDDLMSISVPVSMLIKPIEEK 120
           ELQKE KD L+ LLEKQKHKLVTPEIS+EL+HS NRGEKE+DL    +PV ++ K IEE 
Sbjct: 371 ELQKEDKDRLRNLLEKQKHKLVTPEISRELDHSCNRGEKEEDL----IPVYVINKTIEED 426

Query: 121 RDEIPEVPMEED 132
           R +IP+VPMEED
Sbjct: 427 RFDIPDVPMEED 438