Miyakogusa Predicted Gene

Lj0g3v0341299.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0341299.1 Non Chatacterized Hit- tr|G5DX57|G5DX57_SILLA
Putative uncharacterized protein (Fragment) OS=Silene
,37.67,3e-18,seg,NULL,CUFF.23367.1
         (208 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g09170.1                                                       208   3e-54
Glyma01g36270.1                                                       208   4e-54
Glyma09g33040.1                                                        98   5e-21
Glyma16g21400.1                                                        95   5e-20
Glyma01g22930.1                                                        50   1e-06

>Glyma11g09170.1 
          Length = 373

 Score =  208 bits (530), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 120/210 (57%), Positives = 136/210 (64%), Gaps = 10/210 (4%)

Query: 3   DEELARKLHRAMNSSPRISKNSPRSGSKGCRSKKPRXXXXXXXXXXXXX-MEVGQDCLSL 61
           DEELARKLHRAMNSSPRISKNSP S SKG + KKP+              M +GQDCLSL
Sbjct: 169 DEELARKLHRAMNSSPRISKNSPNSDSKGSKHKKPKNSSSFEMTEVSDARMALGQDCLSL 228

Query: 62  NNRHVIAGKIYSEGSNQEVCXXXXXXXXXXXXXXXXXEIDNREAELSQSKQKNCEDSSXX 121
           NN H +  K+ SEGS QEVC                   DN EAE SQSK+KN ED S  
Sbjct: 229 NNGHAVMSKVDSEGSIQEVCSNKEDKKSQMEI------TDNGEAESSQSKEKNTEDLSSV 282

Query: 122 XXXXXXXXXXXXXLSICSSKD-AQPREGIKARISSLTEMNTG-NHH-VDSIPVFPVEPST 178
                        LSIC+SKD AQP+EG++AR + LTEMNTG NHH V +IP+FP+EPST
Sbjct: 283 GRKRGRVKLKKLPLSICTSKDRAQPKEGVRARSAPLTEMNTGGNHHPVGNIPLFPMEPST 342

Query: 179 NRVMPTEATSIRKCQEFKAPACIKQNKVVQ 208
            RV+P EAT+  KCQEFKAPACIKQNK VQ
Sbjct: 343 ERVIPIEATTTCKCQEFKAPACIKQNKAVQ 372


>Glyma01g36270.1 
          Length = 375

 Score =  208 bits (529), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 118/209 (56%), Positives = 134/209 (64%), Gaps = 9/209 (4%)

Query: 3   DEELARKLHRAMNSSPRISKNSPRSGSKGCRSKKPRXXXXXXXXXXXXX-MEVGQDCLSL 61
           DEELARKLHRAMNSSPRISKNSP S SKG + KKP+              M  GQDCLSL
Sbjct: 172 DEELARKLHRAMNSSPRISKNSPNSDSKGSKHKKPKNSWSFEMTEVSDARMAFGQDCLSL 231

Query: 62  NNRHVIAGKIYSEGSNQEVCXXXXXXXXXXXXXXXXXEIDNREAELSQSKQKNCEDSSXX 121
           NN H + GK+ SEGS QEVC                   DN EAE SQSK+KN ED S  
Sbjct: 232 NNGHAVVGKVDSEGSIQEVCSNKEDKKSQMEI------TDNGEAESSQSKEKNTEDLSSV 285

Query: 122 XXXXXXXXXXXXXLSICSSKD-AQPREGIKARISSLTEMNTG-NHHVDSIPVFPVEPSTN 179
                        LSIC+SKD A P+EG++AR + LTEMNTG NH V +IP+FP+EPST+
Sbjct: 286 GRKRGRVKLKKLPLSICTSKDRALPKEGVRARSAPLTEMNTGGNHAVGNIPLFPMEPSTD 345

Query: 180 RVMPTEATSIRKCQEFKAPACIKQNKVVQ 208
           RV+P EAT+  KCQE KAPACIKQNK VQ
Sbjct: 346 RVIPIEATTTCKCQELKAPACIKQNKAVQ 374


>Glyma09g33040.1 
          Length = 297

 Score = 98.2 bits (243), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 79/208 (37%), Positives = 88/208 (42%), Gaps = 82/208 (39%)

Query: 3   DEELARKLHRAMNSSPRISKNSPRSGSKGCRSKKPRXXXXXXXXX-XXXXMEVGQDCLSL 61
           DEELARKLHRAMNSSPRISK+SP S  K  + KKPR              + + QDCLSL
Sbjct: 169 DEELARKLHRAMNSSPRISKSSPNSDPKRSKHKKPRSSSSFEMTEGSESGVALRQDCLSL 228

Query: 62  NNRHVIAGKIYSEGSNQEVCXXXXXXXXXXXXXXXXXEIDNREAELSQSKQKNCEDSSXX 121
           NN H IAGKI SEGS QEVC                            SK++        
Sbjct: 229 NNEHAIAGKIDSEGSIQEVCS---------------------------SKKRG------- 254

Query: 122 XXXXXXXXXXXXXLSICSSKD-AQPREGIKARISSLTEMNTGNHHVDSIPVFPVEPSTNR 180
                        LSIC+SKD AQP+E I+AR                            
Sbjct: 255 -----RVKLKKLPLSICTSKDRAQPKEEIRAR---------------------------- 281

Query: 181 VMPTEATSIRKCQEFKAPACIKQNKVVQ 208
                         FKAPACIKQNK VQ
Sbjct: 282 -------------SFKAPACIKQNKAVQ 296


>Glyma16g21400.1 
          Length = 294

 Score = 95.1 bits (235), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 73/188 (38%), Positives = 86/188 (45%), Gaps = 62/188 (32%)

Query: 3   DEELARKLHRAMNSSPRISKNSPRSGSKGCRSKKPRXXXX-XXXXXXXXXMEVGQDCLSL 61
           DEELA KLHRAMNSSPRISK+SP S SKG + KKPR              + + QDCLSL
Sbjct: 168 DEELAHKLHRAMNSSPRISKSSPNSDSKGSKHKKPRSSSSFEMTEGSESGVALRQDCLSL 227

Query: 62  NNRHVIAGKIYSEGSNQEVCXXXXXXXXXXXXXXXXXEIDNREAELSQSKQKNCEDSSXX 121
           N+ H IAG I SEGS QEVC                       ++LSQSK K  EDSS  
Sbjct: 228 NDEHAIAGMIDSEGSIQEVC-----------------------SKLSQSKGKKFEDSSS- 263

Query: 122 XXXXXXXXXXXXXLSICSSKDAQPREGIKARISSLTEMNTGNHHVDSIPVFPVEPSTNRV 181
                              K  + +E I+ R                      E S++RV
Sbjct: 264 ----------------IGKKRGRLKEEIRVR---------------------TESSSDRV 286

Query: 182 MPTEATSI 189
           MP EATS+
Sbjct: 287 MPIEATSM 294


>Glyma01g22930.1 
          Length = 140

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 36/75 (48%), Gaps = 34/75 (45%)

Query: 135 LSICSSKD-AQPREGIKARISSLTEMNTGNHHVDSIPVFPVEPSTNRVMPTEATSIRKCQ 193
           LSIC+SKD AQP E                                 V+P EAT+  KCQ
Sbjct: 98  LSICTSKDRAQPME---------------------------------VIPIEATTTCKCQ 124

Query: 194 EFKAPACIKQNKVVQ 208
           EFKAPACIKQNK VQ
Sbjct: 125 EFKAPACIKQNKAVQ 139