Miyakogusa Predicted Gene

Lj0g3v0339979.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0339979.1 NODE_44999_length_815_cov_33.947239.path1.1
         (142 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g06150.1                                                       254   3e-68
Glyma05g33570.1                                                        75   2e-14
Glyma05g33580.1                                                        70   9e-13

>Glyma08g06150.1 
          Length = 351

 Score =  254 bits (648), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 124/142 (87%), Positives = 136/142 (95%)

Query: 1   MQSKVGVEDLRSIFLKGGGIFTLAKIYQLLARKLSGKVLVEAANYQVKKEIMKKGGQLAM 60
           +QSKVG +D+ SI LKGGG+FTL+KIYQLLARKLSGKVLVEAANYQVKKE++KKGGQLAM
Sbjct: 210 VQSKVGAQDIPSILLKGGGVFTLSKIYQLLARKLSGKVLVEAANYQVKKELVKKGGQLAM 269

Query: 61  INLESRTALLAAKQGFLGAASRYLGFRSMITLLGPVLWGTFLADLVIQMLGTDYSRILRT 120
           INLESR A+LAAKQGFLGAASRYLGFRS++TLLGPVLWGTFLADLVIQMLGTDY+RILRT
Sbjct: 270 INLESRAAMLAAKQGFLGAASRYLGFRSVVTLLGPVLWGTFLADLVIQMLGTDYARILRT 329

Query: 121 IYALAQIRAIRTYRLPSDVTDE 142
           IYALAQIR IRTYRL S+VTDE
Sbjct: 330 IYALAQIRVIRTYRLSSEVTDE 351


>Glyma05g33570.1 
          Length = 188

 Score = 75.1 bits (183), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 36/46 (78%), Positives = 41/46 (89%)

Query: 1   MQSKVGVEDLRSIFLKGGGIFTLAKIYQLLARKLSGKVLVEAANYQ 46
           +QSKVG +D+ SI LKGGG+FTL+KIYQLLARKLSGK LVEAAN Q
Sbjct: 140 VQSKVGAQDIPSIVLKGGGVFTLSKIYQLLARKLSGKALVEAANCQ 185


>Glyma05g33580.1 
          Length = 76

 Score = 69.7 bits (169), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 37/52 (71%), Positives = 39/52 (75%), Gaps = 11/52 (21%)

Query: 100 TFLADLVIQMLGTDYSRILRTIYALAQ-----------IRAIRTYRLPSDVT 140
           TFLADLVIQMLGTDY+RILRTIYALAQ           IR IRT RLPSD+T
Sbjct: 1   TFLADLVIQMLGTDYARILRTIYALAQARCSIVPSYLLIRVIRTCRLPSDIT 52