Miyakogusa Predicted Gene

Lj0g3v0339599.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0339599.1 Non Chatacterized Hit- tr|I1KRM0|I1KRM0_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,60,0.00000000000004,seg,NULL,CUFF.23228.1
         (123 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g26520.1                                                        76   8e-15
Glyma08g09510.1                                                        69   1e-12
Glyma09g05330.1                                                        47   5e-06

>Glyma05g26520.1 
          Length = 1268

 Score = 76.3 bits (186), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 42/85 (49%), Positives = 50/85 (58%), Gaps = 4/85 (4%)

Query: 23  NLHLCGSPLDRCDDTPNNENSGRNESSVMXXXXXXXXXXXXXXXXXXRIFCRNKQEFFRK 82
           NLHLCGSPL+RC     + ++G NESSV                   RIF +NKQEF RK
Sbjct: 860 NLHLCGSPLERCRRDDASGSAGLNESSVAIISSLSTLAVIALLIVAVRIFSKNKQEFCRK 919

Query: 83  NSEVTYVY----SSSQRRPLFKLHA 103
            SEV YVY    S +QRRPLF+L+A
Sbjct: 920 GSEVNYVYSSSSSQAQRRPLFQLNA 944


>Glyma08g09510.1 
          Length = 1272

 Score = 69.3 bits (168), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/85 (45%), Positives = 47/85 (55%), Gaps = 4/85 (4%)

Query: 23  NLHLCGSPLDRCDDTPNNENSGRNESSVMXXXXXXXXXXXXXXXXXXRIFCRNKQEFFRK 82
           NL LCGSPL+RC     + ++G NES V                   RIF +NKQEF  K
Sbjct: 864 NLQLCGSPLERCRRDDASRSAGLNESLVAIISSISTLAAIALLILAVRIFSKNKQEFCWK 923

Query: 83  NSEVTYVY----SSSQRRPLFKLHA 103
            SEV YVY    S +QRRPLF+L+A
Sbjct: 924 GSEVNYVYSSSSSQAQRRPLFQLNA 948


>Glyma09g05330.1 
          Length = 1257

 Score = 46.6 bits (109), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 11/101 (10%)

Query: 4   EFCHHPHQPCRSQLVRMKRNLHLCGSPLDRCDDTPNNENSGRNESSVMXXXXXXXXXXXX 63
           +F   PH          + NL LCG+ L  CD +  N+    + +SV+            
Sbjct: 843 QFSRWPHDA-------FEGNLLLCGASLGSCD-SGGNKRVVLSNTSVVIVSALSTLAAIA 894

Query: 64  XXXXXXRIFCRNKQEFFRKNSEVTYVYSSS---QRRPLFKL 101
                  IF RNKQEFFR+ SE++ V+SSS   Q+R L  L
Sbjct: 895 LLVLAVIIFLRNKQEFFRRGSELSLVFSSSSRAQKRTLIPL 935