Miyakogusa Predicted Gene

Lj0g3v0338819.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0338819.1 Non Chatacterized Hit- tr|F6XUI4|F6XUI4_CIOIN
Uncharacterized protein OS=Ciona intestinalis PE=4
SV=,36.89,0.000000001,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,Rab3
GTPase-activating protein catalytic subunit; seg,NUL,CUFF.23173.1
         (475 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g02550.1                                                       518   e-147
Glyma02g46190.1                                                       515   e-146
Glyma08g43140.1                                                       432   e-121
Glyma18g10740.1                                                       333   2e-91
Glyma15g21330.1                                                       130   3e-30
Glyma18g10700.1                                                        58   2e-08

>Glyma14g02550.1 
          Length = 697

 Score =  518 bits (1335), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 267/410 (65%), Positives = 319/410 (77%), Gaps = 20/410 (4%)

Query: 26  MEAHATSLVSKARTAFHSAAAKAERVLMDFKSDLGEDSDKQSRHQS--GRLQGDDSAQKN 83
           ME    + VSKARTAFHSAAAKAERVL+DFKSD   D DKQS   +  G+    +S   +
Sbjct: 1   MEEEQQTFVSKARTAFHSAAAKAERVLLDFKSD--RDHDKQSSPNTFTGQQPEAESPHTD 58

Query: 84  EMESKLFNDLKHIKWRPLHIGKKQDWQDRIKNFRKGRKEIEDTDKVGDANITADALYDED 143
           E +SKL ++ KHIKWRP H+G KQDWQD+IKN R+GRKE+EDTDKVGDA++ A   YD++
Sbjct: 59  ENDSKLHSESKHIKWRPPHLGIKQDWQDKIKNIRRGRKEVEDTDKVGDASM-AIPFYDDN 117

Query: 144 WSIVNVRNDLNAKASEAILPELRRSGLAGTEAIPSVEGLTVATEDPIPPSSVLKQLALAV 203
             ++NV+NDL AKASEA+               PSVEGLT AT+DPIPPSSVLKQLA+AV
Sbjct: 118 LYLLNVKNDLEAKASEAM---------------PSVEGLTAATKDPIPPSSVLKQLAIAV 162

Query: 204 EAGRKTHSMKDFVASSGGSSPALEREGLSLSAIKALVLREKEEKLSSEFCSNEKVVYLIN 263
           EAG K  SMKD +AS GGSSPA ER GLSLSA+KALVLREKE+KL+SEF SNEKVV LIN
Sbjct: 163 EAGSKAKSMKDVIASPGGSSPARERAGLSLSAVKALVLREKEDKLTSEFTSNEKVVQLIN 222

Query: 264 SLFNPEGEFLRRKINSDPEEIALTSLPRDIHSAPPESLVVKLAEVIGNFKTVRKMALFWC 323
           SLF+PEG+FLRRKI+S+ EE A+TSLPRDIH APPESLVVKLAE++GN+KT+RKMALFWC
Sbjct: 223 SLFDPEGDFLRRKIDSNLEETAMTSLPRDIHGAPPESLVVKLAEILGNYKTLRKMALFWC 282

Query: 324 SVVTELRKLWSEDKHLPGXXXXXXXXLKSCLLYQQFQVINCCISRKRRHIIATEAVDSMV 383
            VV ELRKLW E+++LPG        LKSCLLYQQFQVINCCISRKR  IIATE++DSM+
Sbjct: 283 RVVAELRKLWFEEQYLPGVPQDEIPDLKSCLLYQQFQVINCCISRKRFRIIATESLDSMM 342

Query: 384 MEANSNTLKSGNHSDRTSATPVLYARISTGELVLRLGGSLPIWRSNIIGT 433
           M+ANS+  +S + S   SA+PVLYAR+++GELVLRLG   P     ++ T
Sbjct: 343 MQANSDIKESTDCSAEASASPVLYARLNSGELVLRLGADHPAGDMTLLET 392


>Glyma02g46190.1 
          Length = 696

 Score =  515 bits (1326), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 268/418 (64%), Positives = 317/418 (75%), Gaps = 19/418 (4%)

Query: 32  SLVSKARTAFHSAAAKAERVLMDFKSDLGEDSDKQSRHQS--GRLQGDDSAQKNEMESKL 89
           + VSKARTAFHSAAAKAERVL+DFKSD  ED DKQS   +  G+    +S   NE +SKL
Sbjct: 5   TFVSKARTAFHSAAAKAERVLLDFKSD-REDHDKQSSPNTFTGQQPEAESPHTNENDSKL 63

Query: 90  FNDLKHIKWRPLHIGKKQDWQDRIKNFRKGRKEIEDTDKVGDANITADALYDEDWSIVNV 149
            ++LKHIKWRP H+G KQDWQDRIKN R+GRKE+EDTDKVGDA++ A   YD++  ++N+
Sbjct: 64  RSELKHIKWRPPHLGIKQDWQDRIKNIRRGRKEVEDTDKVGDASM-AVPFYDDNLYLLNM 122

Query: 150 RNDLNAKASEAILPELRRSGLAGTEAIPSVEGLTVATEDPIPPSSVLKQLALAVEAGRKT 209
           +NDL AKASEAI               PSVE LT AT+DPIPPSSVLKQLA+AVEAG K 
Sbjct: 123 KNDLEAKASEAI---------------PSVESLTAATKDPIPPSSVLKQLAIAVEAGSKA 167

Query: 210 HSMKDFVASSGGSSPALEREGLSLSAIKALVLREKEEKLSSEFCSNEKVVYLINSLFNPE 269
            SMKD +ASSG SSPA ER GLS SA+KALVLREKE+KL+SEF SNEKVV LINSLF+PE
Sbjct: 168 KSMKDLIASSGVSSPARERAGLSFSAVKALVLREKEDKLTSEFTSNEKVVQLINSLFDPE 227

Query: 270 GEFLRRKINSDPEEIALTSLPRDIHSAPPESLVVKLAEVIGNFKTVRKMALFWCSVVTEL 329
           G+FLRRKINS+ EE A+TSLPRDIH APPESLVVKLAE++GN+KT+RKMALFWC VV EL
Sbjct: 228 GDFLRRKINSNLEETAMTSLPRDIHGAPPESLVVKLAEILGNYKTLRKMALFWCRVVAEL 287

Query: 330 RKLWSEDKHLPGXXXXXXXXLKSCLLYQQFQVINCCISRKRRHIIATEAVDSMVMEANSN 389
           RKLWSE+++LPG        LKSCLLYQ FQVINCCISRKR  IIATE++DSM+M+ANS+
Sbjct: 288 RKLWSEEQYLPGVPQNEIPDLKSCLLYQHFQVINCCISRKRFRIIATESLDSMMMQANSD 347

Query: 390 TLKSGNHSDRTSATPVLYARISTGELVLRLGGSLPIWRSNIIGTRRAYVHSYHAGGSL 447
             +S +      A+PVLYAR+++GELVLRLG   P     ++ T           G L
Sbjct: 348 IKESTDCCAGAPASPVLYARLNSGELVLRLGADHPAGDMTLLETGEPVYSPITQEGPL 405


>Glyma08g43140.1 
          Length = 627

 Score =  432 bits (1112), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 218/337 (64%), Positives = 256/337 (75%), Gaps = 35/337 (10%)

Query: 88  KLFNDLKHIKWRPLHIGKKQDWQDRIKNFRKGRKEIEDTDKVGDANITADALYDEDWSIV 147
           +  ++LKHIKWRP HIG KQDWQDRI N RKGRKE+E TDKVGD ++ +   YDE+  I+
Sbjct: 3   QFLDELKHIKWRPPHIGTKQDWQDRINNMRKGRKEVEVTDKVGDVSMASAPFYDENMYIL 62

Query: 148 NVRNDLNAKASEAILPELRRSGLAGTEAIPSVEGLTVATEDPIPPSSVLKQLALAVEAGR 207
           NV+NDL+AKASEAI               PSVEGLT AT+ PIPPSSVLKQLA+A+E+GR
Sbjct: 63  NVKNDLDAKASEAI---------------PSVEGLTAATKYPIPPSSVLKQLAIAIESGR 107

Query: 208 KTHSMKDFVASSGGSSPALEREGLSLSAIKALVLREKEEKLSSEFCSNEKVVYLINSLFN 267
           +T+SMKDFVASS GSSPA E+ GLSLS++KALVLREKE+KL+SEF S+EKVVYLINSLF+
Sbjct: 108 QTNSMKDFVASSRGSSPAREKAGLSLSSVKALVLREKEDKLTSEFSSDEKVVYLINSLFD 167

Query: 268 PEGEFLRRKINSDPEEIALTSLPRDIHSAPPESLVVKLAEVIGNFKTVRKMALFWCSVVT 327
            EGE                    DIH AP ESLVVKLAEVIGNFKT+R+M+LFW  VV 
Sbjct: 168 QEGE--------------------DIHGAPLESLVVKLAEVIGNFKTLREMSLFWSRVVD 207

Query: 328 ELRKLWSEDKHLPGXXXXXXXXLKSCLLYQQFQVINCCISRKRRHIIATEAVDSMVMEAN 387
           ELRK WSE+KHLPG        LKSCLLYQQFQVINCCISRK+RHIIATE++D+MVMEAN
Sbjct: 208 ELRKHWSEEKHLPGIPPDDIPDLKSCLLYQQFQVINCCISRKKRHIIATESLDTMVMEAN 267

Query: 388 SNTLKSGNHSDRTSATPVLYARISTGELVLRLGGSLP 424
           SN L+S N++ +    P+LYAR+ TGELVLRLG   P
Sbjct: 268 SNALESANYTGKIPTGPLLYARLRTGELVLRLGADCP 304


>Glyma18g10740.1 
          Length = 221

 Score =  333 bits (855), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 167/238 (70%), Positives = 194/238 (81%), Gaps = 19/238 (7%)

Query: 91  NDLKHIKWRPLHIGKKQDWQDRIKNFRKGRKEIEDTDKVGDANITADALYDEDWSIVNVR 150
           N+LKHIKWRP  IG KQDWQDRI N RKGRKE+E TDKVGD N+ +   YDE+  I+NV+
Sbjct: 3   NELKHIKWRPPGIGTKQDWQDRINNIRKGRKEVEVTDKVGDVNVGSVPFYDENLYILNVK 62

Query: 151 NDLNAKASEAILPELRRSGLAGTEAIPSVEGLTVATEDPIPPSSVLKQLALAVEAGRKTH 210
           NDL+AKASEAI               P+VEGLT AT+ PIPPSSVLKQLA+A+EAGR+T+
Sbjct: 63  NDLDAKASEAI---------------PTVEGLTAATKHPIPPSSVLKQLAIAIEAGRQTN 107

Query: 211 SMKDFVASSGGSSPALEREGLSLSAIKALVLREKEEKLSSEFCSNEKVVYLINSLFNPEG 270
           SMKDFVASS    PA E+ GLS+S++KALVLREKE+KL+SEF S+EKVVYLINSLF+ EG
Sbjct: 108 SMKDFVASS----PAREKAGLSISSVKALVLREKEDKLTSEFSSDEKVVYLINSLFDQEG 163

Query: 271 EFLRRKINSDPEEIALTSLPRDIHSAPPESLVVKLAEVIGNFKTVRKMALFWCSVVTE 328
           EFLRRKINSDPEE +++SLPRDIH APPESLVVKLAEVIGNFKT+R M+LFW  VV E
Sbjct: 164 EFLRRKINSDPEETSISSLPRDIHGAPPESLVVKLAEVIGNFKTLRGMSLFWSRVVDE 221


>Glyma15g21330.1 
          Length = 204

 Score =  130 bits (328), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/189 (44%), Positives = 110/189 (58%), Gaps = 43/189 (22%)

Query: 89  LFNDLKHIKWRPLHIGKKQDWQDRIKNFRKGRKEIEDTDKVGDANITADALYDEDWSIVN 148
             ++LKHIKWRP HIG KQ WQDR  N R+GRKE+E  DKVGD ++ +   YDE+  I+N
Sbjct: 55  FLDELKHIKWRPPHIGTKQGWQDRTNNMRRGRKEVEVIDKVGDVSMASTPFYDENMYILN 114

Query: 149 VRNDLNAKASEAILPELRRSGLAGTEAIPSVEGLTVATEDPIPPSSVLKQLALAVEAGRK 208
                                                       S++L+ L ++  A  +
Sbjct: 115 ----------------------------------------QCSFSNILEILIMS--AKWQ 132

Query: 209 THSMKDFVASSGGSSPALEREGLSLSAIKALVLREKEEKLSSEFCSNEKVVYLINSLFN- 267
           T+S+KDFVASS GSS A E+  LSLS +KALVLREKE+KL+SEF S+EKVV+LINSLF+ 
Sbjct: 133 TNSIKDFVASSRGSSSAREKANLSLSLVKALVLREKEDKLTSEFTSDEKVVFLINSLFDQ 192

Query: 268 PEGEFLRRK 276
            E   +RRK
Sbjct: 193 AEKTLVRRK 201


>Glyma18g10700.1 
          Length = 374

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/43 (62%), Positives = 31/43 (72%)

Query: 382 MVMEANSNTLKSGNHSDRTSATPVLYARISTGELVLRLGGSLP 424
           MVMEANSNT  S N+  R   +P+LYAR+ TGELVLRLG   P
Sbjct: 1   MVMEANSNTSDSANYMGRIPTSPLLYARLRTGELVLRLGADCP 43