Miyakogusa Predicted Gene
- Lj0g3v0338569.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0338569.1 tr|I1LSZ2|I1LSZ2_SOYBN Ubiquitin
carboxyl-terminal hydrolase OS=Glycine max GN=Gma.16950 PE=3
SV=1,84.92,0,Cysteine proteinases,NULL; UBA-like,UBA-like;
UBA,Ubiquitin-associated/translation elongation factor,CUFF.23161.1
(777 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma12g22240.1 1270 0.0
Glyma06g39770.1 1258 0.0
Glyma09g28830.1 97 8e-20
>Glyma12g22240.1
Length = 793
Score = 1270 bits (3286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 612/777 (78%), Positives = 659/777 (84%), Gaps = 15/777 (1%)
Query: 1 MITEPLDLLRSNLSRVRIPEPTNRIFKHECCVSFDTPKSEGGLFVDMSTFLAFGKEFVAW 60
M +PLDLLRSNLSRVRIPEPTNRI+KHECCVSFD+P+SEGGLFVDM TFLAFGK+FV W
Sbjct: 1 MTIQPLDLLRSNLSRVRIPEPTNRIYKHECCVSFDSPRSEGGLFVDMCTFLAFGKDFVGW 60
Query: 61 NYEKTGNPVYLHIKQTKKTDPEDRPTKKPTLLAIGVEGGFDNNEVEYEETHSVVILPDYV 120
NYEKTGNPVYLHIKQT K PEDRP+KKPTLLAIGV+GGFDNNE EYEETHSVVILP+YV
Sbjct: 61 NYEKTGNPVYLHIKQTNKLVPEDRPSKKPTLLAIGVDGGFDNNEPEYEETHSVVILPEYV 120
Query: 121 SLPFPSVELPEKVRLAVDAILLADGAERKDQLAAWTADTKKVSAYAMNLQQIDNGVVIPP 180
SLPFPSVELPEKVRLAVDAILLA+GAERK+QLAAWTAD KKVS+YA NLQQIDNGVVIPP
Sbjct: 121 SLPFPSVELPEKVRLAVDAILLAEGAERKEQLAAWTADKKKVSSYATNLQQIDNGVVIPP 180
Query: 181 SGWKCAKCDKKDNLWLNLTDGMMLCGRKNWDGTGGNNHAIQHYEQTGYPLAVKLGTITAD 240
SGWKCAKCDK DNLWLNLTDGM+LCGRK W GTGGNNHA++HY++TG+P+AVKLGTITAD
Sbjct: 181 SGWKCAKCDKTDNLWLNLTDGMILCGRKMWGGTGGNNHAVEHYQETGFPVAVKLGTITAD 240
Query: 241 LEAADVFSYPEDDSVLDPLLAQHLAFFGIDFSSLQKTEMTTAERELDRNTNFDWNRIQES 300
LEAADV+SYP+D+SVLDP LAQHLAFFGIDFSSL+KTEMTTAERELD+NTNFDWNRIQES
Sbjct: 241 LEAADVYSYPDDESVLDPQLAQHLAFFGIDFSSLRKTEMTTAERELDQNTNFDWNRIQES 300
Query: 301 GQDVDPIFGPGYTGLVNIGNSCYMAATMQVVFSTRSFIQRYYSNQSLKKAFDVSPADPTV 360
GQ+VDPIFGPGYTGLVNIGNSCYMAATMQVVFSTRSF RYY NQSLKKAF++SPADPTV
Sbjct: 301 GQEVDPIFGPGYTGLVNIGNSCYMAATMQVVFSTRSFTSRYYLNQSLKKAFEMSPADPTV 360
Query: 361 DLHMQLTKLAHGLLSGKYSVPAFENDDKENVATSTTTAKQQGIHPHMFKSVIAASHPEFS 420
DL+MQLTKLAHG+LSGKYSVPAFE KQ+GI PHMFKSVIAASHPEFS
Sbjct: 361 DLNMQLTKLAHGILSGKYSVPAFE--------------KQEGIRPHMFKSVIAASHPEFS 406
Query: 421 SVRQQDALEFFLHFIDQVERANAGKTELDPARSFKFGIEDKILCSSGKVAYNKRNDYILS 480
S RQQDALEFFLHF+DQVERANAGK ELDP+ SFKFGIED+ILCSSGKV YN+R+DYILS
Sbjct: 407 SPRQQDALEFFLHFLDQVERANAGKVELDPSTSFKFGIEDRILCSSGKVTYNRRHDYILS 466
Query: 481 LNIPLLEATNKEELASFQXXXXXXXXXXXXXXXDEIVRPRVPLEACLANFSAPEEIHDFY 540
LNIPL EATNKEEL SF +EIVRPRVPLE CLANFSAPEEIHDFY
Sbjct: 467 LNIPLHEATNKEELESFHKLKAEKLAEGKEINANEIVRPRVPLETCLANFSAPEEIHDFY 526
Query: 541 SXXXXXXXXXXXXXXXXSFPDYLVLHMRRFVMEVGWVPKKLXXXXXXXXXXXXSHMRSIG 600
S SFPDYLVLHMRRFVME WVPKKL SHMRS G
Sbjct: 527 STALKTKTTALKTAGLTSFPDYLVLHMRRFVMEADWVPKKLDVYIDVPDIIDISHMRSKG 586
Query: 601 HQTGEELLPDGAPDEEDSNKLVANEEIVSQLVSMGFNHLHCQKAAINTSNVGVEEAMNWL 660
Q+GEELLPDG P+EEDSNK+ AN+EIV+QLVSMGFNHLHCQKAAINTSNVGVEEAMNWL
Sbjct: 587 QQSGEELLPDGVPEEEDSNKISANDEIVAQLVSMGFNHLHCQKAAINTSNVGVEEAMNWL 646
Query: 661 LSHMDDPDIDNPIAESSETLTNVDQSKVDTLISFGFQEEIARKALKASGGDIEKATDWIF 720
LSHMDDPDIDNPI++ + T VDQSKVD LISFGF+EEIARKALKAS GDIEKATDWIF
Sbjct: 647 LSHMDDPDIDNPISKGHGSET-VDQSKVDILISFGFEEEIARKALKASDGDIEKATDWIF 705
Query: 721 TSPXXXXXXXXXXXXXXXXXHNDVSLPDGGGKYRLMGVVSHSGTSVHCGHYVAHILK 777
+ NDV+LPDGGGKYRLMG+VSHSGTS CGHYVAHILK
Sbjct: 706 NNLDASVSSMNAAPSTSASTTNDVNLPDGGGKYRLMGIVSHSGTSTQCGHYVAHILK 762
>Glyma06g39770.1
Length = 789
Score = 1258 bits (3256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 602/772 (77%), Positives = 653/772 (84%), Gaps = 14/772 (1%)
Query: 6 LDLLRSNLSRVRIPEPTNRIFKHECCVSFDTPKSEGGLFVDMSTFLAFGKEFVAWNYEKT 65
+DLLRS LSRVRIPEPTNRI+KHECC+SFD+P+SEGGLF+DM TFLAFGK+FV WNYEKT
Sbjct: 1 MDLLRSYLSRVRIPEPTNRIYKHECCISFDSPRSEGGLFIDMCTFLAFGKDFVGWNYEKT 60
Query: 66 GNPVYLHIKQTKKTDPEDRPTKKPTLLAIGVEGGFDNNEVEYEETHSVVILPDYVSLPFP 125
GNPVYLHIKQTKK PEDRP+KKPTLLAIGV+GGFDNNE EYEETHSVVILP+YVSLPFP
Sbjct: 61 GNPVYLHIKQTKKLVPEDRPSKKPTLLAIGVDGGFDNNEPEYEETHSVVILPEYVSLPFP 120
Query: 126 SVELPEKVRLAVDAILLADGAERKDQLAAWTADTKKVSAYAMNLQQIDNGVVIPPSGWKC 185
SVELPEKVRLAVDAI+LA+G ERK+QLAAWTAD KKVS+YA NLQQIDNGVVIPPSGWKC
Sbjct: 121 SVELPEKVRLAVDAIVLAEGTERKEQLAAWTADKKKVSSYATNLQQIDNGVVIPPSGWKC 180
Query: 186 AKCDKKDNLWLNLTDGMMLCGRKNWDGTGGNNHAIQHYEQTGYPLAVKLGTITADLEAAD 245
AKCDK DNLWLNLTDGM+LC RKNWDGTGGNNHA +HY++TGYP+AVKLGTITADLEAAD
Sbjct: 181 AKCDKADNLWLNLTDGMILCERKNWDGTGGNNHAFEHYQETGYPIAVKLGTITADLEAAD 240
Query: 246 VFSYPEDDSVLDPLLAQHLAFFGIDFSSLQKTEMTTAERELDRNTNFDWNRIQESGQDVD 305
V+SYP+D+SVLDP LAQHLAFFG+DFSSL+KTEMTTAERELD NTNFDWNRIQESGQ+VD
Sbjct: 241 VYSYPDDESVLDPQLAQHLAFFGLDFSSLRKTEMTTAERELDHNTNFDWNRIQESGQEVD 300
Query: 306 PIFGPGYTGLVNIGNSCYMAATMQVVFSTRSFIQRYYSNQSLKKAFDVSPADPTVDLHMQ 365
PIFGPGYTGLVNIGNSCYMAAT+QVVFSTRSF RYY NQSLKKAF++SPADPTVDL+MQ
Sbjct: 301 PIFGPGYTGLVNIGNSCYMAATIQVVFSTRSFTSRYYLNQSLKKAFEMSPADPTVDLNMQ 360
Query: 366 LTKLAHGLLSGKYSVPAFENDDKENVATSTTTAKQQGIHPHMFKSVIAASHPEFSSVRQQ 425
LTKLAHG+LSGKYSVPAFE KQ+GI PHMFKSVIAASHPEFSS +QQ
Sbjct: 361 LTKLAHGILSGKYSVPAFE--------------KQEGIRPHMFKSVIAASHPEFSSTQQQ 406
Query: 426 DALEFFLHFIDQVERANAGKTELDPARSFKFGIEDKILCSSGKVAYNKRNDYILSLNIPL 485
DALEFFLHF+DQVERAN GKTELDP+RSFKFGIED+ILCSSGKV YN+RNDYILSLNIPL
Sbjct: 407 DALEFFLHFLDQVERANTGKTELDPSRSFKFGIEDRILCSSGKVTYNRRNDYILSLNIPL 466
Query: 486 LEATNKEELASFQXXXXXXXXXXXXXXXDEIVRPRVPLEACLANFSAPEEIHDFYSXXXX 545
EATN+EEL SF +EIVRPRVPLE CL NFSAPEEI DFYS
Sbjct: 467 HEATNEEELESFHKLKAEKLAEGKEINANEIVRPRVPLETCLVNFSAPEEIQDFYSTALK 526
Query: 546 XXXXXXXXXXXXSFPDYLVLHMRRFVMEVGWVPKKLXXXXXXXXXXXXSHMRSIGHQTGE 605
SFPDYLVLHMRRFVME G PKKL SHMRS G Q+GE
Sbjct: 527 AKTTALKTAGLTSFPDYLVLHMRRFVMEAGREPKKLDVHIDVPDIIDISHMRSKGQQSGE 586
Query: 606 ELLPDGAPDEEDSNKLVANEEIVSQLVSMGFNHLHCQKAAINTSNVGVEEAMNWLLSHMD 665
ELLPDG P E+DSNK+ ANEEIV+QLVSMGFNHLHCQKAAINTSNVGVEEAMNWLLSHMD
Sbjct: 587 ELLPDGVPGEQDSNKISANEEIVAQLVSMGFNHLHCQKAAINTSNVGVEEAMNWLLSHMD 646
Query: 666 DPDIDNPIAESSETLTNVDQSKVDTLISFGFQEEIARKALKASGGDIEKATDWIFTSPXX 725
DPDIDNPI++ + T VDQSKVD LISFGF+EEIAR ALKASGGDIEKATDWIF +P
Sbjct: 647 DPDIDNPISKGHGSETIVDQSKVDILISFGFEEEIARNALKASGGDIEKATDWIFNNPDA 706
Query: 726 XXXXXXXXXXXXXXXHNDVSLPDGGGKYRLMGVVSHSGTSVHCGHYVAHILK 777
NDV+LPDGGGKYRLMG++SHSGTS+ CGHYVAHILK
Sbjct: 707 SVSSMDASPSNAESTTNDVNLPDGGGKYRLMGILSHSGTSLQCGHYVAHILK 758
>Glyma09g28830.1
Length = 155
Score = 96.7 bits (239), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 69/107 (64%), Gaps = 4/107 (3%)
Query: 394 STTTAKQQGI---HPHMFKSVIAASHPEFSSVRQQDALEF-FLHFIDQVERANAGKTELD 449
+ T A QQG+ H MF V ++ + + F ++ I+ E NA K ELD
Sbjct: 16 TQTDAPQQGLQVLHIVMFDVVEYLAYTDGAITEHWMLYNFSYIFLINLRELINAAKVELD 75
Query: 450 PARSFKFGIEDKILCSSGKVAYNKRNDYILSLNIPLLEATNKEELAS 496
P+ SFKFGIED+ILCSSGKV YN ++DYI+SLNIPL EATNKEEL S
Sbjct: 76 PSTSFKFGIEDRILCSSGKVTYNTQHDYIVSLNIPLHEATNKEELQS 122