Miyakogusa Predicted Gene

Lj0g3v0337679.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0337679.2 Non Chatacterized Hit- tr|D8QPI1|D8QPI1_SELML
Putative uncharacterized protein OS=Selaginella
moelle,44.64,0.00000000005,Homeodomain-like,Homeodomain-like; no
description,Homeodomain-like; Homeobox,Homeodomain;
HOMEOBOX_2,CUFF.23085.2
         (164 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g07330.1                                                       222   1e-58
Glyma04g07230.1                                                       218   3e-57

>Glyma06g07330.1 
          Length = 338

 Score =  222 bits (566), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 113/163 (69%), Positives = 125/163 (76%), Gaps = 2/163 (1%)

Query: 1   MKKLARALKTGRRKTSIKSLAAELCLDRAXXXXXXXXXXXXXXXXXXXXXDEPPATVV-- 58
           MKKLARALK GRRKTSIK+LAA+LCLDRA                     DEP  TVV  
Sbjct: 174 MKKLARALKAGRRKTSIKNLAADLCLDRALVLQMLRDPPPNLLMMSLTIPDEPATTVVSL 233

Query: 59  ESKLGETIINETSLDSGESEPKAQVPIHTMQRSWSAQKRLKKAHVDTLERVYRRSKRPTN 118
           E+K  E +  ETS+D  E EPKA+VP+HT+QR+W AQKRLKKAHVDTLERVYRRSKRPTN
Sbjct: 234 ETKPSEIVHKETSIDHAEPEPKAKVPVHTLQRNWHAQKRLKKAHVDTLERVYRRSKRPTN 293

Query: 119 TMISSIVHVTNIPRRKVVKWFEDKRAEDGVPDRRLPYQRSTAE 161
            MISSIVHVTNIPR+KVVKWFEDKRAE+GVPDRR+PYQRS  E
Sbjct: 294 AMISSIVHVTNIPRKKVVKWFEDKRAEEGVPDRRVPYQRSVPE 336


>Glyma04g07230.1 
          Length = 322

 Score =  218 bits (554), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 114/165 (69%), Positives = 126/165 (76%), Gaps = 4/165 (2%)

Query: 1   MKKLARALKTGRRKTSIKSLAAELCLDRAXXXXXXXXXXXXXXXXXXXXXDEPPATVV-- 58
           MKKLARALK GRRKTSIK+LAA+LCLDRA                     DEP  TVV  
Sbjct: 156 MKKLARALKAGRRKTSIKNLAADLCLDRALVLQLLRDPPPNLLMMSLSIPDEPTTTVVSL 215

Query: 59  ESKLGETIINETSLDSGE--SEPKAQVPIHTMQRSWSAQKRLKKAHVDTLERVYRRSKRP 116
           E+K  E +  ETS+D  E  SEPKA+VP+HT+QR+W AQKRLKKAHVDTLERVYRRSKRP
Sbjct: 216 ETKPSEIVHKETSIDHAEIESEPKAKVPVHTLQRNWHAQKRLKKAHVDTLERVYRRSKRP 275

Query: 117 TNTMISSIVHVTNIPRRKVVKWFEDKRAEDGVPDRRLPYQRSTAE 161
           TN MISSIVHVTNIPR+KVVKWFEDKRAE+GVPDRR+PYQRS  E
Sbjct: 276 TNAMISSIVHVTNIPRKKVVKWFEDKRAEEGVPDRRVPYQRSVPE 320