Miyakogusa Predicted Gene

Lj0g3v0336789.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0336789.1 tr|D8QTN2|D8QTN2_SELML Site-determining protein
OS=Selaginella moellendorffii GN=SELMODRAFT_131305 P,80.7,3e-19,no
description,NULL; SUBFAMILY NOT NAMED,ATP binding protein MinD; FAMILY
NOT NAMED,NULL; seg,NULL; ,CUFF.23021.1
         (119 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g29810.1                                                        91   3e-19
Glyma11g16170.1                                                        85   1e-17
Glyma20g08350.1                                                        70   4e-13
Glyma08g24520.1                                                        70   5e-13
Glyma09g24580.1                                                        70   5e-13
Glyma04g38780.1                                                        66   8e-12
Glyma14g09490.1                                                        60   4e-10
Glyma15g22490.1                                                        60   4e-10
Glyma03g17930.1                                                        52   1e-07
Glyma08g26360.1                                                        47   4e-06

>Glyma16g29810.1 
          Length = 324

 Score = 90.9 bits (224), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 53/99 (53%), Positives = 59/99 (59%), Gaps = 4/99 (4%)

Query: 4   SLHPLPNANLSFSHSTLLHHPSFPFTPSKSLIPTPKSKPYPTKALLQWNRKPQLAGETPR 63
           SLH LP A  +  +S  L  P  P  PSK+L P    KP P  ALLQWNRKP+L+G TPR
Sbjct: 3   SLHLLPGATTA-PNSAFLLRPHSPLFPSKTLTP---KKPKPPSALLQWNRKPELSGSTPR 58

Query: 64  XXXXXXXXXXXXXXXXXANMGLSLARLGFSVVAIDADVG 102
                            AN+GLSLARLGFSVVAIDADVG
Sbjct: 59  VAVITSGKGGVGKTTTTANIGLSLARLGFSVVAIDADVG 97


>Glyma11g16170.1 
          Length = 141

 Score = 85.1 bits (209), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 46/89 (51%), Positives = 52/89 (58%), Gaps = 3/89 (3%)

Query: 22  HHPSFPFTPSKSLIPTPKSKPYPTKALLQWNRKPQLAGETPRXXXXXXXXXXXXXXXXXA 81
           H P  P  PSK+L P     P P   LLQWNRKP+L+  TPR                 A
Sbjct: 53  HRPHSPLFPSKTLTP---KNPKPPSTLLQWNRKPELSSSTPRVAVITSSKGGVGKTTTTA 109

Query: 82  NMGLSLARLGFSVVAIDADVGLRNLDLLL 110
           N+ LSL RLGF VVAI+AD+GLRNLDLLL
Sbjct: 110 NISLSLTRLGFFVVAINADIGLRNLDLLL 138


>Glyma20g08350.1 
          Length = 271

 Score = 70.5 bits (171), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 51/95 (53%), Gaps = 4/95 (4%)

Query: 17  HSTLLHHPSFPFTPSKSL-IPTPKSKPYPTKALLQWNRKPQLAGETPRXXXXXXXXXXXX 75
           +S  L  P     PSK+L +  PKSK     ++ QWNRKP+L G TP             
Sbjct: 58  NSVFLLRPHSSLFPSKTLTLKKPKSKHL---SIFQWNRKPELFGSTPHVTVITSGKGSVG 114

Query: 76  XXXXXANMGLSLARLGFSVVAIDADVGLRNLDLLL 110
                AN+ LS  R+ FSV+AIDADVG  NLDLLL
Sbjct: 115 RTTTHANIDLSFTRVDFSVIAIDADVGFHNLDLLL 149


>Glyma08g24520.1 
          Length = 202

 Score = 70.1 bits (170), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 36/62 (58%), Positives = 38/62 (61%)

Query: 49  LQWNRKPQLAGETPRXXXXXXXXXXXXXXXXXANMGLSLARLGFSVVAIDADVGLRNLDL 108
           LQWNRKP+L G  P                  AN+GLSLA LGFSVVAID DV LRNLDL
Sbjct: 6   LQWNRKPELFGSIPCVAGITSSKGGVSKTTTTANIGLSLACLGFSVVAIDVDVSLRNLDL 65

Query: 109 LL 110
           LL
Sbjct: 66  LL 67


>Glyma09g24580.1 
          Length = 282

 Score = 70.1 bits (170), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 34/56 (60%), Positives = 37/56 (66%)

Query: 47  ALLQWNRKPQLAGETPRXXXXXXXXXXXXXXXXXANMGLSLARLGFSVVAIDADVG 102
           ALLQWNRKP+L+G  PR                 AN+GLSLARLGFSVVAIDADVG
Sbjct: 1   ALLQWNRKPELSGSIPRVTVITSGKGGVGKTTTTANIGLSLARLGFSVVAIDADVG 56


>Glyma04g38780.1 
          Length = 153

 Score = 66.2 bits (160), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 34/69 (49%), Positives = 40/69 (57%)

Query: 49  LQWNRKPQLAGETPRXXXXXXXXXXXXXXXXXANMGLSLARLGFSVVAIDADVGLRNLDL 108
           LQWN KP+ +  TP                  AN+GL LARLGFSVVAIDADV LRNLDL
Sbjct: 6   LQWNHKPKFSDTTPCVVVITSGKGGVGKTTTIANIGLFLARLGFSVVAIDADVDLRNLDL 65

Query: 109 LLRESRQLH 117
           L     +++
Sbjct: 66  LFGLENRIN 74


>Glyma14g09490.1 
          Length = 103

 Score = 60.5 bits (145), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 41/75 (54%), Gaps = 3/75 (4%)

Query: 31  SKSLIPTPKSKPYPTKALLQWNRKPQLAGETPRXXXXXXXXXXXXXXXXXANMGLSLARL 90
           SK+L P    K  P+ ALLQWN KP+L G TP                  A+  LSLA L
Sbjct: 15  SKTLTP---KKHKPSSALLQWNHKPKLFGSTPYIAVITSNKGSVGKTTTTASFDLSLACL 71

Query: 91  GFSVVAIDADVGLRN 105
           GFS+V I A++GLRN
Sbjct: 72  GFSIVVIVANIGLRN 86


>Glyma15g22490.1 
          Length = 84

 Score = 60.5 bits (145), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 33/64 (51%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 51  WNRKPQLAGETPRXXXXXXXXXXXXXXXXXANMGLSLARLGFSVVAIDADVGLRNLDLLL 110
           WN KP+L+   PR                 AN+GLSLARLGFS+VAID +VGLRNL LL 
Sbjct: 1   WNCKPELSDFIPRVAVITSSKGSVGKTTTTANIGLSLARLGFSIVAIDVNVGLRNL-LLG 59

Query: 111 RESR 114
            E+R
Sbjct: 60  LENR 63


>Glyma03g17930.1 
          Length = 55

 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 32/55 (58%)

Query: 55  PQLAGETPRXXXXXXXXXXXXXXXXXANMGLSLARLGFSVVAIDADVGLRNLDLL 109
           P+L+G TPR                 AN  LSLA LGF VVAI+ADVGL NLDLL
Sbjct: 1   PKLSGSTPRIAFITSGKGGMGKTTTMANTVLSLAHLGFFVVAINADVGLCNLDLL 55


>Glyma08g26360.1 
          Length = 62

 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/29 (86%), Positives = 25/29 (86%)

Query: 82  NMGLSLARLGFSVVAIDADVGLRNLDLLL 110
           N GLSLARLGF VVAIDADV L NLDLLL
Sbjct: 18  NNGLSLARLGFFVVAIDADVSLCNLDLLL 46