Miyakogusa Predicted Gene

Lj0g3v0336649.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0336649.1 Non Chatacterized Hit- tr|G7ISV8|G7ISV8_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,54.17,3e-18,
,CUFF.23012.1
         (106 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g34410.1                                                        82   1e-16
Glyma14g02900.1                                                        74   3e-14
Glyma02g25270.1                                                        55   2e-08

>Glyma10g34410.1 
          Length = 441

 Score = 82.0 bits (201), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/98 (47%), Positives = 64/98 (65%), Gaps = 5/98 (5%)

Query: 1   MGDEKVGLKRLVIDKCLFKF-DYILFNAPNLEYFKYSGRVWTSYITIDRDVMKGAEIDF- 58
           M  ++VGL+RLVIDKC F   DY+   APNL++ KYSG++    +    +V++ A++DF 
Sbjct: 223 MRTQEVGLRRLVIDKCHFVISDYVDLRAPNLKFLKYSGKLGIFEVKALPEVVQEAQLDFT 282

Query: 59  PFEFEREFNEYGDELYTILSDFYPVRVLTVCSVLLQVI 96
           P     +F EYGDEL  +L D   VRVLTVCS LLQ +
Sbjct: 283 PMP---KFEEYGDELCQLLLDLSGVRVLTVCSFLLQAL 317


>Glyma14g02900.1 
          Length = 444

 Score = 74.3 bits (181), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 57/94 (60%), Gaps = 2/94 (2%)

Query: 3   DEKVGLKRLVIDKCLFKFDYILFNAPNLEYFKYSGRVWTSYITIDRDVMKGAEIDFPFEF 62
           +E  GL++LV+DKC F+FD    NAP+L+ F+Y G +      I    M+ A IDF  E+
Sbjct: 218 EEHTGLRKLVLDKCRFEFDVFKVNAPDLKIFQYCGLMNFFITEIHSPAMEEANIDFSPEY 277

Query: 63  EREFNEYGDELYTILSDFYPVRVLTVCSVLLQVI 96
              F   G  LY ++ + + VRVLTVCS +LQVI
Sbjct: 278 --GFEGLGHPLYNLVENLFIVRVLTVCSFVLQVI 309


>Glyma02g25270.1 
          Length = 406

 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 2/106 (1%)

Query: 1   MGDEKVGLKRLVIDKCLFKFDYILFNAPNLEYFKYSGRVWTSYITIDRDVMKGAEIDFPF 60
           +G E + LKRLV+DKC F+      +APNL +FKY G++   +   +   ++ A + F  
Sbjct: 221 IGSEALSLKRLVVDKCSFRNALFKVSAPNLCFFKYFGKL-CFFEMKNTLAIEEAHLHFYL 279

Query: 61  EFEREFNEYGDELYTILSDFYPVRVLTVCSVLLQVILYSSLFSHNL 106
            ++         LY ++ D Y  RVLTVC  L+Q+ +   + + +L
Sbjct: 280 GYD-NVGTGARVLYDLVKDLYNARVLTVCPYLIQIRMERDMNARHL 324