Miyakogusa Predicted Gene

Lj0g3v0335949.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0335949.1 Non Chatacterized Hit- tr|B9FDR6|B9FDR6_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,83.33,0.00000002, ,CUFF.22960.1
         (67 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g38290.1                                                       132   7e-32
Glyma14g38290.2                                                       132   8e-32
Glyma14g38300.1                                                        54   4e-08

>Glyma14g38290.1 
          Length = 440

 Score =  132 bits (333), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 59/61 (96%), Positives = 60/61 (98%)

Query: 1   MMGGLNDKEINHTYVKVISQMPYFRLSGGRDHIFVFPSGAGAHLFKSWATYINRSIILTP 60
           MMGGLNDKEIN TYVKVISQMPYFRLSGGR+HIFVFPSGAGAHLFKSWATYINRSIILTP
Sbjct: 138 MMGGLNDKEINSTYVKVISQMPYFRLSGGRNHIFVFPSGAGAHLFKSWATYINRSIILTP 197

Query: 61  E 61
           E
Sbjct: 198 E 198


>Glyma14g38290.2 
          Length = 396

 Score =  132 bits (332), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 59/61 (96%), Positives = 60/61 (98%)

Query: 1   MMGGLNDKEINHTYVKVISQMPYFRLSGGRDHIFVFPSGAGAHLFKSWATYINRSIILTP 60
           MMGGLNDKEIN TYVKVISQMPYFRLSGGR+HIFVFPSGAGAHLFKSWATYINRSIILTP
Sbjct: 138 MMGGLNDKEINSTYVKVISQMPYFRLSGGRNHIFVFPSGAGAHLFKSWATYINRSIILTP 197

Query: 61  E 61
           E
Sbjct: 198 E 198


>Glyma14g38300.1 
          Length = 125

 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 26/49 (53%), Positives = 30/49 (61%)

Query: 2  MGGLNDKEINHTYVKVISQMPYFRLSGGRDHIFVFPSGAGAHLFKSWAT 50
          + GL+DKEI HT+VKVISQ          +HIFVFP       FKSWAT
Sbjct: 7  LSGLDDKEIYHTFVKVISQCHMLAYLEAINHIFVFPEELVLPFFKSWAT 55