Miyakogusa Predicted Gene

Lj0g3v0335449.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0335449.1 Non Chatacterized Hit- tr|I3SB82|I3SB82_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,76.47,0.00000000001,no description,NAD(P)-binding
domain,CUFF.22912.1
         (59 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g02330.1                                                        71   3e-13
Glyma11g36080.1                                                        65   1e-11
Glyma11g36080.2                                                        65   1e-11

>Glyma18g02330.1 
          Length = 284

 Score = 70.9 bits (172), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/52 (71%), Positives = 41/52 (78%), Gaps = 2/52 (3%)

Query: 1   MVVAVVPHMATRKQGKIVNIGSNSALASGPRSSAY--SNDALHAMTDTSRFS 50
           MV AVVPHMAT+K+GKIVNIGS +ALASGP S AY  S  ALHA+TDT R  
Sbjct: 124 MVQAVVPHMATKKKGKIVNIGSVAALASGPWSGAYTASKAALHALTDTLRLE 175


>Glyma11g36080.1 
          Length = 392

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/52 (63%), Positives = 37/52 (71%), Gaps = 2/52 (3%)

Query: 1   MVVAVVPHMATRKQGKIVNIGSNSALASGPRSSAY--SNDALHAMTDTSRFS 50
           M+ AVVPHMA RK+G+IVN+GS  ALASGP S  Y  S  ALHA TDT R  
Sbjct: 126 MIQAVVPHMAVRKEGEIVNVGSVGALASGPWSGTYNASKAALHAFTDTLRLE 177



 Score = 59.7 bits (143), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 33/50 (66%), Positives = 35/50 (70%), Gaps = 2/50 (4%)

Query: 1   MVVAVVPHMATRKQGKIVNIGSNSALASGPRSSAY--SNDALHAMTDTSR 48
           M+  VVPHMAT KQGKI+NIG  SALASG  S  Y  S  ALHA TDT R
Sbjct: 320 MIRLVVPHMATWKQGKILNIGGVSALASGLWSGTYNASKAALHAFTDTLR 369


>Glyma11g36080.2 
          Length = 286

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/52 (63%), Positives = 37/52 (71%), Gaps = 2/52 (3%)

Query: 1   MVVAVVPHMATRKQGKIVNIGSNSALASGPRSSAY--SNDALHAMTDTSRFS 50
           M+ AVVPHMA RK+G+IVN+GS  ALASGP S  Y  S  ALHA TDT R  
Sbjct: 126 MIQAVVPHMAVRKEGEIVNVGSVGALASGPWSGTYNASKAALHAFTDTLRLE 177