Miyakogusa Predicted Gene

Lj0g3v0335059.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0335059.1 Non Chatacterized Hit- tr|C5YDD7|C5YDD7_SORBI
Putative uncharacterized protein Sb06g004500
OS=Sorghu,59.7,3e-19,UPF0172,Uncharacterised protein family UPF0172;
GB DEF: HYPOTHETICAL UPF0172 PROTEIN AT5G55940,NULL;,CUFF.22886.1
         (67 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g01600.1                                                        93   7e-20
Glyma02g47150.1                                                        92   1e-19

>Glyma14g01600.1 
          Length = 204

 Score = 92.8 bits (229), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 50/67 (74%)

Query: 1   MQLYVRDASKNWKLVPSDGNSRFSLKEPSANLVLSDYISSEKWNNIVXXXXXXXXXXXXX 60
           MQLYVRD SKNWKLV SDGN+RFSLKEPSANLVL DYI+SEKWN+IV             
Sbjct: 138 MQLYVRDTSKNWKLVQSDGNNRFSLKEPSANLVLLDYIASEKWNDIVDFDDHLDDISKDW 197

Query: 61  XNPGLFN 67
            NPGLFN
Sbjct: 198 VNPGLFN 204


>Glyma02g47150.1 
          Length = 204

 Score = 92.0 bits (227), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 50/67 (74%)

Query: 1   MQLYVRDASKNWKLVPSDGNSRFSLKEPSANLVLSDYISSEKWNNIVXXXXXXXXXXXXX 60
           MQLYVRD SKNWKLV SDGN+RFSLKEPSANLVL DYI+SEKWN++V             
Sbjct: 138 MQLYVRDTSKNWKLVQSDGNNRFSLKEPSANLVLLDYIASEKWNDVVDFDDHLDDISKDW 197

Query: 61  XNPGLFN 67
            NPGLFN
Sbjct: 198 LNPGLFN 204