Miyakogusa Predicted Gene
- Lj0g3v0334929.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0334929.1 Non Chatacterized Hit- tr|I1MF12|I1MF12_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13812
PE,71.43,2e-19,N7-RELATED PROTEIN,NULL; F-BOX/LEUCINE RICH REPEAT
PROTEIN,NULL; no description,NULL,CUFF.22866.1
(65 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma15g09890.1 99 7e-22
Glyma13g29200.1 97 5e-21
Glyma04g10850.2 54 5e-08
Glyma04g10850.1 54 5e-08
Glyma06g10680.3 51 3e-07
Glyma06g10680.2 51 3e-07
Glyma06g10680.1 51 3e-07
Glyma02g36660.2 50 7e-07
Glyma02g36660.1 50 7e-07
>Glyma15g09890.1
Length = 318
Score = 99.4 bits (246), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 50/70 (71%), Positives = 56/70 (80%), Gaps = 8/70 (11%)
Query: 1 MGKCCPHLQVLKFNMQETKGY-----ECDDEAFAIAKTMPRLRHIQLLGNSLTNEGLLAI 55
+G+CC HL+ LKFNM KGY ECD+EAFAIA+TMP L H+QL GN LTNEGLLAI
Sbjct: 163 VGRCCRHLKTLKFNM---KGYRRPHIECDEEAFAIAETMPTLHHLQLFGNKLTNEGLLAI 219
Query: 56 LDGCPHLESL 65
LDGCPHLESL
Sbjct: 220 LDGCPHLESL 229
>Glyma13g29200.1
Length = 311
Score = 96.7 bits (239), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/70 (70%), Positives = 56/70 (80%), Gaps = 8/70 (11%)
Query: 1 MGKCCPHLQVLKFNMQETKGY-----ECDDEAFAIAKTMPRLRHIQLLGNSLTNEGLLAI 55
+G+CCPHL+ LKFNM+ GY ECD+EAFAIA+TMP L H+QL GN LTNEGLLAI
Sbjct: 155 IGQCCPHLKTLKFNME---GYRRPHIECDEEAFAIAETMPGLHHLQLFGNKLTNEGLLAI 211
Query: 56 LDGCPHLESL 65
LDGCP LESL
Sbjct: 212 LDGCPLLESL 221
>Glyma04g10850.2
Length = 321
Score = 53.5 bits (127), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 1 MGKCCPHLQVLKFNMQ----ETKGYECDDEAFAIAKTMPRLRHIQLLGNSLTNEGLLAIL 56
+GK C L+ L NM +K ++ DDEA+AIA TMP+L+H+++ + ++ G+L IL
Sbjct: 151 IGKNCKLLEGLCRNMHPLDTASKPFQ-DDEAYAIASTMPKLKHLEMAYHLISTSGVLQIL 209
Query: 57 DGCPHLESL 65
CP LE L
Sbjct: 210 ANCPKLEFL 218
>Glyma04g10850.1
Length = 321
Score = 53.5 bits (127), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 1 MGKCCPHLQVLKFNMQ----ETKGYECDDEAFAIAKTMPRLRHIQLLGNSLTNEGLLAIL 56
+GK C L+ L NM +K ++ DDEA+AIA TMP+L+H+++ + ++ G+L IL
Sbjct: 151 IGKNCKLLEGLCRNMHPLDTASKPFQ-DDEAYAIASTMPKLKHLEMAYHLISTSGVLQIL 209
Query: 57 DGCPHLESL 65
CP LE L
Sbjct: 210 ANCPKLEFL 218
>Glyma06g10680.3
Length = 321
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 1 MGKCCPHLQVLKFNMQETKGYEC---DDEAFAIAKTMPRLRHIQLLGNSLTNEGLLAILD 57
+GK C L+ L NM E DDEA+AIA TMP+L+H+++ + ++ G+L IL
Sbjct: 151 IGKNCKLLEGLCRNMHPLDTAEKPHQDDEAYAIASTMPKLKHLEMAYHLISTSGVLQILA 210
Query: 58 GCPHLESL 65
CP LE L
Sbjct: 211 NCPKLEFL 218
>Glyma06g10680.2
Length = 321
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 1 MGKCCPHLQVLKFNMQETKGYEC---DDEAFAIAKTMPRLRHIQLLGNSLTNEGLLAILD 57
+GK C L+ L NM E DDEA+AIA TMP+L+H+++ + ++ G+L IL
Sbjct: 151 IGKNCKLLEGLCRNMHPLDTAEKPHQDDEAYAIASTMPKLKHLEMAYHLISTSGVLQILA 210
Query: 58 GCPHLESL 65
CP LE L
Sbjct: 211 NCPKLEFL 218
>Glyma06g10680.1
Length = 321
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 1 MGKCCPHLQVLKFNMQETKGYEC---DDEAFAIAKTMPRLRHIQLLGNSLTNEGLLAILD 57
+GK C L+ L NM E DDEA+AIA TMP+L+H+++ + ++ G+L IL
Sbjct: 151 IGKNCKLLEGLCRNMHPLDTAEKPHQDDEAYAIASTMPKLKHLEMAYHLISTSGVLQILA 210
Query: 58 GCPHLESL 65
CP LE L
Sbjct: 211 NCPKLEFL 218
>Glyma02g36660.2
Length = 296
Score = 49.7 bits (117), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 17/82 (20%)
Query: 1 MGKCCPHLQVLKFNM------QETKGY-----------ECDDEAFAIAKTMPRLRHIQLL 43
+G+ CP+L+VLK N+ + +G + DDEA AIA +MP L +++
Sbjct: 155 IGRNCPNLKVLKRNLMNWLDPSQHRGIVPDDYLNACPQDGDDEAAAIANSMPGLEQLEIR 214
Query: 44 GNSLTNEGLLAILDGCPHLESL 65
+ LT +GL +I GCP+LE L
Sbjct: 215 FSKLTAKGLNSICQGCPNLEFL 236
>Glyma02g36660.1
Length = 306
Score = 49.7 bits (117), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 17/82 (20%)
Query: 1 MGKCCPHLQVLKFNM------QETKGY-----------ECDDEAFAIAKTMPRLRHIQLL 43
+G+ CP+L+VLK N+ + +G + DDEA AIA +MP L +++
Sbjct: 165 IGRNCPNLKVLKRNLMNWLDPSQHRGIVPDDYLNACPQDGDDEAAAIANSMPGLEQLEIR 224
Query: 44 GNSLTNEGLLAILDGCPHLESL 65
+ LT +GL +I GCP+LE L
Sbjct: 225 FSKLTAKGLNSICQGCPNLEFL 246