Miyakogusa Predicted Gene
- Lj0g3v0334409.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0334409.1 tr|B9I3A8|B9I3A8_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_570097 PE=4
SV=1,38.75,9e-18,seg,NULL,CUFF.22837.1
(433 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g10810.1 328 7e-90
Glyma20g15220.1 190 3e-48
Glyma20g15190.1 119 9e-27
Glyma20g14890.1 93 5e-19
Glyma20g34040.1 64 4e-10
Glyma19g00940.1 63 7e-10
Glyma10g33560.2 62 1e-09
Glyma10g33560.1 62 1e-09
Glyma13g20000.1 62 2e-09
Glyma05g08680.1 58 2e-08
Glyma19g16230.1 58 2e-08
Glyma10g05650.1 57 4e-08
Glyma16g07980.1 57 5e-08
Glyma10g22590.1 53 5e-07
Glyma02g09610.1 53 8e-07
Glyma17g32500.1 51 3e-06
>Glyma13g10810.1
Length = 742
Score = 328 bits (841), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 222/509 (43%), Positives = 287/509 (56%), Gaps = 88/509 (17%)
Query: 1 MSSSPEFINASPKELLSELHSKAVDCMFPTENKSFELVEWFFSRYRISTYHDEAELATSL 60
MSS +F+N+S +ELLS L+S AVDCMFP NKSF+LVE FF RYR+S YHDEAELATS
Sbjct: 116 MSSHNKFMNSSAEELLSGLYSTAVDCMFPVGNKSFDLVERFFCRYRVSNYHDEAELATSQ 175
Query: 61 VDEKGGKTGKRVGSNLLDIKSGKRKNNKMESSVKRKTKSLYGLSNMNINTSTGDSLR--- 117
V+ K K GK V ++LLD KS KRKNNK+E++V+RK KSL GLS++N++TS DS +
Sbjct: 176 VNAKEEKLGKSVCNDLLDTKSKKRKNNKIENAVRRKRKSLSGLSDVNVSTSNSDSQKPGR 235
Query: 118 -------------------LEINLNEGSSKGSSVTEAPQNLSCRTSKGKVGPKKRRKIEA 158
+EINL SSK SS +A QNL C S+GK K+R KIEA
Sbjct: 236 KLKQKRKVEEVTSVHQPQNVEINLIGNSSKYSSTPQASQNLCCLASEGKAVHKQREKIEA 295
Query: 159 P--QDPQIASVYTDVKGTKCSSLVIDLRL-SPHRPGVTLEK------------------- 196
Q QI S Y D K CSSLVIDL+ SP P E+
Sbjct: 296 QEHQSAQINSEYADAKRLNCSSLVIDLQFTSPPIPVDIPERNRSQNKEELVLLASNLESH 355
Query: 197 ----CFAGTTANHSLLVSTASEAGTVS-----QEVPIGNVAKHNFFENPA------SEGG 241
G+ +HSLLVST +E GTV + +G + + PA S G
Sbjct: 356 VSQEGHVGSITDHSLLVSTKAEVGTVMVNKTWLKNSMGKATRVHLNTKPAVGVPLNSMGK 415
Query: 242 ----------TISQQGLVGNISKHRLFXXXXXXXXXXXXNKTELKSTVEKQAEEHHHTKN 291
+ ++GL ++ K KT LK+++EK AE+ +TK
Sbjct: 416 AAGVHLNTKLAVEKKGLNNSMEK----PAEKPLNTKLAIGKTGLKNSIEKAAEKPLNTKV 471
Query: 292 VTELPDLNGICTESDLIRKEVETVNVLTPGFRPGKSRSLS-----GCSRPSNTDRVVETN 346
E+PDLNG E + I E +TV+ ++P F+ +SRS+S RP ++N
Sbjct: 472 AVEIPDLNGTGAECNSISTEFDTVHFVSPEFKLEQSRSVSIYQNYFLHRP-------DSN 524
Query: 347 GESQPGTFLHLQFSPGAYIPSKDELLTAFYQFGPLKASESQLFKGTGVAQIVFVRSTDAG 406
GES GT L L+F+P AYIPSK++L+T F +FGPLKASE+QL + G AQ+VFVRS DA
Sbjct: 525 GESL-GTCLLLKFAPVAYIPSKEDLMTTFCRFGPLKASETQLLRDNGSAQVVFVRSADAA 583
Query: 407 EAFHSLEKNK--PFGTALVDYKLHHLPAA 433
AFHS+E+N FG LVD+KLHHL AA
Sbjct: 584 VAFHSIEQNNKFAFGCTLVDFKLHHLSAA 612
>Glyma20g15220.1
Length = 707
Score = 190 bits (483), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 118/258 (45%), Positives = 155/258 (60%), Gaps = 20/258 (7%)
Query: 1 MSSSPEFINASPKELLSELHSKAVDCMFPTENKSFELVEWFFSRYRISTYHDEAELATSL 60
M S F+NAS +ELLS L S AVDCMFP NKSF+LVEWFF RYR+S YHDEAELATS
Sbjct: 115 MPSHYNFMNASAEELLSGLCSTAVDCMFPVGNKSFDLVEWFFCRYRVSNYHDEAELATSQ 174
Query: 61 VDEKGGKTGKRVGSNLLDIKSGKRKNNKMESSVKRKTKSLYGLSNMNINTSTGDSLRLEI 120
V+ K K GK G++L D KS KRK N+ME++V+RK KSL GLS++N+NTS GDS R
Sbjct: 175 VNAKEEKLGKPEGNDLPDTKSKKRKTNRMENAVRRKRKSLSGLSDVNVNTSNGDSQRPGR 234
Query: 121 NLNEGSSKGSSVTEAPQNLSCRTSKGKVGPKKRRKIEAP--QDPQIASVYTDVKGTKCSS 178
L + K VT Q + + +R KIEA Q QI SVYTD K CSS
Sbjct: 235 KLKQ-KRKVEEVTLVHQLQNVEINFIGSEHNQREKIEAQEHQTAQINSVYTDAKKLNCSS 293
Query: 179 LVIDLRLSPHRPGVTLEKCFAGTTANHSLLVSTASEAGTVSQEVPIGNVAKHNFFENPAS 238
LVIDL+ +P P + ++ + + VSQE P+G++ H+ + +
Sbjct: 294 LVIDLQFTP--PAIPVD-------------IPERNRKSRVSQEGPVGSITDHSLLVSTKA 338
Query: 239 EGGT--ISQQGLVGNISK 254
E GT +++ GL+ ++ K
Sbjct: 339 EVGTVMVNKTGLMNSMGK 356
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 112/165 (67%), Gaps = 16/165 (9%)
Query: 272 KTELKSTVEKQAEEHHHTKNVTELPDLNGICTESDLIRKEVETVNVLTPGFRPGKSRSLS 331
KT LK+++EK AE+ +TK E+PDLN E +T+N ++P + +S+SLS
Sbjct: 438 KTGLKNSMEKAAEKPLYTKVAVEIPDLN-----------EFDTLNFISPELKSEQSKSLS 486
Query: 332 GCSRPSNTDRV--VETNGESQPGTFLHLQFSPGAYIPSKDELLTAFYQFGPLKASESQLF 389
CSR + T ++ +GES GT + L+F+P AYIPSK++L+T F +FGPLKASE+QL
Sbjct: 487 ACSRSAKTTTCNRLDDSGESL-GTCVILKFAPVAYIPSKEDLMTTFCRFGPLKASETQLL 545
Query: 390 KGTGVAQIVFVRSTDAGEAFHSLEKNK--PFGTALVDYKLHHLPA 432
K TG AQ+VFVRS DA AFHS+E+N FG +LVD KLHHL A
Sbjct: 546 KDTGSAQVVFVRSEDAAAAFHSIEQNNKFAFGCSLVDCKLHHLSA 590
>Glyma20g15190.1
Length = 254
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 62/100 (62%), Positives = 73/100 (73%), Gaps = 4/100 (4%)
Query: 336 PSNTDRVVET--NGESQPGTFLHLQFSPGAYIPSKDELLTAFYQFGPLKASESQLFKGTG 393
P NT + + NGES GT L L FSPGAY+PSK++LLT FY+FGPLK E+QL K T
Sbjct: 55 PLNTKLAMHSPGNGESL-GTCLLLHFSPGAYLPSKEDLLTTFYRFGPLKVCETQLLKDTC 113
Query: 394 VAQIVFVRSTDAGEAFHSLEKNK-PFGTALVDYKLHHLPA 432
AQ+VFV+S DA AFHSLE N PFG+ LVDYKL+HL A
Sbjct: 114 SAQVVFVKSADAETAFHSLEYNNFPFGSTLVDYKLYHLSA 153
>Glyma20g14890.1
Length = 107
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 52/73 (71%)
Query: 3 SSPEFINASPKELLSELHSKAVDCMFPTENKSFELVEWFFSRYRISTYHDEAELATSLVD 62
+SPE INAS LLS L S AVDC FP NKSF LVE FF RYRIS YHDEAELA+SLV+
Sbjct: 19 TSPELINASAARLLSGLRSAAVDCTFPMGNKSFNLVEQFFGRYRISIYHDEAELASSLVN 78
Query: 63 EKGGKTGKRVGSN 75
K + GK S+
Sbjct: 79 AKEEEMGKAADSD 91
>Glyma20g34040.1
Length = 868
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 49/78 (62%)
Query: 355 LHLQFSPGAYIPSKDELLTAFYQFGPLKASESQLFKGTGVAQIVFVRSTDAGEAFHSLEK 414
L L F+ +PS+ L F +FGPL SE+++ +G+ A++VF + DA AF S +K
Sbjct: 771 LVLNFAELDSVPSEMRLNKIFRRFGPLNESETEVDRGSSRARVVFKKCVDAEVAFSSAKK 830
Query: 415 NKPFGTALVDYKLHHLPA 432
FG+ LV+YKL+H P+
Sbjct: 831 FNIFGSVLVNYKLNHTPS 848
>Glyma19g00940.1
Length = 801
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 346 NGESQPGTFLHLQFSPGAYIPSKDELLTAFYQFGPLKASESQLFKGTGVAQIVFVRSTDA 405
N E+ G L + F PG+ +PS+ +L++ + +FG L +E+ +F+ A++ F+R++DA
Sbjct: 627 NDENAAGAVLFVSFWPGSSMPSRSDLVSVYSKFGALNEAETDMFRTNYTARVSFLRTSDA 686
Query: 406 GEAFHSLEKNKPFGTAL-VDYKLHH 429
+A++ + N PFG+ V ++L +
Sbjct: 687 EKAYNHSQNNNPFGSPTDVTFQLQY 711
>Glyma10g33560.2
Length = 694
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 49/78 (62%)
Query: 355 LHLQFSPGAYIPSKDELLTAFYQFGPLKASESQLFKGTGVAQIVFVRSTDAGEAFHSLEK 414
L L F+ +PS+ L F +FGPL SE+++ +G+ A++VF + TDA AF + +
Sbjct: 597 LVLNFAELDSVPSEMHLNKIFRRFGPLNESETEVDRGSSRARVVFKKCTDAEVAFSNAKN 656
Query: 415 NKPFGTALVDYKLHHLPA 432
FG+ LV+YKL+H P+
Sbjct: 657 FNIFGSVLVNYKLNHTPS 674
>Glyma10g33560.1
Length = 823
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 49/78 (62%)
Query: 355 LHLQFSPGAYIPSKDELLTAFYQFGPLKASESQLFKGTGVAQIVFVRSTDAGEAFHSLEK 414
L L F+ +PS+ L F +FGPL SE+++ +G+ A++VF + TDA AF + +
Sbjct: 726 LVLNFAELDSVPSEMHLNKIFRRFGPLNESETEVDRGSSRARVVFKKCTDAEVAFSNAKN 785
Query: 415 NKPFGTALVDYKLHHLPA 432
FG+ LV+YKL+H P+
Sbjct: 786 FNIFGSVLVNYKLNHTPS 803
>Glyma13g20000.1
Length = 659
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 12/128 (9%)
Query: 316 NVLTPGFRPGKSRSLSGCSRPSNTDR---------VVETNGESQPG---TFLHLQFSPGA 363
N L+ +P + C + +TDR V +G S+ T L L+F+
Sbjct: 506 NPLSFKLQPSAETTTDLCYKQQDTDRNLGSESSKLVEHLDGSSKENFCPTALTLKFTNFD 565
Query: 364 YIPSKDELLTAFYQFGPLKASESQLFKGTGVAQIVFVRSTDAGEAFHSLEKNKPFGTALV 423
+PS +L F +FGPL S+++L + T A++VF R +DA AF S K FG +LV
Sbjct: 566 SVPSTTDLNNIFGRFGPLIESKTELLERTNRARVVFQRRSDAETAFSSAGKYSIFGPSLV 625
Query: 424 DYKLHHLP 431
Y+L LP
Sbjct: 626 SYRLKILP 633
>Glyma05g08680.1
Length = 1049
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 352 GTFLHLQFSPGAYIPSKDELLTAFYQFGPLKASESQLFKGTGVAQIVFVRSTDAGEAFHS 411
G L + F PG+ +PS+ +L++ + +FG L +E+ +F A++ F+R++DA +A++
Sbjct: 886 GAVLFVSFWPGSSMPSRSDLVSVYSKFGALNEAETDMFCTNYTARVSFLRTSDAEKAYNH 945
Query: 412 LEKNKPFGTAL-VDYKLHH 429
+ N PFG+ V ++L +
Sbjct: 946 SQNNNPFGSPTDVTFQLQY 964
>Glyma19g16230.1
Length = 800
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%)
Query: 352 GTFLHLQFSPGAYIPSKDELLTAFYQFGPLKASESQLFKGTGVAQIVFVRSTDAGEAFHS 411
G L + F PG+ +PS +L T + +FG L SE+ + A++ F++++DA +A
Sbjct: 636 GASLFISFGPGSSLPSNSDLTTLYGKFGALNESETSMLSSDCTARVFFLKASDAEKALSH 695
Query: 412 LEKNKPFGTALVDYKLHHLPAA 433
+ PFG++ ++L +L A
Sbjct: 696 SQNMNPFGSSEASFRLEYLSAG 717
>Glyma10g05650.1
Length = 453
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 347 GESQPG---TFLHLQFSPGAYIPSKDELLTAFYQFGPLKASESQLFKGTGVAQIVFVRST 403
G SQ G T L L+F+ +PS +L F +FG L S+++L + T A++VF R +
Sbjct: 340 GSSQEGFCPTALTLKFTNLDSVPSTTDLNKIFARFGSLIESKTELLERTNRARVVFQRRS 399
Query: 404 DAGEAFHSLEKNKPFGTALVDYKLHHLP 431
DA AF S K FG +LV Y+L LP
Sbjct: 400 DAEAAFSSAGKYSIFGPSLVSYRLKILP 427
>Glyma16g07980.1
Length = 766
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 48/82 (58%)
Query: 352 GTFLHLQFSPGAYIPSKDELLTAFYQFGPLKASESQLFKGTGVAQIVFVRSTDAGEAFHS 411
G L + F PG+ +PSK +L+T + +FG L SE+ +F A++ F+++++A +A
Sbjct: 632 GAALFVSFEPGSSLPSKSDLITLYGKFGALNESETAMFASDYTARVFFLKASNAEKALSH 691
Query: 412 LEKNKPFGTALVDYKLHHLPAA 433
+ PF ++ ++L +L A
Sbjct: 692 SQNLNPFDSSGASFRLEYLSAG 713
>Glyma10g22590.1
Length = 737
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%)
Query: 355 LHLQFSPGAYIPSKDELLTAFYQFGPLKASESQLFKGTGVAQIVFVRSTDAGEAFHSLEK 414
L + F+ +PS+ L F FGPLK +E+++ + A++VF + DA A S +K
Sbjct: 620 LVMNFAELGSVPSETNLNKMFRHFGPLKEAETEVDTVSSRARVVFKKCVDAEVACSSAQK 679
Query: 415 NKPFGTALVDYKLHHLPAA 433
FG+ LV+Y+L++ P+A
Sbjct: 680 FNIFGSILVNYQLNYTPSA 698
>Glyma02g09610.1
Length = 729
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%)
Query: 355 LHLQFSPGAYIPSKDELLTAFYQFGPLKASESQLFKGTGVAQIVFVRSTDAGEAFHSLEK 414
L + F+ +PS+ L F +FGPLK +E+++ + A++VF + DA A S +K
Sbjct: 612 LVMNFAELGSVPSETNLNKMFRRFGPLKEAETEVDTVSSRARVVFKKCVDAEVACSSAQK 671
Query: 415 NKPFGTALVDYKLHHLPAA 433
FG LV+Y+L++ P+A
Sbjct: 672 FNIFGPILVNYQLNYTPSA 690
>Glyma17g32500.1
Length = 452
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 40/59 (67%)
Query: 362 GAYIPSKDELLTAFYQFGPLKASESQLFKGTGVAQIVFVRSTDAGEAFHSLEKNKPFGT 420
G +PS+ +L++ F +FG L +E+ +F+ A++ F+R++DA +A++ + N PFG+
Sbjct: 391 GFSMPSRSDLVSVFSKFGALNEAETNMFRTNYTARVSFLRTSDAQKAYNHSQNNNPFGS 449