Miyakogusa Predicted Gene
- Lj0g3v0334259.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0334259.1 tr|C1FHQ2|C1FHQ2_MICSR Predicted protein
OS=Micromonas sp. (strain RCC299 / NOUM17) GN=MICPUN_62160
,36.21,1e-18,no description,ssDNA-binding transcriptional regulator;
seg,NULL; ssDNA-binding transcriptional regu,CUFF.22818.1
(260 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma08g40850.1 376 e-104
Glyma08g40850.4 306 2e-83
Glyma18g16200.1 305 4e-83
Glyma08g40850.3 254 7e-68
Glyma01g05000.1 248 3e-66
Glyma02g02390.1 229 3e-60
Glyma02g02390.2 224 6e-59
Glyma08g40850.2 206 3e-53
Glyma19g43880.1 152 4e-37
Glyma03g41270.1 149 4e-36
Glyma02g02440.2 118 5e-27
Glyma02g02440.1 67 2e-11
>Glyma08g40850.1
Length = 269
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/217 (82%), Positives = 199/217 (91%), Gaps = 3/217 (1%)
Query: 44 IRCRHSDLFDQKTFSSSTPQPANPAAVSVGALPPRVYVGHSIYKGKAALTVTPRPPEFAP 103
+RCRH+DLFDQ T +S TP+P P+A SVGALPPRVYVG+SIYKGKAALT+TPRPPEF P
Sbjct: 55 LRCRHTDLFDQNTIAS-TPRPTRPSA-SVGALPPRVYVGYSIYKGKAALTLTPRPPEFMP 112
Query: 104 LDSGAFKISREGYVLLQFAPAIASRQYDWNRKQVFSLSVVEMGSVISLGTRESCEFFHDP 163
LDSGA+KIS+EGYVLLQFAPA+ +RQYDWNRKQVFSLSV EMGSVISLG R+S E FHDP
Sbjct: 113 LDSGAYKISKEGYVLLQFAPAVGTRQYDWNRKQVFSLSVSEMGSVISLGARDSYELFHDP 172
Query: 164 LKGKSDEGKVRKVLKLEPLPDGSGHFFNLSVQNKIVNIDENIYIPVTKAELAVLSSIFNF 223
KGKSDEGKVRK+LK+EPLPDGSGHFFNLSVQN +VN+DE+IYIPVTKAELAVL+S FNF
Sbjct: 173 FKGKSDEGKVRKILKVEPLPDGSGHFFNLSVQNNLVNVDESIYIPVTKAELAVLTSTFNF 232
Query: 224 IMPYLLGWHTFANSVNPEYSSGVNNANPRYGGDYEWN 260
IMPYLLGWHTFANS+ PE +GVNNANPRYGGDYEWN
Sbjct: 233 IMPYLLGWHTFANSIKPE-DNGVNNANPRYGGDYEWN 268
>Glyma08g40850.4
Length = 232
Score = 306 bits (783), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 164/179 (91%), Gaps = 2/179 (1%)
Query: 44 IRCRHSDLFDQKTFSSSTPQPANPAAVSVGALPPRVYVGHSIYKGKAALTVTPRPPEFAP 103
+RCRH+DLFDQ T +S TP+P P+A SVGALPPRVYVG+SIYKGKAALT+TPRPPEF P
Sbjct: 55 LRCRHTDLFDQNTIAS-TPRPTRPSA-SVGALPPRVYVGYSIYKGKAALTLTPRPPEFMP 112
Query: 104 LDSGAFKISREGYVLLQFAPAIASRQYDWNRKQVFSLSVVEMGSVISLGTRESCEFFHDP 163
LDSGA+KIS+EGYVLLQFAPA+ +RQYDWNRKQVFSLSV EMGSVISLG R+S E FHDP
Sbjct: 113 LDSGAYKISKEGYVLLQFAPAVGTRQYDWNRKQVFSLSVSEMGSVISLGARDSYELFHDP 172
Query: 164 LKGKSDEGKVRKVLKLEPLPDGSGHFFNLSVQNKIVNIDENIYIPVTKAELAVLSSIFN 222
KGKSDEGKVRK+LK+EPLPDGSGHFFNLSVQN +VN+DE+IYIPVTKAELAVL+S FN
Sbjct: 173 FKGKSDEGKVRKILKVEPLPDGSGHFFNLSVQNNLVNVDESIYIPVTKAELAVLTSTFN 231
>Glyma18g16200.1
Length = 229
Score = 305 bits (780), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 149/184 (80%), Positives = 167/184 (90%), Gaps = 3/184 (1%)
Query: 39 KPLTLIRCRHSDLFDQKTFSSSTPQPANPAAVSVGALPPRVYVGHSIYKGKAALTVTPRP 98
KP +L RCRHSDLFDQ T +S TP+P P+A S GALPPRVYVG+SIYKGKAALT+TPRP
Sbjct: 48 KPFSL-RCRHSDLFDQNTLAS-TPRPTRPSA-SGGALPPRVYVGYSIYKGKAALTLTPRP 104
Query: 99 PEFAPLDSGAFKISREGYVLLQFAPAIASRQYDWNRKQVFSLSVVEMGSVISLGTRESCE 158
PEF PLD+GA+KIS+EGYVLLQFAPA+ +RQYDWNRKQVFSLSV EMGSVISLG R+S E
Sbjct: 105 PEFMPLDAGAYKISKEGYVLLQFAPAVGTRQYDWNRKQVFSLSVGEMGSVISLGARDSYE 164
Query: 159 FFHDPLKGKSDEGKVRKVLKLEPLPDGSGHFFNLSVQNKIVNIDENIYIPVTKAELAVLS 218
FFHDP KGK DEGKVRK+LK+EPLPDGSGHFFNLSVQNK+VN+DE+IYIPVTKAELAVL+
Sbjct: 165 FFHDPFKGKRDEGKVRKILKVEPLPDGSGHFFNLSVQNKLVNVDESIYIPVTKAELAVLT 224
Query: 219 SIFN 222
S FN
Sbjct: 225 STFN 228
>Glyma08g40850.3
Length = 220
Score = 254 bits (649), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 122/149 (81%), Positives = 136/149 (91%), Gaps = 2/149 (1%)
Query: 44 IRCRHSDLFDQKTFSSSTPQPANPAAVSVGALPPRVYVGHSIYKGKAALTVTPRPPEFAP 103
+RCRH+DLFDQ T +S TP+P P+A SVGALPPRVYVG+SIYKGKAALT+TPRPPEF P
Sbjct: 55 LRCRHTDLFDQNTIAS-TPRPTRPSA-SVGALPPRVYVGYSIYKGKAALTLTPRPPEFMP 112
Query: 104 LDSGAFKISREGYVLLQFAPAIASRQYDWNRKQVFSLSVVEMGSVISLGTRESCEFFHDP 163
LDSGA+KIS+EGYVLLQFAPA+ +RQYDWNRKQVFSLSV EMGSVISLG R+S E FHDP
Sbjct: 113 LDSGAYKISKEGYVLLQFAPAVGTRQYDWNRKQVFSLSVSEMGSVISLGARDSYELFHDP 172
Query: 164 LKGKSDEGKVRKVLKLEPLPDGSGHFFNL 192
KGKSDEGKVRK+LK+EPLPDGSGHFFNL
Sbjct: 173 FKGKSDEGKVRKILKVEPLPDGSGHFFNL 201
>Glyma01g05000.1
Length = 263
Score = 248 bits (634), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 127/223 (56%), Positives = 158/223 (70%), Gaps = 12/223 (5%)
Query: 44 IRCRHSDLFDQKTFSSSTPQPANPAAVSVGALPP-RVYVGHSIYKGKAALTVTPRPPEFA 102
+RC H +L K F V LP RVYVG+S+Y K LTVTPRPPEF
Sbjct: 46 VRCYHPNLVQPKPFPPLP------QRPPVAELPQQRVYVGYSVYTRKGVLTVTPRPPEFE 99
Query: 103 PLDSGAFKISREGYVLLQFAPAIASRQ--YDWNRKQVFSLSVVEMGSVISLGTRESCEFF 160
SGAFK+S+EGYV+LQFAP++ + + YDWN+KQ+FSLSV EMG++I+LG R+S EF
Sbjct: 100 SKSSGAFKVSKEGYVVLQFAPSVGADEPIYDWNQKQIFSLSVSEMGTLITLGARDSWEFS 159
Query: 161 HDPLKGKSDEGKVRKVLKLEPLPDGSGHFFNLSVQNKIVN---IDENIYIPVTKAELAVL 217
H+ +K KS+E +VRKVLK+EPL D +GH F+LSVQ K VN I +NI +PVT+AELAVL
Sbjct: 160 HETVKLKSNETEVRKVLKVEPLLDATGHLFSLSVQKKPVNMEGIQKNISLPVTRAELAVL 219
Query: 218 SSIFNFIMPYLLGWHTFANSVNPEYSSGVNNANPRYGGDYEWN 260
+FN+IMPYLLGW+ F NS+ PE S VNN N RYG D EWN
Sbjct: 220 RVLFNYIMPYLLGWNAFGNSIKPEVYSQVNNTNSRYGADNEWN 262
>Glyma02g02390.1
Length = 263
Score = 229 bits (583), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 118/223 (52%), Positives = 150/223 (67%), Gaps = 12/223 (5%)
Query: 44 IRCRHSDLFDQKTFSSSTPQPANPAAVSVGALPP-RVYVGHSIYKGKAALTVTPRPPEFA 102
++C H +L K F LP RVYVG+S+Y K LTV PRPPEF
Sbjct: 46 VKCYHPNLVQPKPFPPLP------QRPPFAELPQQRVYVGYSVYTKKGMLTVIPRPPEFE 99
Query: 103 PLDSGAFKISREGYVLLQFAPAIASRQ--YDWNRKQVFSLSVVEMGSVISLGTRESCEFF 160
SGAFK+S+EGYV+LQFAP++ + + YDWN KQ FSLSV EMG++I LG R+S EF
Sbjct: 100 SKSSGAFKVSKEGYVVLQFAPSVGADEPIYDWNHKQTFSLSVSEMGTLIILGARDSWEFS 159
Query: 161 HDPLKGKSDEGKVRKVLKLEPLPDGSGHFFNLSVQNKIVN---IDENIYIPVTKAELAVL 217
H+ +K KS + VRKVLK+EPL D +GH F+L V K N I ++I++PVT+A+L VL
Sbjct: 160 HETVKLKSSKIDVRKVLKVEPLLDATGHLFSLRVLKKPANMEGIQKSIFLPVTRADLEVL 219
Query: 218 SSIFNFIMPYLLGWHTFANSVNPEYSSGVNNANPRYGGDYEWN 260
S+FN+IMPYLLGW+ F NS+ PE S VN+ NPRYG D EWN
Sbjct: 220 RSLFNYIMPYLLGWNAFGNSIKPEVYSQVNSTNPRYGADNEWN 262
>Glyma02g02390.2
Length = 262
Score = 224 bits (571), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 118/223 (52%), Positives = 150/223 (67%), Gaps = 13/223 (5%)
Query: 44 IRCRHSDLFDQKTFSSSTPQPANPAAVSVGALPP-RVYVGHSIYKGKAALTVTPRPPEFA 102
++C H +L K F LP RVYVG+S+Y K LTV PRPPEF
Sbjct: 46 VKCYHPNLVQPKPFPPLP------QRPPFAELPQQRVYVGYSVYTKKGMLTVIPRPPEFE 99
Query: 103 PLDSGAFKISREGYVLLQFAPAIASRQ--YDWNRKQVFSLSVVEMGSVISLGTRESCEFF 160
SGAFK+S+EGYV+LQFAP++ + + YDWN KQ FSLSV EMG++I LG R+S EF
Sbjct: 100 SKSSGAFKVSKEGYVVLQFAPSVGADEPIYDWNHKQTFSLSVSEMGTLIILGARDSWEFS 159
Query: 161 HDPLKGKSDEGKVRKVLKLEPLPDGSGHFFNLSVQNKIVN---IDENIYIPVTKAELAVL 217
H+ +K KS + VRKVLK+EPL D +GH F+L V K N I ++I++PVT+A+L VL
Sbjct: 160 HETVKLKS-KIDVRKVLKVEPLLDATGHLFSLRVLKKPANMEGIQKSIFLPVTRADLEVL 218
Query: 218 SSIFNFIMPYLLGWHTFANSVNPEYSSGVNNANPRYGGDYEWN 260
S+FN+IMPYLLGW+ F NS+ PE S VN+ NPRYG D EWN
Sbjct: 219 RSLFNYIMPYLLGWNAFGNSIKPEVYSQVNSTNPRYGADNEWN 261
>Glyma08g40850.2
Length = 186
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 99/124 (79%), Positives = 111/124 (89%), Gaps = 2/124 (1%)
Query: 44 IRCRHSDLFDQKTFSSSTPQPANPAAVSVGALPPRVYVGHSIYKGKAALTVTPRPPEFAP 103
+RCRH+DLFDQ T +S TP+P P+A SVGALPPRVYVG+SIYKGKAALT+TPRPPEF P
Sbjct: 55 LRCRHTDLFDQNTIAS-TPRPTRPSA-SVGALPPRVYVGYSIYKGKAALTLTPRPPEFMP 112
Query: 104 LDSGAFKISREGYVLLQFAPAIASRQYDWNRKQVFSLSVVEMGSVISLGTRESCEFFHDP 163
LDSGA+KIS+EGYVLLQFAPA+ +RQYDWNRKQVFSLSV EMGSVISLG R+S E FHDP
Sbjct: 113 LDSGAYKISKEGYVLLQFAPAVGTRQYDWNRKQVFSLSVSEMGSVISLGARDSYELFHDP 172
Query: 164 LKGK 167
KGK
Sbjct: 173 FKGK 176
>Glyma19g43880.1
Length = 235
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 131/224 (58%), Gaps = 10/224 (4%)
Query: 39 KPLTLIRCRHSDLFDQKTFSSSTPQPANPAAVSVGALPPRVYVGHSIYKGKAALTVTPRP 98
+ L ++ R ++ D+ + S+ N A G R++ +++YKGKAA ++ P
Sbjct: 17 RLLEVLSSRKVEVGDRLSHSAGISTATNNYAAK-GYASDRIFAPYTVYKGKAAFSLIPCL 75
Query: 99 PEFAPLDSGAFKISREGYVLLQFAPAIASRQYDWNRKQVFSLSVVEMGSVISLGTRESCE 158
P F L+SG + R G +++ F +I R+YDW ++Q F+LS E+GS+I++G ++SC+
Sbjct: 76 PTFTKLNSGTVVVDRRGSIMMTFMHSIGERKYDWEKRQRFALSATEVGSLITMGAQDSCD 135
Query: 159 FFHDPLKGKSDEGKVRKVLKLEPLPDGSGHFFNLSVQNKIVNIDENIYIPVTKAELAVLS 218
FFHDP S+ G+VRK L ++ P +G+F +L+V N ++N ++ +PVT AE AV+
Sbjct: 136 FFHDPSMLSSNAGQVRKSLSIK--PHANGYFVSLTVVNNLLNTNDYFSVPVTTAEFAVMK 193
Query: 219 SIFNFIMPYLLGWHTFANSVNPEYSSGVNNANPRYG---GDYEW 259
+ +F +P+++GW N + S G+++ + D EW
Sbjct: 194 TACSFALPHIMGWDQITN----QQSRGIDDLQVKGDSKVSDLEW 233
>Glyma03g41270.1
Length = 242
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 112/181 (61%), Gaps = 3/181 (1%)
Query: 56 TFSSSTPQPANPAAVSVGALPPRVYVGHSIYKGKAALTVTPRPPEFAPLDSGAFKISREG 115
T+S++ N A G R++ +++YKGKAA ++ P P F LDSG + R G
Sbjct: 41 TYSAAISTATNNYAAK-GHASDRIFAPYTVYKGKAAFSLIPCLPTFTKLDSGTVVVDRRG 99
Query: 116 YVLLQFAPAIASRQYDWNRKQVFSLSVVEMGSVISLGTRESCEFFHDPLKGKSDEGKVRK 175
+++ F +I R+YDW+++Q F+LS E+GS+I++ ++SC+FFHDP S+ G+VRK
Sbjct: 100 SIMMSFMHSIGERKYDWDKRQKFALSATEVGSLITMDAQDSCDFFHDPSMLSSNAGQVRK 159
Query: 176 VLKLEPLPDGSGHFFNLSVQNKIVNIDENIYIPVTKAELAVLSSIFNFIMPYLLGWHTFA 235
L ++ P +G+F +L+V N ++N + +PVT AE AV+ + F +P+++GW
Sbjct: 160 SLSIK--PHANGYFVSLTVVNNLLNTKDYFSVPVTTAEFAVMKTACTFALPHIMGWDQIT 217
Query: 236 N 236
N
Sbjct: 218 N 218
>Glyma02g02440.2
Length = 126
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/105 (58%), Positives = 77/105 (73%), Gaps = 7/105 (6%)
Query: 159 FFHDPLKGKSDEGKVRKVLKLEPLPDGSGHFFNLSVQNKIVN---IDENIYIPVTKAELA 215
FFH P+ ++E +VRKVLK+EPL D +GH F+LSV K N I E+I++PVT+A+L
Sbjct: 25 FFH-PM---TNEIEVRKVLKVEPLLDATGHLFSLSVLKKPANMEGIQESIFLPVTRADLE 80
Query: 216 VLSSIFNFIMPYLLGWHTFANSVNPEYSSGVNNANPRYGGDYEWN 260
VL S+FN IMPYLLGW+ F NS+ PE S VN+ NPRYG D EWN
Sbjct: 81 VLRSLFNCIMPYLLGWNAFGNSIKPEVYSQVNSTNPRYGADNEWN 125
>Glyma02g02440.1
Length = 148
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 47/88 (53%), Gaps = 28/88 (31%)
Query: 201 IDENIYIPVTKAELAVLS---------------SIFNF-------------IMPYLLGWH 232
I E+I++PVT+A+L VLS + +N IMPYLLGW+
Sbjct: 60 IQESIFLPVTRADLEVLSDSNFRKQPLCICKGKAAYNIPPPYLRIAKSLWCIMPYLLGWN 119
Query: 233 TFANSVNPEYSSGVNNANPRYGGDYEWN 260
F NS+ PE S VN+ NPRYG D EWN
Sbjct: 120 AFGNSIKPEVYSQVNSTNPRYGADNEWN 147