Miyakogusa Predicted Gene

Lj0g3v0333099.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0333099.1 Non Chatacterized Hit- tr|I3T6H9|I3T6H9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,The
RING-variant domain is a C4HC3 zinc-fing,Zinc finger, RING-CH-type;
RING/U-box,NULL; seg,NULL; n,CUFF.22846.1
         (154 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g08220.2                                                       250   3e-67
Glyma05g08220.1                                                       250   3e-67
Glyma17g12750.4                                                       248   1e-66
Glyma17g12750.3                                                       248   1e-66
Glyma17g12750.2                                                       248   1e-66
Glyma17g12750.1                                                       248   1e-66
Glyma18g02420.1                                                       137   4e-33
Glyma11g36020.1                                                       136   8e-33
Glyma05g31600.1                                                       130   6e-31
Glyma15g00320.2                                                       118   2e-27
Glyma15g00320.1                                                       118   2e-27
Glyma13g45010.1                                                       118   2e-27
Glyma15g00320.3                                                       112   2e-25
Glyma08g14820.1                                                        64   7e-11
Glyma07g33840.2                                                        50   1e-06
Glyma07g33840.1                                                        50   1e-06

>Glyma05g08220.2 
          Length = 309

 Score =  250 bits (639), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 126/156 (80%), Positives = 131/156 (83%), Gaps = 2/156 (1%)

Query: 1   MKGEVQLQPPPIMQNXXXXXXXXXXXXXXXXX-XXXAEIKDEE-DVEAGSLPCCRICLES 58
           MKGEVQLQPP +MQN                      EIK+EE DVEAG LPCCRICLES
Sbjct: 1   MKGEVQLQPPAVMQNPSDSDPLLHNQEEEDGSPGSSGEIKNEEEDVEAGLLPCCRICLES 60

Query: 59  DSDPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVESYEDNSW 118
           DSDPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVES+EDNSW
Sbjct: 61  DSDPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVESFEDNSW 120

Query: 119 RKIKFRLFVARDVFLVFVAVQTVIAAIGGFAYIMDK 154
           RKIKFRLFVARDVFLVF+AVQTVIAAIGGF+YIMDK
Sbjct: 121 RKIKFRLFVARDVFLVFLAVQTVIAAIGGFSYIMDK 156


>Glyma05g08220.1 
          Length = 309

 Score =  250 bits (639), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 126/156 (80%), Positives = 131/156 (83%), Gaps = 2/156 (1%)

Query: 1   MKGEVQLQPPPIMQNXXXXXXXXXXXXXXXXX-XXXAEIKDEE-DVEAGSLPCCRICLES 58
           MKGEVQLQPP +MQN                      EIK+EE DVEAG LPCCRICLES
Sbjct: 1   MKGEVQLQPPAVMQNPSDSDPLLHNQEEEDGSPGSSGEIKNEEEDVEAGLLPCCRICLES 60

Query: 59  DSDPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVESYEDNSW 118
           DSDPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVES+EDNSW
Sbjct: 61  DSDPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVESFEDNSW 120

Query: 119 RKIKFRLFVARDVFLVFVAVQTVIAAIGGFAYIMDK 154
           RKIKFRLFVARDVFLVF+AVQTVIAAIGGF+YIMDK
Sbjct: 121 RKIKFRLFVARDVFLVFLAVQTVIAAIGGFSYIMDK 156


>Glyma17g12750.4 
          Length = 311

 Score =  248 bits (634), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 126/158 (79%), Positives = 130/158 (82%), Gaps = 4/158 (2%)

Query: 1   MKGEVQLQPPPIMQNXXXX---XXXXXXXXXXXXXXXXAEIKDEE-DVEAGSLPCCRICL 56
           MKGEVQLQPP +MQN                        EIK+EE DVEAG LPCCRICL
Sbjct: 1   MKGEVQLQPPAVMQNPSDSDPLLHNQEEEEEDESPGSSGEIKNEEEDVEAGLLPCCRICL 60

Query: 57  ESDSDPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVESYEDN 116
           ESDSDPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVES EDN
Sbjct: 61  ESDSDPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVESIEDN 120

Query: 117 SWRKIKFRLFVARDVFLVFVAVQTVIAAIGGFAYIMDK 154
           +WRKIKFRLFVARDVFLVF+AVQTVIAAIGGFAYIMDK
Sbjct: 121 TWRKIKFRLFVARDVFLVFLAVQTVIAAIGGFAYIMDK 158


>Glyma17g12750.3 
          Length = 311

 Score =  248 bits (634), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 126/158 (79%), Positives = 130/158 (82%), Gaps = 4/158 (2%)

Query: 1   MKGEVQLQPPPIMQNXXXX---XXXXXXXXXXXXXXXXAEIKDEE-DVEAGSLPCCRICL 56
           MKGEVQLQPP +MQN                        EIK+EE DVEAG LPCCRICL
Sbjct: 1   MKGEVQLQPPAVMQNPSDSDPLLHNQEEEEEDESPGSSGEIKNEEEDVEAGLLPCCRICL 60

Query: 57  ESDSDPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVESYEDN 116
           ESDSDPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVES EDN
Sbjct: 61  ESDSDPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVESIEDN 120

Query: 117 SWRKIKFRLFVARDVFLVFVAVQTVIAAIGGFAYIMDK 154
           +WRKIKFRLFVARDVFLVF+AVQTVIAAIGGFAYIMDK
Sbjct: 121 TWRKIKFRLFVARDVFLVFLAVQTVIAAIGGFAYIMDK 158


>Glyma17g12750.2 
          Length = 311

 Score =  248 bits (634), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 126/158 (79%), Positives = 130/158 (82%), Gaps = 4/158 (2%)

Query: 1   MKGEVQLQPPPIMQNXXXX---XXXXXXXXXXXXXXXXAEIKDEE-DVEAGSLPCCRICL 56
           MKGEVQLQPP +MQN                        EIK+EE DVEAG LPCCRICL
Sbjct: 1   MKGEVQLQPPAVMQNPSDSDPLLHNQEEEEEDESPGSSGEIKNEEEDVEAGLLPCCRICL 60

Query: 57  ESDSDPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVESYEDN 116
           ESDSDPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVES EDN
Sbjct: 61  ESDSDPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVESIEDN 120

Query: 117 SWRKIKFRLFVARDVFLVFVAVQTVIAAIGGFAYIMDK 154
           +WRKIKFRLFVARDVFLVF+AVQTVIAAIGGFAYIMDK
Sbjct: 121 TWRKIKFRLFVARDVFLVFLAVQTVIAAIGGFAYIMDK 158


>Glyma17g12750.1 
          Length = 311

 Score =  248 bits (634), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 126/158 (79%), Positives = 130/158 (82%), Gaps = 4/158 (2%)

Query: 1   MKGEVQLQPPPIMQNXXXX---XXXXXXXXXXXXXXXXAEIKDEE-DVEAGSLPCCRICL 56
           MKGEVQLQPP +MQN                        EIK+EE DVEAG LPCCRICL
Sbjct: 1   MKGEVQLQPPAVMQNPSDSDPLLHNQEEEEEDESPGSSGEIKNEEEDVEAGLLPCCRICL 60

Query: 57  ESDSDPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVESYEDN 116
           ESDSDPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVES EDN
Sbjct: 61  ESDSDPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVESIEDN 120

Query: 117 SWRKIKFRLFVARDVFLVFVAVQTVIAAIGGFAYIMDK 154
           +WRKIKFRLFVARDVFLVF+AVQTVIAAIGGFAYIMDK
Sbjct: 121 TWRKIKFRLFVARDVFLVFLAVQTVIAAIGGFAYIMDK 158


>Glyma18g02420.1 
          Length = 323

 Score =  137 bits (345), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 64/118 (54%), Positives = 83/118 (70%), Gaps = 9/118 (7%)

Query: 40  DEEDVEAGSLPC----CRICLESDSDPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFA 95
            E D+EAG  P     CRICLE+D     + I+PC CKGT ++VHR CLDHWR++KEGFA
Sbjct: 20  SEIDLEAG--PSEQIQCRICLETDGR---DFIAPCKCKGTSKYVHRECLDHWRAIKEGFA 74

Query: 96  FSHCTTCKAQFHLRVESYEDNSWRKIKFRLFVARDVFLVFVAVQTVIAAIGGFAYIMD 153
           F+HCTTCKA +HLRV    D  WR +KFR FV RD+  +F++VQ VIA++    Y++D
Sbjct: 75  FAHCTTCKAPYHLRVHVAADRKWRTLKFRFFVTRDILFIFLSVQLVIASLAYLVYLID 132


>Glyma11g36020.1 
          Length = 323

 Score =  136 bits (343), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 64/118 (54%), Positives = 83/118 (70%), Gaps = 9/118 (7%)

Query: 40  DEEDVEAGSLPC----CRICLESDSDPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFA 95
            E D+EAG  P     CRICLE+D     + I+PC CKGT ++VHR CLDHWR++KEGFA
Sbjct: 20  SEIDLEAG--PSEQIQCRICLETDGR---DFIAPCKCKGTSKYVHRECLDHWRAIKEGFA 74

Query: 96  FSHCTTCKAQFHLRVESYEDNSWRKIKFRLFVARDVFLVFVAVQTVIAAIGGFAYIMD 153
           F+HCTTCKA +HLRV    D  WR +KFR FV RD+  +F++VQ VIA++    Y++D
Sbjct: 75  FAHCTTCKAPYHLRVHVAADRKWRTLKFRFFVTRDMLFIFLSVQLVIASLSYLVYLID 132


>Glyma05g31600.1 
          Length = 324

 Score =  130 bits (327), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 60/102 (58%), Positives = 72/102 (70%), Gaps = 4/102 (3%)

Query: 52  CRICLESDSDPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVE 111
           CRICLE+D       I PC CKGT ++VHR CLDHWR+VKEGFAF+HCTTCKA +HLRV 
Sbjct: 30  CRICLETDGR---NFIVPCKCKGTSKYVHRECLDHWRAVKEGFAFAHCTTCKAPYHLRVH 86

Query: 112 SYEDNSWRKIKFRLFVARDVFLVFVAVQTVIAAIGGFAYIMD 153
                 WR  KFR FV RD+ L+F+AVQ VIA++    Y +D
Sbjct: 87  G-AYRQWRTFKFRFFVTRDILLIFLAVQLVIASLAYLVYQID 127


>Glyma15g00320.2 
          Length = 257

 Score =  118 bits (296), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 55/101 (54%), Positives = 70/101 (69%), Gaps = 3/101 (2%)

Query: 50  PCCRICLESDSDPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLR 109
           P CRICL+   +   +LI+PC CKGTQ++VHRSCLD+WRS KEGFAFSHCT C+A F LR
Sbjct: 68  PQCRICLDIGGE---DLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFSHCTECRAVFILR 124

Query: 110 VESYEDNSWRKIKFRLFVARDVFLVFVAVQTVIAAIGGFAY 150
                D  W ++KF+  VARD   +F+ VQ V+A +G   Y
Sbjct: 125 ANVPPDRWWLRLKFQFLVARDHAFIFIIVQLVVAFLGVLVY 165


>Glyma15g00320.1 
          Length = 257

 Score =  118 bits (296), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 55/101 (54%), Positives = 70/101 (69%), Gaps = 3/101 (2%)

Query: 50  PCCRICLESDSDPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLR 109
           P CRICL+   +   +LI+PC CKGTQ++VHRSCLD+WRS KEGFAFSHCT C+A F LR
Sbjct: 68  PQCRICLDIGGE---DLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFSHCTECRAVFILR 124

Query: 110 VESYEDNSWRKIKFRLFVARDVFLVFVAVQTVIAAIGGFAY 150
                D  W ++KF+  VARD   +F+ VQ V+A +G   Y
Sbjct: 125 ANVPPDRWWLRLKFQFLVARDHAFIFIIVQLVVAFLGVLVY 165


>Glyma13g45010.1 
          Length = 259

 Score =  118 bits (296), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 55/101 (54%), Positives = 70/101 (69%), Gaps = 3/101 (2%)

Query: 50  PCCRICLESDSDPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLR 109
           P CRICL+   +   +LI+PC CKGTQ++VHRSCLD+WRS KEGFAFSHCT C+A F LR
Sbjct: 70  PQCRICLDIGGE---DLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFSHCTECRAVFILR 126

Query: 110 VESYEDNSWRKIKFRLFVARDVFLVFVAVQTVIAAIGGFAY 150
                D  W ++KF+  VARD   +F+ VQ V+A +G   Y
Sbjct: 127 ANVPPDRWWLRLKFQFLVARDHAFIFIIVQLVVAFLGVLVY 167


>Glyma15g00320.3 
          Length = 256

 Score =  112 bits (280), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 54/101 (53%), Positives = 69/101 (68%), Gaps = 4/101 (3%)

Query: 50  PCCRICLESDSDPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLR 109
           P CRICL+   +   +LI+PC CKGTQ++VHRSCLD+WRS K GFAFSHCT C+A F LR
Sbjct: 68  PQCRICLDIGGE---DLIAPCHCKGTQKYVHRSCLDNWRSTK-GFAFSHCTECRAVFILR 123

Query: 110 VESYEDNSWRKIKFRLFVARDVFLVFVAVQTVIAAIGGFAY 150
                D  W ++KF+  VARD   +F+ VQ V+A +G   Y
Sbjct: 124 ANVPPDRWWLRLKFQFLVARDHAFIFIIVQLVVAFLGVLVY 164


>Glyma08g14820.1 
          Length = 76

 Score = 63.5 bits (153), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 8/67 (11%)

Query: 90  VKEGFAFSHCTTCKAQFHLRVESYEDNSWRKIKFRLFVARDVFLVFVAVQTV-------I 142
           ++EGFAF+HCTTCKA +HL V S     WR  K R FV RD+  +F+ VQ V       +
Sbjct: 1   LQEGFAFAHCTTCKAPYHLSVHS-AYRQWRTFKLRFFVTRDILFIFLVVQHVDGYEQYWL 59

Query: 143 AAIGGFA 149
             +GGF 
Sbjct: 60  RLVGGFG 66


>Glyma07g33840.2 
          Length = 1123

 Score = 49.7 bits (117), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 5/76 (6%)

Query: 52  CRICLESDSDPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVE 111
           CRIC  +  D E+ L  PC C G+ +FVH+ CL  W +         C  CK  F     
Sbjct: 81  CRIC-RNPGDAENPLRYPCACSGSIKFVHQDCLLQWLNHSNA---RQCEVCKHAFSFS-P 135

Query: 112 SYEDNSWRKIKFRLFV 127
            Y +N+  ++ F+ FV
Sbjct: 136 VYAENAPARLPFQEFV 151


>Glyma07g33840.1 
          Length = 1124

 Score = 49.7 bits (117), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 5/76 (6%)

Query: 52  CRICLESDSDPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVE 111
           CRIC  +  D E+ L  PC C G+ +FVH+ CL  W +         C  CK  F     
Sbjct: 81  CRIC-RNPGDAENPLRYPCACSGSIKFVHQDCLLQWLNHSNA---RQCEVCKHAFSFS-P 135

Query: 112 SYEDNSWRKIKFRLFV 127
            Y +N+  ++ F+ FV
Sbjct: 136 VYAENAPARLPFQEFV 151