Miyakogusa Predicted Gene

Lj0g3v0332899.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0332899.1 Non Chatacterized Hit- tr|B9STZ0|B9STZ0_RICCO
Cell differentiation protein rcd1, putative
OS=Ricinus,85.27,0,Rcd1,Cell differentiation, Rcd1-like; SUBFAMILY NOT
NAMED,NULL; UNCHARACTERIZED,Cell differentiation,CUFF.22724.1
         (331 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g43220.1                                                       552   e-157
Glyma18g10400.1                                                       552   e-157
Glyma02g46250.1                                                       511   e-145
Glyma14g02480.1                                                       496   e-140
Glyma01g25770.1                                                        89   7e-18
Glyma03g26360.1                                                        69   6e-12
Glyma19g27620.1                                                        64   2e-10
Glyma06g24410.1                                                        55   7e-08

>Glyma08g43220.1 
          Length = 325

 Score =  552 bits (1423), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 270/285 (94%), Positives = 276/285 (96%), Gaps = 1/285 (0%)

Query: 47  KMAGAEQLVLELSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVL 106
           KMA AEQLVLELSNP+LRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVL
Sbjct: 40  KMASAEQLVLELSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVL 99

Query: 107 SPPTLTPAQSNRVCNALALLQCVASHPDTRMQFLNAHIPLYLYPFLNTTSKSRPFEYLRL 166
           SPP LTPAQSNRVCNALALLQCVASHPDTRM FLNAHIPLYLYPFLNTTSKSRPFEYLRL
Sbjct: 100 SPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRL 159

Query: 167 TSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLD 226
           TSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLD
Sbjct: 160 TSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLD 219

Query: 227 YICTTAERFFAVGRVLGNMVGALAEQQSTRLLKHIIRCYLRLSDNPRACDALRSCLPDML 286
           YICTTAERFFAVGRVLGNMV ALAEQ S+RLLKHIIRCYLRLSDNPRACDALRSCLPDML
Sbjct: 220 YICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDML 279

Query: 287 RDATFSSCLREDTTTRRWLQQLLHNVGSGRVPAMQA-GGFDHIMV 330
           RDATFS+CLRED TTRRWLQQLLHNVG  RVPA+QA GGFDH++V
Sbjct: 280 RDATFSTCLREDPTTRRWLQQLLHNVGGNRVPALQAGGGFDHMIV 324


>Glyma18g10400.1 
          Length = 325

 Score =  552 bits (1423), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 270/285 (94%), Positives = 276/285 (96%), Gaps = 1/285 (0%)

Query: 47  KMAGAEQLVLELSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVL 106
           KMA AEQLVLELSNP+LRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVL
Sbjct: 40  KMASAEQLVLELSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVL 99

Query: 107 SPPTLTPAQSNRVCNALALLQCVASHPDTRMQFLNAHIPLYLYPFLNTTSKSRPFEYLRL 166
           SPP LTPAQSNRVCNALALLQCVASHPDTRM FLNAHIPLYLYPFLNTTSKSRPFEYLRL
Sbjct: 100 SPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRL 159

Query: 167 TSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLD 226
           TSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLD
Sbjct: 160 TSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLD 219

Query: 227 YICTTAERFFAVGRVLGNMVGALAEQQSTRLLKHIIRCYLRLSDNPRACDALRSCLPDML 286
           YICTTAERFFAVGRVLGNMV ALAEQ S+RLLKHIIRCYLRLSDNPRACDALRSCLPDML
Sbjct: 220 YICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDML 279

Query: 287 RDATFSSCLREDTTTRRWLQQLLHNVGSGRVPAMQA-GGFDHIMV 330
           RDATFS+CLRED TTRRWLQQLLHNVG  RVPA+QA GGFDH++V
Sbjct: 280 RDATFSTCLREDPTTRRWLQQLLHNVGVNRVPALQAGGGFDHMIV 324


>Glyma02g46250.1 
          Length = 316

 Score =  511 bits (1317), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 251/314 (79%), Positives = 267/314 (85%), Gaps = 1/314 (0%)

Query: 17  MANLSQAFXXXXXXXXXXXXXXXXXXSSSNKMAGAEQLVLELSNPDLRENALLELSKKRE 76
           MANL Q+F                       MA  E LVL+LSNPDLRENAL ELSKKRE
Sbjct: 1   MANLPQSFSLSGASFGAPSSSSSATTKDPRTMASVENLVLQLSNPDLRENALHELSKKRE 60

Query: 77  LFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPTLTPAQSNRVCNALALLQCVASHPDTR 136
           LFQDLAPLLWNS GT+AALLQEIVSIYP +SPP LTPAQSNRVCNALALLQCVASH DTR
Sbjct: 61  LFQDLAPLLWNSLGTMAALLQEIVSIYPAISPPNLTPAQSNRVCNALALLQCVASHLDTR 120

Query: 137 MQFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLC 196
           M FLNAHIPLYLYPFLNTTSKSRPFEYLRLT+LGVIGALVKVDDTEVISFLLSTEIIPLC
Sbjct: 121 MPFLNAHIPLYLYPFLNTTSKSRPFEYLRLTTLGVIGALVKVDDTEVISFLLSTEIIPLC 180

Query: 197 LRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVGALAEQQSTR 256
           LR+MEMGSELSKTVATFIVQKILLD++GL YICTTAERF+AVGRVLGNMV  L +Q S R
Sbjct: 181 LRSMEMGSELSKTVATFIVQKILLDEMGLKYICTTAERFYAVGRVLGNMVATLVQQPSCR 240

Query: 257 LLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSSCLREDTTTRRWLQQLLHNVGSGR 316
           LLKHIIRCYLRLSDN  AC+ALR+CLPDMLRDATFSSCLRED T R+WLQQLLHN+G  R
Sbjct: 241 LLKHIIRCYLRLSDNQSACEALRACLPDMLRDATFSSCLREDPTARKWLQQLLHNIGVNR 300

Query: 317 VPAMQ-AGGFDHIM 329
           VPA+Q  GGFDH+M
Sbjct: 301 VPALQGGGGFDHMM 314


>Glyma14g02480.1 
          Length = 313

 Score =  496 bits (1276), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 238/285 (83%), Positives = 260/285 (91%), Gaps = 1/285 (0%)

Query: 46  NKMAGAEQLVLELSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPV 105
           +++A  E LVL+L+NPDLRENAL ELSKKRELFQDLAPLLWNSFGT++ALLQEIVSI+PV
Sbjct: 27  SRIASVEHLVLQLNNPDLRENALHELSKKRELFQDLAPLLWNSFGTMSALLQEIVSIFPV 86

Query: 106 LSPPTLTPAQSNRVCNALALLQCVASHPDTRMQFLNAHIPLYLYPFLNTTSKSRPFEYLR 165
           +SPP LTPAQS RVCNALAL QCVASH DTRMQFL+AHIPLYLYPFLNTTSKSRPFEYLR
Sbjct: 87  ISPPNLTPAQSTRVCNALALFQCVASHLDTRMQFLHAHIPLYLYPFLNTTSKSRPFEYLR 146

Query: 166 LTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGL 225
           LTSLGVIGALVKVDDT+VISFLLSTEIIPLCLR+MEMGSELSKTVATFIVQKILLD++GL
Sbjct: 147 LTSLGVIGALVKVDDTKVISFLLSTEIIPLCLRSMEMGSELSKTVATFIVQKILLDEIGL 206

Query: 226 DYICTTAERFFAVGRVLGNMVGALAEQQSTRLLKHIIRCYLRLSDNPRACDALRSCLPDM 285
            YICTTAERF+AV +VLGNMV  L EQ S+RLLKHIIRCYLRLSDN  AC ALR+CLPDM
Sbjct: 207 KYICTTAERFYAVAQVLGNMVETLVEQPSSRLLKHIIRCYLRLSDNQSACKALRTCLPDM 266

Query: 286 LRDATFSSCLREDTTTRRWLQQLLHNVGSGRVPAMQ-AGGFDHIM 329
           LRDATFS+CLRED T R WLQQLLHN+G  RVPA+Q  GGFD +M
Sbjct: 267 LRDATFSNCLREDPTARMWLQQLLHNIGDNRVPALQGGGGFDRMM 311


>Glyma01g25770.1 
          Length = 53

 Score = 89.0 bits (219), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 40/42 (95%), Positives = 42/42 (100%)

Query: 143 HIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVI 184
           HIPLYLYPFLNTTSKSRPFEYLRLT+LGVIGALVKVDDT+VI
Sbjct: 1   HIPLYLYPFLNTTSKSRPFEYLRLTTLGVIGALVKVDDTKVI 42


>Glyma03g26360.1 
          Length = 82

 Score = 69.3 bits (168), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 36/53 (67%), Positives = 40/53 (75%)

Query: 143 HIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPL 195
           HIP+YLYPFLNTT KSR FEYLRLT+LGVIGALVKV       F  S++ I L
Sbjct: 1   HIPIYLYPFLNTTRKSRLFEYLRLTTLGVIGALVKVQPPCTNKFTSSSQEILL 53


>Glyma19g27620.1 
          Length = 90

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/32 (87%), Positives = 31/32 (96%)

Query: 143 HIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGA 174
           HIPLYLYPFLNTTSKS+ FEYLRLT++GVIGA
Sbjct: 19  HIPLYLYPFLNTTSKSKLFEYLRLTTVGVIGA 50


>Glyma06g24410.1 
          Length = 84

 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 25/30 (83%), Positives = 27/30 (90%)

Query: 98  EIVSIYPVLSPPTLTPAQSNRVCNALALLQ 127
           EIVSI+PV+SPP LTPAQS RVCNALAL Q
Sbjct: 1   EIVSIFPVISPPNLTPAQSTRVCNALALFQ 30