Miyakogusa Predicted Gene

Lj0g3v0332319.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0332319.1 Non Chatacterized Hit- tr|D8R1T4|D8R1T4_SELML
Putative uncharacterized protein OS=Selaginella moelle,49.02,3e-17,
,CUFF.22653.1
         (101 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g10630.1                                                       178   1e-45
Glyma09g41950.1                                                       150   4e-37

>Glyma11g10630.1 
          Length = 393

 Score =  178 bits (452), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 82/99 (82%), Positives = 91/99 (91%)

Query: 1   MLPNVMVCPYDFPLTENNMRVYIPNILYGNAEVNVKSFSRFWFKNGVSRNSESKVPTLNT 60
           MLPNVM+CPYDFPLTENNMRVYIPNIL+GNAEVN+K    FWFK+GVSRNS+S V TL T
Sbjct: 286 MLPNVMICPYDFPLTENNMRVYIPNILFGNAEVNIKRLGSFWFKSGVSRNSQSDVLTLKT 345

Query: 61  VVLVATRALQDEELLLNYRLSNSKRRPEWYAPLDEEEDM 99
           VVLVATR+LQDEELLLNYRLSNSK+ PEWYAP+DEEED+
Sbjct: 346 VVLVATRSLQDEELLLNYRLSNSKKWPEWYAPVDEEEDI 384


>Glyma09g41950.1 
          Length = 445

 Score =  150 bits (378), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 70/97 (72%), Positives = 82/97 (84%), Gaps = 1/97 (1%)

Query: 3   PNVMVCPYDFPLTENNMRVYIPNILYGNAEVNVKSFSRFWFKNGVSRNSESK-VPTLNTV 61
           PNVM+CPYDFPLTE+NMRVYIPN+L+GNAEVN++ F  FWFK+G    +    VPTL T+
Sbjct: 344 PNVMICPYDFPLTESNMRVYIPNVLFGNAEVNMRRFGSFWFKSGGGSRNSGSNVPTLKTL 403

Query: 62  VLVATRALQDEELLLNYRLSNSKRRPEWYAPLDEEED 98
           VL+ATR LQDEEL LNYRLSN+KRRPEWY P+DEEED
Sbjct: 404 VLIATRPLQDEELFLNYRLSNTKRRPEWYNPVDEEED 440