Miyakogusa Predicted Gene

Lj0g3v0330219.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0330219.1 tr|Q70I39|Q70I39_LOTJA Coatomer alpha
subunit-like protein OS=Lotus japonicus PE=4
SV=1,88.89,0,COATOMER,NULL; coiled-coil,NULL; COPI_C,Coatomer, alpha
subunit, C-terminal,NODE_21365_length_635_cov_453.757477.path1.1
         (117 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g04290.2                                                       229   5e-61
Glyma12g04290.1                                                       229   5e-61
Glyma11g12080.1                                                       226   4e-60
Glyma04g43440.1                                                       223   5e-59
Glyma20g33270.1                                                       209   6e-55
Glyma10g34310.1                                                       206   4e-54

>Glyma12g04290.2 
          Length = 1221

 Score =  229 bits (584), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 100/117 (85%), Positives = 112/117 (95%)

Query: 1    MTVCFRSKNLASAANFARRLLETSPTIENQAKQARQVLAAAERNMTDATELNYDFRNPFV 60
            MTVC+++KNLA+AANFARRLLET+PT+ENQAK ARQVLAAAE+NMTDA +LNYDFRNPFV
Sbjct: 1105 MTVCYKAKNLATAANFARRLLETNPTVENQAKTARQVLAAAEKNMTDALQLNYDFRNPFV 1164

Query: 61   ICGATYVPIYRGQKDVSCPYCTSRFVPSQEAQLCTVCDLAVVGADASGLLCSPSQKR 117
            ICGATYVPIYRGQKD+SCPYCTSRFVPSQE QLC VC+L+VVGADASGLLCSP+Q R
Sbjct: 1165 ICGATYVPIYRGQKDISCPYCTSRFVPSQEGQLCAVCELSVVGADASGLLCSPAQIR 1221


>Glyma12g04290.1 
          Length = 1221

 Score =  229 bits (584), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 100/117 (85%), Positives = 112/117 (95%)

Query: 1    MTVCFRSKNLASAANFARRLLETSPTIENQAKQARQVLAAAERNMTDATELNYDFRNPFV 60
            MTVC+++KNLA+AANFARRLLET+PT+ENQAK ARQVLAAAE+NMTDA +LNYDFRNPFV
Sbjct: 1105 MTVCYKAKNLATAANFARRLLETNPTVENQAKTARQVLAAAEKNMTDALQLNYDFRNPFV 1164

Query: 61   ICGATYVPIYRGQKDVSCPYCTSRFVPSQEAQLCTVCDLAVVGADASGLLCSPSQKR 117
            ICGATYVPIYRGQKD+SCPYCTSRFVPSQE QLC VC+L+VVGADASGLLCSP+Q R
Sbjct: 1165 ICGATYVPIYRGQKDISCPYCTSRFVPSQEGQLCAVCELSVVGADASGLLCSPAQIR 1221


>Glyma11g12080.1 
          Length = 1221

 Score =  226 bits (576), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 99/117 (84%), Positives = 111/117 (94%)

Query: 1    MTVCFRSKNLASAANFARRLLETSPTIENQAKQARQVLAAAERNMTDATELNYDFRNPFV 60
            MTVC+++KNL++AANFARRLLET+PT+ENQAK ARQVLAAAE+NMTDA +LNYDFRNPFV
Sbjct: 1105 MTVCYKAKNLSTAANFARRLLETNPTVENQAKTARQVLAAAEKNMTDALQLNYDFRNPFV 1164

Query: 61   ICGATYVPIYRGQKDVSCPYCTSRFVPSQEAQLCTVCDLAVVGADASGLLCSPSQKR 117
            ICGATYVPIYRGQKDV+CPYCTSRFVPSQ  QLC VC+L+VVGADASGLLCSPSQ R
Sbjct: 1165 ICGATYVPIYRGQKDVACPYCTSRFVPSQAGQLCAVCELSVVGADASGLLCSPSQIR 1221


>Glyma04g43440.1 
          Length = 969

 Score =  223 bits (567), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 104/117 (88%), Positives = 109/117 (93%)

Query: 1   MTVCFRSKNLASAANFARRLLETSPTIENQAKQARQVLAAAERNMTDATELNYDFRNPFV 60
           MTVCF++KNLASAANFARRLLET+PT+E QAK AR+VLAAAE NMTDA  LNYDFRNPFV
Sbjct: 853 MTVCFKAKNLASAANFARRLLETNPTVETQAKTARKVLAAAETNMTDAKPLNYDFRNPFV 912

Query: 61  ICGATYVPIYRGQKDVSCPYCTSRFVPSQEAQLCTVCDLAVVGADASGLLCSPSQKR 117
            CGATYVPIYRGQKDVSCPYCTSRFVPSQE QLCTVCDLAVVGADASGLLCSPSQ R
Sbjct: 913 TCGATYVPIYRGQKDVSCPYCTSRFVPSQEGQLCTVCDLAVVGADASGLLCSPSQIR 969


>Glyma20g33270.1 
          Length = 1218

 Score =  209 bits (531), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 101/117 (86%), Positives = 112/117 (95%)

Query: 1    MTVCFRSKNLASAANFARRLLETSPTIENQAKQARQVLAAAERNMTDATELNYDFRNPFV 60
            MTVCFR+KNLA+AANFARRLLET+PT ENQA+ ARQV+AAAE+NMTDAT+LNYDFRNPFV
Sbjct: 1102 MTVCFRAKNLATAANFARRLLETNPTNENQARAARQVVAAAEKNMTDATQLNYDFRNPFV 1161

Query: 61   ICGATYVPIYRGQKDVSCPYCTSRFVPSQEAQLCTVCDLAVVGADASGLLCSPSQKR 117
            ICGATY+PIYRGQKDVSCPYC+SRFVP+QE QLC VCDLAV+GADASGLLCSPSQ R
Sbjct: 1162 ICGATYMPIYRGQKDVSCPYCSSRFVPTQEGQLCNVCDLAVIGADASGLLCSPSQIR 1218


>Glyma10g34310.1 
          Length = 1218

 Score =  206 bits (524), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 100/117 (85%), Positives = 111/117 (94%)

Query: 1    MTVCFRSKNLASAANFARRLLETSPTIENQAKQARQVLAAAERNMTDATELNYDFRNPFV 60
            MTVCF++KNLA+AANFARRLLET+PT ENQA+ ARQV+AAAE+ MTDAT+LNYDFRNPFV
Sbjct: 1102 MTVCFKAKNLATAANFARRLLETNPTNENQARAARQVVAAAEKTMTDATQLNYDFRNPFV 1161

Query: 61   ICGATYVPIYRGQKDVSCPYCTSRFVPSQEAQLCTVCDLAVVGADASGLLCSPSQKR 117
            ICGATYVPIYRGQKDVSCPYC+SRFVPSQE QLC VCDLAV+GADASGL+CSPSQ R
Sbjct: 1162 ICGATYVPIYRGQKDVSCPYCSSRFVPSQEGQLCNVCDLAVIGADASGLVCSPSQIR 1218