Miyakogusa Predicted Gene

Lj0g3v0330149.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0330149.1 tr|O24327|O24327_RICCO Orf protein OS=Ricinus
communis GN=orf PE=2 SV=1,84.62,1e-18,MBF1,Multiprotein bridging
factor 1, N-terminal; ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1
(MULTI,CUFF.22493.1
         (65 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g42900.1                                                       106   5e-24
Glyma12g15420.1                                                       106   5e-24
Glyma06g42890.1                                                       105   2e-23

>Glyma06g42900.1 
          Length = 142

 Score =  106 bits (265), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 61/65 (93%), Positives = 64/65 (98%)

Query: 1  MSGVGPLSQDWEPVVLRKKAPTAAAKKDEKAVNAARRSGADIETVKKFNAGTNKAASSST 60
          MSGVGPLSQDWEPVVLRKKAPTAAAKKDEKAVNAARRSGA+IET+KK+NAGTNKAASSST
Sbjct: 1  MSGVGPLSQDWEPVVLRKKAPTAAAKKDEKAVNAARRSGAEIETLKKYNAGTNKAASSST 60

Query: 61 SFNTK 65
          S NTK
Sbjct: 61 SLNTK 65


>Glyma12g15420.1 
          Length = 142

 Score =  106 bits (265), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 61/65 (93%), Positives = 64/65 (98%)

Query: 1  MSGVGPLSQDWEPVVLRKKAPTAAAKKDEKAVNAARRSGADIETVKKFNAGTNKAASSST 60
          MSGVGPLSQDWEPVVLRKKAPTAAAKKDEKAVNAARRSGA+IET+KK+NAGTNKAASSST
Sbjct: 1  MSGVGPLSQDWEPVVLRKKAPTAAAKKDEKAVNAARRSGAEIETLKKYNAGTNKAASSST 60

Query: 61 SFNTK 65
          S NTK
Sbjct: 61 SLNTK 65


>Glyma06g42890.1 
          Length = 142

 Score =  105 bits (261), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/65 (92%), Positives = 63/65 (96%)

Query: 1  MSGVGPLSQDWEPVVLRKKAPTAAAKKDEKAVNAARRSGADIETVKKFNAGTNKAASSST 60
          MSGVGPLSQDWEPVVLRKKAPTAAAKKDEKAVNAARRSGA+IET+KK+NAGTNKAASS T
Sbjct: 1  MSGVGPLSQDWEPVVLRKKAPTAAAKKDEKAVNAARRSGAEIETLKKYNAGTNKAASSGT 60

Query: 61 SFNTK 65
          S NTK
Sbjct: 61 SLNTK 65