Miyakogusa Predicted Gene
- Lj0g3v0329839.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0329839.1 Non Chatacterized Hit- tr|I3S3B9|I3S3B9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.9,0,rplV_bact:
ribosomal protein L22,Ribosomal protein L22,
bacterial/chloroplast-type; seg,NULL; CHLORO,CUFF.22462.1
(273 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma18g46170.1 349 1e-96
Glyma09g40030.1 285 5e-77
Glyma11g36270.1 89 6e-18
Glyma03g01340.1 72 4e-13
Glyma08g48360.1 68 9e-12
Glyma13g16660.1 68 1e-11
Glyma06g48460.1 67 1e-11
Glyma06g48390.1 67 2e-11
Glyma08g48330.1 65 5e-11
Glyma05g09270.1 59 5e-09
Glyma19g00820.1 59 7e-09
>Glyma18g46170.1
Length = 277
Score = 349 bits (896), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 188/277 (67%), Positives = 215/277 (77%), Gaps = 4/277 (1%)
Query: 1 MVQWQRHIFPILRHIHKGV--DHVYHSAPKLSISHLSSSFPQGQF-QGAWTTTS-PSISR 56
MVQW RH+FP LRHIHK V HSAP L IS L+SS QGQ + WTTT+ P SR
Sbjct: 1 MVQWHRHVFPFLRHIHKRVLEPQATHSAPSLVISRLASSLSQGQLGRRTWTTTTLPCFSR 60
Query: 57 PMYHCFQHQGISSSTWLLANSPEETXXXXXXXXXXXXXXXKGEDQNQKAVSKPENVQAVL 116
P++ FQHQGISSS LLANS EET KGEDQ QK V+KPE VQA+L
Sbjct: 61 PVFLTFQHQGISSSAQLLANSSEETPVLSPLAPVSLLSSSKGEDQKQKVVTKPEKVQAIL 120
Query: 117 KGIKQSPKKVNLVAALVRGMLVKDALLQLQLTVKRAAKTVYQVIHSARANASHNHGLDSD 176
K IKQSPKKVNLVAALVRGMLVKDAL+QL+LT+KRAAKTVYQVIHSARANASHNHGLD +
Sbjct: 121 KAIKQSPKKVNLVAALVRGMLVKDALMQLELTIKRAAKTVYQVIHSARANASHNHGLDPE 180
Query: 177 RLIIAEAYVGKGFYKKRISIHGKCRHGIMHRPECRLTVVVREITPEEEAKIARLKVHNFK 236
RLI+AEA+VGKGFYKKR+ H K + + RPECRLTVVVREIT EEEA+IARL+VHNFK
Sbjct: 181 RLIVAEAFVGKGFYKKRLWPHAKGKSSLRVRPECRLTVVVREITAEEEAEIARLRVHNFK 240
Query: 237 KLSKRERRLVPHKLIETTPVWGRKNKPTSQNSGAAVA 273
+L+KR++RLVPH+LIE+ P+WGRKNK + QN A A
Sbjct: 241 RLTKRQKRLVPHQLIESNPIWGRKNKSSGQNLSATPA 277
>Glyma09g40030.1
Length = 266
Score = 285 bits (728), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 165/267 (61%), Positives = 190/267 (71%), Gaps = 18/267 (6%)
Query: 1 MVQWQRHIFPILRHIHK-GVDHVYHSAPKLSISHLSSSFPQGQFQGAWTTTSPSISRPMY 59
MVQWQRH+FP LRHIHK VD P + L +F Q + S
Sbjct: 1 MVQWQRHVFPFLRHIHKRAVD----PTPPI----LLQAFKAQCLQSLLEYVNLSFV---- 48
Query: 60 HCFQHQGISSSTWLLANSPEETXXXXXXXXXXXXXXXKGEDQNQKAVSKPENVQAVLKGI 119
GISSS LLANS EET KGEDQ QK V+K E VQAVLK I
Sbjct: 49 -----TGISSSANLLANSSEETPVLSPLVPVSLLGSSKGEDQKQKVVTKQEKVQAVLKAI 103
Query: 120 KQSPKKVNLVAALVRGMLVKDALLQLQLTVKRAAKTVYQVIHSARANASHNHGLDSDRLI 179
KQSPKKVNLVAALVRGMLVKDAL+QL+LT+KRAAKTVYQVIHSARANASHNHGLD +RLI
Sbjct: 104 KQSPKKVNLVAALVRGMLVKDALMQLELTIKRAAKTVYQVIHSARANASHNHGLDPERLI 163
Query: 180 IAEAYVGKGFYKKRISIHGKCRHGIMHRPECRLTVVVREITPEEEAKIARLKVHNFKKLS 239
+AEA+VGKGFYKKR+ H K + + RPECRLTVVVREIT EEEA+IARL+VHNFKK +
Sbjct: 164 VAEAFVGKGFYKKRLWPHAKGKSSLRVRPECRLTVVVREITAEEEAEIARLRVHNFKKRT 223
Query: 240 KRERRLVPHKLIETTPVWGRKNKPTSQ 266
KR++RLVPH+LI + P+WGRKNK +++
Sbjct: 224 KRQQRLVPHQLIVSNPIWGRKNKSSAE 250
>Glyma11g36270.1
Length = 122
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/74 (66%), Positives = 57/74 (77%), Gaps = 8/74 (10%)
Query: 97 KGEDQNQKAVSKPENVQAVLKGIKQSPKKVNLVAALVRGMLVKDALLQLQLTVKRAAKTV 156
KGEDQ QK V+K VQA SPKKVNLVAALVRGMLVKDAL+QL+LT+KRAAKTV
Sbjct: 36 KGEDQKQKVVTKQVKVQA-------SPKKVNLVAALVRGMLVKDALMQLELTIKRAAKTV 88
Query: 157 YQVIHSARANASHN 170
YQV+ + N +H+
Sbjct: 89 YQVL-VKKNNLTHS 101
>Glyma03g01340.1
Length = 221
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/41 (85%), Positives = 39/41 (95%)
Query: 122 SPKKVNLVAALVRGMLVKDALLQLQLTVKRAAKTVYQVIHS 162
SPKKVNLVAALVRGMLVKDAL+QL+LT+KRAAKTVYQ+ S
Sbjct: 15 SPKKVNLVAALVRGMLVKDALMQLELTIKRAAKTVYQLAKS 55
>Glyma08g48360.1
Length = 158
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 43/63 (68%)
Query: 122 SPKKVNLVAALVRGMLVKDALLQLQLTVKRAAKTVYQVIHSARANASHNHGLDSDRLIIA 181
SPKKVNLVAALVRGMLVKDA +QL+ T+KRAAKTVYQV+ A H + +L
Sbjct: 78 SPKKVNLVAALVRGMLVKDASMQLESTIKRAAKTVYQVVTLALFYLLVAHSCECMQLFFV 137
Query: 182 EAY 184
+
Sbjct: 138 NEF 140
>Glyma13g16660.1
Length = 120
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/38 (86%), Positives = 36/38 (94%)
Query: 122 SPKKVNLVAALVRGMLVKDALLQLQLTVKRAAKTVYQV 159
SPKKVNLVAALVRGMLVKDA +QL+ T+KRAAKTVYQV
Sbjct: 13 SPKKVNLVAALVRGMLVKDASMQLESTIKRAAKTVYQV 50
>Glyma06g48460.1
Length = 131
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/38 (86%), Positives = 36/38 (94%)
Query: 122 SPKKVNLVAALVRGMLVKDALLQLQLTVKRAAKTVYQV 159
SPKKVNLVAALVRGMLVKDA +QL+ T+KRAAKTVYQV
Sbjct: 13 SPKKVNLVAALVRGMLVKDASMQLESTIKRAAKTVYQV 50
>Glyma06g48390.1
Length = 137
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/39 (84%), Positives = 37/39 (94%)
Query: 122 SPKKVNLVAALVRGMLVKDALLQLQLTVKRAAKTVYQVI 160
SPKKVNLVAALVRGMLVKDA +QL+ T+KRAAKTVYQV+
Sbjct: 77 SPKKVNLVAALVRGMLVKDASMQLESTIKRAAKTVYQVV 115
>Glyma08g48330.1
Length = 37
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/37 (86%), Positives = 35/37 (94%)
Query: 122 SPKKVNLVAALVRGMLVKDALLQLQLTVKRAAKTVYQ 158
SPKKVNLVAALVRGMLVKDA +QL+ T+KRAAKTVYQ
Sbjct: 1 SPKKVNLVAALVRGMLVKDASMQLESTIKRAAKTVYQ 37
>Glyma05g09270.1
Length = 209
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 6/133 (4%)
Query: 98 GEDQNQKAVSKPENVQAVLKGIKQSPKKVNLVAALVRGMLVKDALLQLQLTVKRAAKTVY 157
GE ++ K V AV + I+ S K V +RG + L+ L+L RA + +
Sbjct: 81 GEQESNKYVE----AYAVGRNIRMSANKARRVIDQIRGRKYDETLMVLELMPYRACEAIL 136
Query: 158 QVIHSARANASHNHGLDSDRLIIAEAYVGKGFYKKRISIHGKCRHGIMHRPECRLTVVVR 217
+++ SA ANAS+N GL L+I++A V +G KR+ + R + + C +T+ V+
Sbjct: 137 KIVFSAGANASNNLGLSKGSLVISKAEVNEGKTMKRVKPVARGRAHPIKKRTCHITITVK 196
Query: 218 EITPEE--EAKIA 228
+ E EAK A
Sbjct: 197 GLPSESVVEAKPA 209
>Glyma19g00820.1
Length = 198
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
Query: 114 AVLKGIKQSPKKVNLVAALVRGMLVKDALLQLQLTVKRAAKTVYQVIHSARANASHNHGL 173
AV + I+ S K V +RG + L+ L+L RA + + +++ SA ANAS+N GL
Sbjct: 82 AVGRNIRMSANKARRVIDQIRGSKYDETLMVLELMPYRACEAILKIVFSAGANASNNLGL 141
Query: 174 DSDRLIIAEAYVGKGFYKKRISIHGKCRHGIMHRPECRLTVVVREITPE--EEAKIA 228
L+I++A V +G KR+ + R + + C +T+ V+ + E EEAK A
Sbjct: 142 SKGSLVISKAEVNEGKTMKRVKPVARGRAHPIKKRTCHITITVKGLPSESVEEAKPA 198