Miyakogusa Predicted Gene

Lj0g3v0329639.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0329639.1 Non Chatacterized Hit- tr|I1NBW7|I1NBW7_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,57.73,6e-19,coiled-coil,NULL; seg,NULL,CUFF.22450.1
         (163 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g39460.1                                                        92   3e-19
Glyma03g39460.2                                                        91   6e-19
Glyma19g42070.1                                                        77   1e-14

>Glyma03g39460.1 
          Length = 550

 Score = 91.7 bits (226), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 56/98 (57%), Positives = 67/98 (68%), Gaps = 6/98 (6%)

Query: 66  QMMILEQQYHDDLKKELKGVTHTSAGSNVEKETSGG-EKTVEPATKVQENVDDTADMGXX 124
           +MMILEQQY DDLKKEL+GVT+TSAGS   KETS G  +T E    VQENVDD  DM   
Sbjct: 454 KMMILEQQYRDDLKKELQGVTYTSAGS---KETSTGVVQTGESTASVQENVDD--DMSKV 508

Query: 125 XXXXXXXXXXEAMQISNKRKQDQTELLKQRRKRLDEAQ 162
                     EAM+IS K K+ QT+ +KQR+K++DEAQ
Sbjct: 509 MMSRKKRKLAEAMKISKKLKEAQTDRIKQRKKKIDEAQ 546


>Glyma03g39460.2 
          Length = 281

 Score = 90.5 bits (223), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 56/98 (57%), Positives = 67/98 (68%), Gaps = 6/98 (6%)

Query: 66  QMMILEQQYHDDLKKELKGVTHTSAGSNVEKETSGG-EKTVEPATKVQENVDDTADMGXX 124
           +MMILEQQY DDLKKEL+GVT+TSAGS   KETS G  +T E    VQENVDD  DM   
Sbjct: 185 KMMILEQQYRDDLKKELQGVTYTSAGS---KETSTGVVQTGESTASVQENVDD--DMSKV 239

Query: 125 XXXXXXXXXXEAMQISNKRKQDQTELLKQRRKRLDEAQ 162
                     EAM+IS K K+ QT+ +KQR+K++DEAQ
Sbjct: 240 MMSRKKRKLAEAMKISKKLKEAQTDRIKQRKKKIDEAQ 277


>Glyma19g42070.1 
          Length = 603

 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/97 (49%), Positives = 63/97 (64%), Gaps = 3/97 (3%)

Query: 66  QMMILEQQYHDDLKKELKGVTHTSAGSNVEKETSGGEKTVEPATKVQENVDDTADMGXXX 125
           +MMILEQQY DDLKKEL+G+T TSAGS +E  T   + T E  T V ENVD   DMG   
Sbjct: 506 KMMILEQQYRDDLKKELQGITCTSAGS-IETSTEVVQ-TGESTTSVHENVDHD-DMGKLM 562

Query: 126 XXXXXXXXXEAMQISNKRKQDQTELLKQRRKRLDEAQ 162
                    +A++ S +R + QT+L+KQR+K++DE Q
Sbjct: 563 LSRKRRGLVKAIEKSRERNKAQTDLIKQRKKKIDEEQ 599