Miyakogusa Predicted Gene
- Lj0g3v0329519.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0329519.1 Non Chatacterized Hit- tr|B9SFW2|B9SFW2_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,35.45,2e-18,coiled-coil,NULL; seg,NULL,CUFF.23259.1
(387 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma10g41600.1 326 2e-89
Glyma20g25620.1 242 4e-64
Glyma09g18050.1 187 2e-47
>Glyma10g41600.1
Length = 707
Score = 326 bits (836), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 212/394 (53%), Positives = 233/394 (59%), Gaps = 38/394 (9%)
Query: 1 MGVPINSA-VVSGDYQNRVFSDDERSDHGVPVGYRKXXXXXXXXXXXXXXXXXXXXXXXX 59
+GVPI A VV+G+Y NRV SDDERSDHGV VGYRK
Sbjct: 333 VGVPIGPATVVAGEYHNRVVSDDERSDHGVSVGYRKPPTPPPQVQSQTQAQSQAQTQTLA 392
Query: 60 AQFQQRSSGG---TXXXXXXXXXXXXXXANAMSRQKPVIYQEQVLIQSGTTRVPTHSNPV 116
QFQQ+S+GG ANA+SR KP +YQEQV IQSGTTRVP SNPV
Sbjct: 393 PQFQQKSTGGGAVVDLPSPDSVSSDSSLANAISRSKPAVYQEQVQIQSGTTRVP--SNPV 450
Query: 117 DPKLNVSDPQSRIQVQQH-HEQGYLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 175
DPKLNVSDP RIQ+QQH + GY
Sbjct: 451 DPKLNVSDPHGRIQMQQHVQDPGY----------LLQQQFEQHQQLQSQQPQQQFEQQHH 500
Query: 176 XXXXXXXXXXXXYIHGTQFIHHNPANAIPAYYPVYPSQQQTHPQHAQVYYVPARQAQAYN 235
+IHGT FIHHNPA IPAYYPVYPSQQ HPQH QVYYV ARQAQAYN
Sbjct: 501 QHQQTLPQQQQQFIHGTHFIHHNPA--IPAYYPVYPSQQ--HPQHPQVYYVTARQAQAYN 556
Query: 236 LSMQQANMGESG------KPQTPPNPTTLVPQTAAYNNPMRNAPLPKTEMTAAGYRTATG 289
L +QQANMGES +PQTPPNP+TLV Q A Y NP+RNAP+PKTEM A YR AT
Sbjct: 557 LPVQQANMGESAGNIASSRPQTPPNPSTLVQQPATY-NPIRNAPMPKTEMNA--YRAATA 613
Query: 290 GSPQLVQVPANQLQHQQQYVTYSQIHHXXXXXXXXXXXXXXXXXDYVDPAHAQIYYSQPL 349
G+PQLVQVP + QHQQQYVTYSQIHH DY DPAHAQIYYSQP+
Sbjct: 614 GTPQLVQVPTS--QHQQQYVTYSQIHHPSQSMAPNSAAPANYAFDYADPAHAQIYYSQPM 671
Query: 350 APTMPSQYQTMTAAAMVLPEGSSAQLPSDGMKQQ 383
APTMPSQYQT M++ EG SAQ PSD +KQQ
Sbjct: 672 APTMPSQYQT-----MMMQEG-SAQHPSDSVKQQ 699
>Glyma20g25620.1
Length = 721
Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 138/202 (68%), Positives = 152/202 (75%), Gaps = 16/202 (7%)
Query: 188 YIHGTQFIHHNPANAIPAYYPVYPSQQQTHPQHAQVYYVPARQAQAYNLSMQQANMGESG 247
+IHG FIHHNPA IPAYYPVYPSQQ HPQH QVYYV ARQAQAYNL +QQANMGES
Sbjct: 521 FIHGAHFIHHNPA--IPAYYPVYPSQQ--HPQHPQVYYVTARQAQAYNLPLQQANMGESA 576
Query: 248 ------KPQTPPNPTTLVPQTAAYNNPMRNAPLPKTEMTAAGYRTATGGSPQLVQVPANQ 301
+PQTPPNP+TLV Q A YN P+RNAP+PKTEM A YR AT G+PQLVQVP +Q
Sbjct: 577 GNIASSRPQTPPNPSTLVQQPATYN-PIRNAPMPKTEMNA--YRAATAGNPQLVQVPTSQ 633
Query: 302 LQHQQQYVTYSQIHHXXXXXXXXXXXXXXXXXDYVDPAHAQIYYSQPLAPTMPSQYQTMT 361
HQQQYVTYSQIHH DY DPAHAQIYYSQP+APT+PSQYQTMT
Sbjct: 634 --HQQQYVTYSQIHHPSQSMAPNSAAPANYAFDYADPAHAQIYYSQPMAPTIPSQYQTMT 691
Query: 362 AAAMVLPEGSSAQLPSDGMKQQ 383
AAA+++ EG SAQ PSD +KQQ
Sbjct: 692 AAAVMMQEG-SAQHPSDSVKQQ 712
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/144 (49%), Positives = 81/144 (56%), Gaps = 7/144 (4%)
Query: 1 MGVPINSA-VVSGDYQNRVFSDDERSDHGVPVGYRKXXXXXXXXXXXXXXXXXXXXXXXX 59
+GVPI A VV+G++ NRV SDDERSDHGVPVGYRK
Sbjct: 328 VGVPIGPATVVAGEHHNRVVSDDERSDHGVPVGYRKPPTPQPQVQSQTQAQSQAQTQTLA 387
Query: 60 AQFQQRSSGG---TXXXXXXXXXXXXXXANAMSRQKPVIYQEQVLIQSGTTRVPTHSNPV 116
QF Q+S+ G ANA+SR K +YQEQ IQ GTTRVP SNPV
Sbjct: 388 PQFHQKSTAGGAVVDLPSPDSVSSDSSLANAISRSKAAVYQEQAQIQPGTTRVP--SNPV 445
Query: 117 DPKLNVSDPQSRIQVQQH-HEQGY 139
DPKLNVSD RIQ+QQH H+ GY
Sbjct: 446 DPKLNVSDLHGRIQMQQHVHDPGY 469
>Glyma09g18050.1
Length = 401
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 153/380 (40%), Positives = 189/380 (49%), Gaps = 59/380 (15%)
Query: 16 NRVFSDDERSDHGVPVGYRKXXXXXXXXXXXXXXXXXXXXXXXXAQFQQRSSGGTXXXXX 75
NR+ SDDERSDHGVP+G+RK QFQQ+S G
Sbjct: 58 NRLVSDDERSDHGVPLGHRKSPTPPLQPQPH--------------QFQQKSPHGVVDLPS 103
Query: 76 XXXXXXXXXA-NAMSRQKPVIYQEQVLIQSGTTRVPTHSNPVDPKLNVSDPQSRIQVQQH 134
NAM R KP IYQ+QV IQ G+++VP++++ VDPKLNV+D Q IQ+QQH
Sbjct: 104 PDSLSSDSSLSNAMLRPKPAIYQDQVQIQYGSSQVPSNAS-VDPKLNVTDQQGWIQMQQH 162
Query: 135 -HEQGYLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYIHGTQ 193
E GY+L YIH T
Sbjct: 163 VQEAGYVLQPQFDQLPLPQQHQTQPPQQQHQPQQ--------------------YIHNTH 202
Query: 194 FIHHNPANAIP---AYYPVYPSQQQTHPQHAQ-------VYYVPARQAQAYNLSMQQANM 243
IHH + ++P +YYPV QQQ H QH VYYV ARQAQ YNLS+Q AN
Sbjct: 203 LIHHTLSGSVPIPASYYPV--CQQQLHTQHLHHLDQQYPVYYVQARQAQPYNLSVQLANA 260
Query: 244 GESGKPQTPPNPTTLVPQTAAYNNPMRNAPLPKTEMTAAGYRTATGGSPQLVQVPANQLQ 303
ES +AAYN+ RN P EM A RTA +PQLVQV +++
Sbjct: 261 AESATTMPSSQSQNQP-SSAAYNS-TRN---PNFEMAAGACRTAPA-TPQLVQVSSSK-- 312
Query: 304 HQQQYVTYSQIHHXXXXXXXXXXXX-XXXXXDYVDPAHAQIYYSQPLAPTMPSQYQTMTA 362
HQQQYV +SQI+H +Y DPA AQ++YSQPLAP MPS YQTMTA
Sbjct: 313 HQQQYVAHSQIYHRHPQSMPPKSAVPANYAYNYADPALAQVFYSQPLAPFMPSHYQTMTA 372
Query: 363 AAMVLPEGSSAQLPSDGMKQ 382
A+++ E SA+LPSD MK+
Sbjct: 373 ASVMRTE-VSAKLPSDSMKK 391