Miyakogusa Predicted Gene

Lj0g3v0329339.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0329339.1 Non Chatacterized Hit- tr|K4BXE5|K4BXE5_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,37.5,6e-18,SUBFAMILY NOT NAMED,NULL; SOX TRANSCRIPTION
FACTOR,NULL; seg,NULL,CUFF.22423.1
         (413 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g10880.1                                                       496   e-140

>Glyma02g10880.1 
          Length = 877

 Score =  496 bits (1276), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 267/379 (70%), Positives = 290/379 (76%), Gaps = 6/379 (1%)

Query: 1   MVSGPAFPHNSSVPRAASSSPGVPNFQTSSPSSASQDLMTSTENGQDTKPMASMLQPPLG 60
           MVSGPAFPHNSSVPRA S+S GVP+ QTSSPSS SQD++T+ E  QDTKP  SML  PL 
Sbjct: 299 MVSGPAFPHNSSVPRATSTSQGVPSLQTSSPSSVSQDIITNNETAQDTKPTVSML--PLR 356

Query: 61  PVHPAQVNVNSWNNLSQAPQVMNSAALSGGTSMGLPSMGQTPVAMHMSNMISSGMASSVP 120
           PV+P Q NVN  NNLSQA QVMNSAALSGGTSMGLPSMGQTPVAMHMSNMISSGM SSVP
Sbjct: 357 PVNPVQANVNILNNLSQARQVMNSAALSGGTSMGLPSMGQTPVAMHMSNMISSGMTSSVP 416

Query: 121 AAQNAFXXXXXXXXXXXXXXXLIAPAQVGQXXXXXXXXXXXXXXXXXXXXGISQPLSNLQ 180
           AAQN F               L  PAQVGQ                    GISQPL NLQ
Sbjct: 417 AAQNVFSSGQSGITSMTSSGPLTVPAQVGQNSGLGSLTSNTSNLSSSSNIGISQPLGNLQ 476

Query: 181 GAVSMGQRVPGMSQGNISGAQVVQGRVTMNQNV----GPSVVSSGNGTMIPTPGMSLQVQ 236
           G VS+GQ+V GMSQGN+SGAQ+VQG V+MNQNV    G SVVSSG GTMIPTPGMS  VQ
Sbjct: 477 GVVSIGQQVSGMSQGNLSGAQMVQGGVSMNQNVMSGLGQSVVSSGTGTMIPTPGMSQPVQ 536

Query: 237 SGVQPLGNNAAPKMTLPQQTSGGMQPTQSKYIKIWEGSLCGIKQEQPVFITKLEGYRNVS 296
           S +QPL NNAA  M L QQTSGGMQ  QSKY+K+WEGSL G +Q QPVFITKLEGYRN S
Sbjct: 537 SVMQPLVNNAAANMPLSQQTSGGMQSAQSKYVKVWEGSLSGQRQGQPVFITKLEGYRNSS 596

Query: 297 APETIAENWPPVMQMVRLIPQDHMNDEHFVGKADFVVFRVMNPHRFFGQLQEKKLCAVIP 356
           A ET+A NWPPVMQ+VRLI QDHMN++ +VGKADF+VFR MNPH F GQLQEKKLCAVI 
Sbjct: 597 ASETLAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNPHGFLGQLQEKKLCAVIQ 656

Query: 357 LPSQTLLLSISNKASRLIG 375
           LPSQTLLLS+S+KA RLIG
Sbjct: 657 LPSQTLLLSVSDKAFRLIG 675