Miyakogusa Predicted Gene

Lj0g3v0328779.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0328779.1 tr|A4RU74|A4RU74_OSTLU Predicted protein
OS=Ostreococcus lucimarinus (strain CCE9901)
GN=OSTLU_14554,24.5,2e-18, ,CUFF.22387.1
         (266 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g21060.1                                                       458   e-129

>Glyma06g21060.1 
          Length = 764

 Score =  458 bits (1178), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 218/259 (84%), Positives = 232/259 (89%), Gaps = 12/259 (4%)

Query: 2   YLCQLYSSGSNRCAEFSESWNKIASLLDGVANIGVVELGEKELAIYLADKRSTGKPFFRN 61
           +L QLYSSGS RCA+FS+SWNKIASLLD  ANIG+VELGEKELAIYLAD+RSTGKPFFRN
Sbjct: 233 WLIQLYSSGSERCAQFSKSWNKIASLLDVFANIGMVELGEKELAIYLADRRSTGKPFFRN 292

Query: 62  GIPSLVAIPPGCHAAKCFRRFDGELTVDKVTNWFATTVLTLPQINYYSKESLVPNFLGKS 121
           GIPSLVAIP GC ++KC  RFDGELTVD VTNWFATTVL LPQINYYS+ESLV       
Sbjct: 293 GIPSLVAIPAGCRSSKCIIRFDGELTVDTVTNWFATTVLALPQINYYSRESLV------- 345

Query: 122 SQHKVKVIFFSKTGERATPFMRQAAKDYWADASFAFILWREEESSYWWGAFGVESAPAIV 181
                KVIFFS +GERA PF+RQAAKDYWA ASFAFILWREEESSYWWGAFGVESAPAIV
Sbjct: 346 -----KVIFFSNSGERAAPFIRQAAKDYWASASFAFILWREEESSYWWGAFGVESAPAIV 400

Query: 182 FLKDPGVKPVVHHGSVNNTYFLNMMENNKQQELPQLRSVTSMELGCDPRGYSRAGYDTII 241
           FLKDPGVKPVVHHGSVNN++FLN+MENNKQQELPQLRSVTSMELGCDP GYSRAGYDT+ 
Sbjct: 401 FLKDPGVKPVVHHGSVNNSFFLNLMENNKQQELPQLRSVTSMELGCDPHGYSRAGYDTVT 460

Query: 242 WYCAIAVGRPSLELNKMRE 260
           WYCAIAVGRPSLELNKMRE
Sbjct: 461 WYCAIAVGRPSLELNKMRE 479