Miyakogusa Predicted Gene
- Lj0g3v0328679.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0328679.1 Non Chatacterized Hit- tr|I1GP25|I1GP25_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,32.89,3e-18,seg,NULL,gene.g25648.t1.1
(254 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma04g43270.1 276 2e-74
Glyma06g11410.4 225 4e-59
Glyma06g11410.3 225 4e-59
Glyma06g11410.2 225 4e-59
Glyma06g11410.1 223 1e-58
Glyma13g02470.3 196 1e-50
Glyma13g02470.2 196 1e-50
Glyma13g02470.1 196 1e-50
Glyma14g33650.1 139 2e-33
Glyma14g33630.1 135 4e-32
Glyma15g05400.1 70 1e-12
Glyma05g25290.1 66 3e-11
>Glyma04g43270.1
Length = 566
Score = 276 bits (705), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 159/270 (58%), Positives = 175/270 (64%), Gaps = 29/270 (10%)
Query: 1 MELHDRTSFRIEGIEGEFDRICKSLGLSGPEDFAIPAAAWEAMKVRSSSDILPRLKLNEL 60
ME +DRTSFRIEG+EGEFDRIC+SLGLSGPEDFAIPAAAWEAMK RSSSDILPRLKL+ L
Sbjct: 57 MEFYDRTSFRIEGVEGEFDRICRSLGLSGPEDFAIPAAAWEAMKFRSSSDILPRLKLDNL 116
Query: 61 DLQE-------KVEEVR--NAVEGGELSENCVEGVRDRVRDEAXXXXXXXXXXXXXXXXI 111
D+ E KV EVR + E GELSEN GV D VR I
Sbjct: 117 DIPEEDVEEESKVNEVRMFKSAEEGELSEN--HGVSDSVR---------VREIDESSNGI 165
Query: 112 NGVRPPMLKPPPGVRVPVVDHHACSTWDLFRELAPXXXXXXXXXXXXXXXXXXXXXXXXX 171
G+RPPMLKPPPG RV VVD ACS+WDL R+LAP
Sbjct: 166 KGIRPPMLKPPPGTRVQVVDDSACSSWDLLRDLAPQGGEGLPLNHSNEEREVAEKEEGEV 225
Query: 172 XXXXSVSPKREEEQGVGDAERIAEIDAGLSESSSFTTSNEGDSSST-------DVSPNTR 224
SPKREEEQ V +A RIAEI AGLSES SF+TSNE DSSS+ ++SP R
Sbjct: 226 GTKE--SPKREEEQNVDNAARIAEIVAGLSESCSFSTSNEDDSSSSTTDPRSNNISPQGR 283
Query: 225 IKRVITTGCWQKGEFLGGGSFGSVYEGISE 254
IKR+IT G WQKGEFLGGGSFGSVYEGIS+
Sbjct: 284 IKRIITAGSWQKGEFLGGGSFGSVYEGISD 313
>Glyma06g11410.4
Length = 564
Score = 225 bits (573), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 140/277 (50%), Positives = 157/277 (56%), Gaps = 38/277 (13%)
Query: 1 MELHDRTSFRIEGIEGEFDRICKSLGLSGPEDFAIPAAAWEAMKVRSSSDILPRLKLNEL 60
ME +DRTSFRIEG+EGEFDRIC+SLGLSGPEDFAIPAAAWEA+K R SSDILPRLKL+ L
Sbjct: 41 MEFYDRTSFRIEGVEGEFDRICRSLGLSGPEDFAIPAAAWEAIKFRYSSDILPRLKLDNL 100
Query: 61 DLQE--------KVEE--VRNAVEGGELSENCVEGVRDRVRDEAXXXXXXXXXXXXXXXX 110
D+ E KV E + N+VE G+LSE
Sbjct: 101 DIPEEEEGEEELKVNEDIIVNSVEEGKLSEK-----HGDSSSVRVRVRVRVREIDESSTG 155
Query: 111 INGVRPPMLKPPPGVRVPVVDHHACSTWDLFRELAPX------XXXXXXXXXXXXXXXXX 164
I G RPPMLKPPPG RV VVD CSTWDL R+LAP
Sbjct: 156 IKGTRPPMLKPPPGARVQVVDDSTCSTWDLLRDLAPQGEEGLPLNRSENESEVAREVERG 215
Query: 165 XXXXXXXXXXXSVSPKREEEQGVGDAERIAEIDAGLSESSSFTTSNE-------GDSSST 217
SPKREEE+ V AGLSES SF+TSNE D +S
Sbjct: 216 AVEKEEGEVGTRESPKREEEENV----------AGLSESCSFSTSNEDDSSSSTTDPTSN 265
Query: 218 DVSPNTRIKRVITTGCWQKGEFLGGGSFGSVYEGISE 254
++SP RIKR+IT WQKGEFLGGGSFGSVYEGIS+
Sbjct: 266 NISPQGRIKRIITAESWQKGEFLGGGSFGSVYEGISD 302
>Glyma06g11410.3
Length = 564
Score = 225 bits (573), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 140/277 (50%), Positives = 157/277 (56%), Gaps = 38/277 (13%)
Query: 1 MELHDRTSFRIEGIEGEFDRICKSLGLSGPEDFAIPAAAWEAMKVRSSSDILPRLKLNEL 60
ME +DRTSFRIEG+EGEFDRIC+SLGLSGPEDFAIPAAAWEA+K R SSDILPRLKL+ L
Sbjct: 41 MEFYDRTSFRIEGVEGEFDRICRSLGLSGPEDFAIPAAAWEAIKFRYSSDILPRLKLDNL 100
Query: 61 DLQE--------KVEE--VRNAVEGGELSENCVEGVRDRVRDEAXXXXXXXXXXXXXXXX 110
D+ E KV E + N+VE G+LSE
Sbjct: 101 DIPEEEEGEEELKVNEDIIVNSVEEGKLSEK-----HGDSSSVRVRVRVRVREIDESSTG 155
Query: 111 INGVRPPMLKPPPGVRVPVVDHHACSTWDLFRELAPX------XXXXXXXXXXXXXXXXX 164
I G RPPMLKPPPG RV VVD CSTWDL R+LAP
Sbjct: 156 IKGTRPPMLKPPPGARVQVVDDSTCSTWDLLRDLAPQGEEGLPLNRSENESEVAREVERG 215
Query: 165 XXXXXXXXXXXSVSPKREEEQGVGDAERIAEIDAGLSESSSFTTSNE-------GDSSST 217
SPKREEE+ V AGLSES SF+TSNE D +S
Sbjct: 216 AVEKEEGEVGTRESPKREEEENV----------AGLSESCSFSTSNEDDSSSSTTDPTSN 265
Query: 218 DVSPNTRIKRVITTGCWQKGEFLGGGSFGSVYEGISE 254
++SP RIKR+IT WQKGEFLGGGSFGSVYEGIS+
Sbjct: 266 NISPQGRIKRIITAESWQKGEFLGGGSFGSVYEGISD 302
>Glyma06g11410.2
Length = 555
Score = 225 bits (573), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 140/277 (50%), Positives = 157/277 (56%), Gaps = 38/277 (13%)
Query: 1 MELHDRTSFRIEGIEGEFDRICKSLGLSGPEDFAIPAAAWEAMKVRSSSDILPRLKLNEL 60
ME +DRTSFRIEG+EGEFDRIC+SLGLSGPEDFAIPAAAWEA+K R SSDILPRLKL+ L
Sbjct: 41 MEFYDRTSFRIEGVEGEFDRICRSLGLSGPEDFAIPAAAWEAIKFRYSSDILPRLKLDNL 100
Query: 61 DLQE--------KVEE--VRNAVEGGELSENCVEGVRDRVRDEAXXXXXXXXXXXXXXXX 110
D+ E KV E + N+VE G+LSE
Sbjct: 101 DIPEEEEGEEELKVNEDIIVNSVEEGKLSEK-----HGDSSSVRVRVRVRVREIDESSTG 155
Query: 111 INGVRPPMLKPPPGVRVPVVDHHACSTWDLFRELAPX------XXXXXXXXXXXXXXXXX 164
I G RPPMLKPPPG RV VVD CSTWDL R+LAP
Sbjct: 156 IKGTRPPMLKPPPGARVQVVDDSTCSTWDLLRDLAPQGEEGLPLNRSENESEVAREVERG 215
Query: 165 XXXXXXXXXXXSVSPKREEEQGVGDAERIAEIDAGLSESSSFTTSNE-------GDSSST 217
SPKREEE+ V AGLSES SF+TSNE D +S
Sbjct: 216 AVEKEEGEVGTRESPKREEEENV----------AGLSESCSFSTSNEDDSSSSTTDPTSN 265
Query: 218 DVSPNTRIKRVITTGCWQKGEFLGGGSFGSVYEGISE 254
++SP RIKR+IT WQKGEFLGGGSFGSVYEGIS+
Sbjct: 266 NISPQGRIKRIITAESWQKGEFLGGGSFGSVYEGISD 302
>Glyma06g11410.1
Length = 925
Score = 223 bits (569), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 140/277 (50%), Positives = 157/277 (56%), Gaps = 38/277 (13%)
Query: 1 MELHDRTSFRIEGIEGEFDRICKSLGLSGPEDFAIPAAAWEAMKVRSSSDILPRLKLNEL 60
ME +DRTSFRIEG+EGEFDRIC+SLGLSGPEDFAIPAAAWEA+K R SSDILPRLKL+ L
Sbjct: 389 MEFYDRTSFRIEGVEGEFDRICRSLGLSGPEDFAIPAAAWEAIKFRYSSDILPRLKLDNL 448
Query: 61 DLQE--------KVEE--VRNAVEGGELSENCVEGVRDRVRDEAXXXXXXXXXXXXXXXX 110
D+ E KV E + N+VE G+LSE
Sbjct: 449 DIPEEEEGEEELKVNEDIIVNSVEEGKLSEK-----HGDSSSVRVRVRVRVREIDESSTG 503
Query: 111 INGVRPPMLKPPPGVRVPVVDHHACSTWDLFRELAPX------XXXXXXXXXXXXXXXXX 164
I G RPPMLKPPPG RV VVD CSTWDL R+LAP
Sbjct: 504 IKGTRPPMLKPPPGARVQVVDDSTCSTWDLLRDLAPQGEEGLPLNRSENESEVAREVERG 563
Query: 165 XXXXXXXXXXXSVSPKREEEQGVGDAERIAEIDAGLSESSSFTTSNE-------GDSSST 217
SPKREEE+ V AGLSES SF+TSNE D +S
Sbjct: 564 AVEKEEGEVGTRESPKREEEENV----------AGLSESCSFSTSNEDDSSSSTTDPTSN 613
Query: 218 DVSPNTRIKRVITTGCWQKGEFLGGGSFGSVYEGISE 254
++SP RIKR+IT WQKGEFLGGGSFGSVYEGIS+
Sbjct: 614 NISPQGRIKRIITAESWQKGEFLGGGSFGSVYEGISD 650
>Glyma13g02470.3
Length = 594
Score = 196 bits (499), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 130/276 (47%), Positives = 152/276 (55%), Gaps = 38/276 (13%)
Query: 1 MELHDRTSFRIEGIEGEFDRICKSLGLSGPEDFAIPAAAWEAMKVRSSSDILPRLKLNEL 60
M+L+DRTSFRIEG+EGEFDRIC+SLGLSGPEDF+IPAAAWEAMK+R SSD+LPR +
Sbjct: 83 MDLYDRTSFRIEGVEGEFDRICRSLGLSGPEDFSIPAAAWEAMKLRCSSDLLPRRPKHGG 142
Query: 61 DLQEKVEEVRNAVEGGELSENCVEGVRDRVRDEAXXXXXXXXXXXXXXXXINGVRPPMLK 120
D ++ + + +E E + R RV DE I G RPPMLK
Sbjct: 143 DEFDEEAKEKEEIEVVESED------RARVLDEC----VVSAESSGCCGGIKGFRPPMLK 192
Query: 121 PPPGVRVPVVDHHACSTWDLFRELAPXXXXXXXXXXXXXXX---------------XXXX 165
PPPGVRV VVD CSTWDL R+ AP
Sbjct: 193 PPPGVRVSVVDDATCSTWDLMRDFAPNGEGEGKDSYVELNSFDDEDDHERVEKEEEEDEE 252
Query: 166 XXXXXXXXXXSVSPKREEEQGVGDAERIAEIDAGLSESSSFTTSNEGDSSST-------D 218
V K EE+ +A RIAEI + + S F+T NE DSSST
Sbjct: 253 DEEEEEGEVGGVREKSVEEE---NAARIAEI---VDDFSGFSTPNEDDSSSTTTGPRSNS 306
Query: 219 VSPNTRIKRVITTGCWQKGEFLGGGSFGSVYEGISE 254
+SPN RIKRVIT G WQKG+ LG GSFGSVYEGISE
Sbjct: 307 ISPNGRIKRVITAGNWQKGDLLGRGSFGSVYEGISE 342
>Glyma13g02470.2
Length = 594
Score = 196 bits (499), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 130/276 (47%), Positives = 152/276 (55%), Gaps = 38/276 (13%)
Query: 1 MELHDRTSFRIEGIEGEFDRICKSLGLSGPEDFAIPAAAWEAMKVRSSSDILPRLKLNEL 60
M+L+DRTSFRIEG+EGEFDRIC+SLGLSGPEDF+IPAAAWEAMK+R SSD+LPR +
Sbjct: 83 MDLYDRTSFRIEGVEGEFDRICRSLGLSGPEDFSIPAAAWEAMKLRCSSDLLPRRPKHGG 142
Query: 61 DLQEKVEEVRNAVEGGELSENCVEGVRDRVRDEAXXXXXXXXXXXXXXXXINGVRPPMLK 120
D ++ + + +E E + R RV DE I G RPPMLK
Sbjct: 143 DEFDEEAKEKEEIEVVESED------RARVLDEC----VVSAESSGCCGGIKGFRPPMLK 192
Query: 121 PPPGVRVPVVDHHACSTWDLFRELAPXXXXXXXXXXXXXXX---------------XXXX 165
PPPGVRV VVD CSTWDL R+ AP
Sbjct: 193 PPPGVRVSVVDDATCSTWDLMRDFAPNGEGEGKDSYVELNSFDDEDDHERVEKEEEEDEE 252
Query: 166 XXXXXXXXXXSVSPKREEEQGVGDAERIAEIDAGLSESSSFTTSNEGDSSST-------D 218
V K EE+ +A RIAEI + + S F+T NE DSSST
Sbjct: 253 DEEEEEGEVGGVREKSVEEE---NAARIAEI---VDDFSGFSTPNEDDSSSTTTGPRSNS 306
Query: 219 VSPNTRIKRVITTGCWQKGEFLGGGSFGSVYEGISE 254
+SPN RIKRVIT G WQKG+ LG GSFGSVYEGISE
Sbjct: 307 ISPNGRIKRVITAGNWQKGDLLGRGSFGSVYEGISE 342
>Glyma13g02470.1
Length = 594
Score = 196 bits (499), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 130/276 (47%), Positives = 152/276 (55%), Gaps = 38/276 (13%)
Query: 1 MELHDRTSFRIEGIEGEFDRICKSLGLSGPEDFAIPAAAWEAMKVRSSSDILPRLKLNEL 60
M+L+DRTSFRIEG+EGEFDRIC+SLGLSGPEDF+IPAAAWEAMK+R SSD+LPR +
Sbjct: 83 MDLYDRTSFRIEGVEGEFDRICRSLGLSGPEDFSIPAAAWEAMKLRCSSDLLPRRPKHGG 142
Query: 61 DLQEKVEEVRNAVEGGELSENCVEGVRDRVRDEAXXXXXXXXXXXXXXXXINGVRPPMLK 120
D ++ + + +E E + R RV DE I G RPPMLK
Sbjct: 143 DEFDEEAKEKEEIEVVESED------RARVLDEC----VVSAESSGCCGGIKGFRPPMLK 192
Query: 121 PPPGVRVPVVDHHACSTWDLFRELAPXXXXXXXXXXXXXXX---------------XXXX 165
PPPGVRV VVD CSTWDL R+ AP
Sbjct: 193 PPPGVRVSVVDDATCSTWDLMRDFAPNGEGEGKDSYVELNSFDDEDDHERVEKEEEEDEE 252
Query: 166 XXXXXXXXXXSVSPKREEEQGVGDAERIAEIDAGLSESSSFTTSNEGDSSST-------D 218
V K EE+ +A RIAEI + + S F+T NE DSSST
Sbjct: 253 DEEEEEGEVGGVREKSVEEE---NAARIAEI---VDDFSGFSTPNEDDSSSTTTGPRSNS 306
Query: 219 VSPNTRIKRVITTGCWQKGEFLGGGSFGSVYEGISE 254
+SPN RIKRVIT G WQKG+ LG GSFGSVYEGISE
Sbjct: 307 ISPNGRIKRVITAGNWQKGDLLGRGSFGSVYEGISE 342
>Glyma14g33650.1
Length = 590
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/146 (54%), Positives = 92/146 (63%), Gaps = 4/146 (2%)
Query: 1 MELHDRTSFRIEGIEGEFDRICKSLGLSGPEDFAIPAAAWEAMKVRSSSDILPRLKLNEL 60
MEL DR SFRIEG+EGEFD+IC+SLGLSGPEDF+IPAAAWEAMK+R SSD+LPR +
Sbjct: 76 MELFDRKSFRIEGVEGEFDQICRSLGLSGPEDFSIPAAAWEAMKLRCSSDLLPRRPKHGG 135
Query: 61 DLQEKVEEVRNAVEGGELSENCVEGVRDRVRDEAXXXXXXXXXXXXXXXXINGVRPPMLK 120
+ +E EE + + R RV DE I G RPPMLK
Sbjct: 136 EEEEFDEEPKEKEKEEVEIAVLESEDRARVLDEC----VVPAESSGCCGGIKGFRPPMLK 191
Query: 121 PPPGVRVPVVDHHACSTWDLFRELAP 146
PPPGVRV VVD CSTWDL R+ AP
Sbjct: 192 PPPGVRVSVVDDATCSTWDLMRDFAP 217
>Glyma14g33630.1
Length = 539
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/269 (39%), Positives = 128/269 (47%), Gaps = 33/269 (12%)
Query: 1 MELHDRTSFRIEGIEGEFDRICKSLGLSGPEDFAIPAAAWEAMKVRSSSDILPRLKLNEL 60
ME +D+ R EG+E E +++C+SLGLS EDF+IPAA WEA+K+RSS D+LP +
Sbjct: 37 MEFYDQADIRFEGVEAELNQLCQSLGLSSIEDFSIPAADWEAIKLRSSLDLLPPPRRP-- 94
Query: 61 DLQEKVEEVRNAVEGGELSENCVEGVRDRVRDEAXXXXXXXXXXXXXXXXINGVR--PPM 118
N GGE + + R RV DE I G +
Sbjct: 95 ----------NRGGGGEFDDESED--RARVLDEC-VVPAESSGCCGGSCRIKGFQPLMLT 141
Query: 119 LKPPPGVRVPVVDHHACSTWDLFRELAP------XXXXXXXXXXXXXXXXXXXXXXXXXX 172
P PGV V VVD CSTWDL R+ AP
Sbjct: 142 PPPTPGVWVSVVDDATCSTWDLMRDFAPKGEGGGKDSYVELNSSDDEDDHEREEEEEEEE 201
Query: 173 XXXSVSPKREEEQGVGDAERIAEIDAGLSESSSFTTSNEGDSSST-------DVSPNTRI 225
V R E +A AEI + + S F+TSNE DSS T ++SPN RI
Sbjct: 202 EEEEVGGVRVESVEEENAATFAEI---VGDFSGFSTSNEDDSSGTTTGPRSNNISPNGRI 258
Query: 226 KRVITTGCWQKGEFLGGGSFGSVYEGISE 254
KRVIT G WQKGE LG GSFGSVYEGISE
Sbjct: 259 KRVITAGNWQKGELLGRGSFGSVYEGISE 287
>Glyma15g05400.1
Length = 428
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 40/47 (85%), Gaps = 3/47 (6%)
Query: 5 DRTSFRIEGIEGEFDRICKSLGLSGPEDFAIPAAAWE---AMKVRSS 48
++ SFR++GI+GEFDRI +SLGLSGPEDFAIPAAAWE A K RSS
Sbjct: 40 NQRSFRVKGIDGEFDRILRSLGLSGPEDFAIPAAAWEEARAHKARSS 86
>Glyma05g25290.1
Length = 490
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 36/46 (78%)
Query: 3 LHDRTSFRIEGIEGEFDRICKSLGLSGPEDFAIPAAAWEAMKVRSS 48
L +TSFR+ G +GEFDRI ++LGLSGPEDF+IP A WEA K R S
Sbjct: 61 LDHQTSFRLFGFDGEFDRIFQTLGLSGPEDFSIPTADWEARKARLS 106