Miyakogusa Predicted Gene

Lj0g3v0328469.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0328469.1 tr|D8QY72|D8QY72_SELML Cytosine-specific
methyltransferase OS=Selaginella moellendorffii
GN=MET1-1_2,45.71,5e-19,seg,NULL; DNA (CYTOSINE-5)-METHYLTRANSFERASE 1
(DNMT1),NULL; CYTOSINE-SPECIFIC METHYLTRANSFERASE,C-5,CUFF.22358.1
         (159 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g36150.1                                                       203   6e-53
Glyma06g18790.1                                                       177   5e-45

>Glyma04g36150.1 
          Length = 1495

 Score =  203 bits (516), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 94/136 (69%), Positives = 116/136 (85%), Gaps = 1/136 (0%)

Query: 25  PKQAVSCDNLKERSISTSKKSCLTEIKKDQVVEEE-LAVRLTSDQDDGRPNRRITDFVLH 83
           PK+A +C NLKE+S    +KSCL E +KD +VEEE LAVR+T+ QD+G PNRRIT+F+LH
Sbjct: 2   PKRAAACKNLKEKSFLIYEKSCLIETEKDHIVEEESLAVRMTAGQDNGCPNRRITEFILH 61

Query: 84  DESGTGQPLEMLEVKDLFISGVILPLEVSTEKKKEKRIRCEGFGRIESWDISGYEDGSPV 143
           DE+G  QPLE+LEV DLFI+G++LPLE S+ KKKEK ++CEGFGRIESWDISGYEDGSPV
Sbjct: 62  DETGKSQPLEVLEVDDLFITGLVLPLEASSGKKKEKGVKCEGFGRIESWDISGYEDGSPV 121

Query: 144 IWLSIDMADYECFKPA 159
           IWLS ++ADY+C KPA
Sbjct: 122 IWLSTEVADYDCQKPA 137


>Glyma06g18790.1 
          Length = 1482

 Score =  177 bits (448), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 91/160 (56%), Positives = 111/160 (69%), Gaps = 25/160 (15%)

Query: 1   MAGDXXXXRSMSERSEQLSDTCRNPKQAVSCDNLKERSISTSKKSCLTEIKKDQVVEEE- 59
           M  D    RS+ E SEQ + T + PK+A +C NLKE+S   S+KSCL E++KDQ+VEEE 
Sbjct: 1   MVKDKQKKRSLLESSEQPAATRKMPKRAAACKNLKEKSFLISEKSCLIEMEKDQIVEEES 60

Query: 60  LAVRLTSDQDDGRPNRRITDFVLHDESGTGQPLEMLEVKDLFISGVILPLEVSTEKKKEK 119
           LAVR+T+ QDDGRPNRRIT+F+LHD +                        VST KKKEK
Sbjct: 61  LAVRMTAGQDDGRPNRRITEFILHDAT------------------------VSTGKKKEK 96

Query: 120 RIRCEGFGRIESWDISGYEDGSPVIWLSIDMADYECFKPA 159
            ++CEGFGR+ESWDISGYEDGSPVIWLS D+ADY+C KPA
Sbjct: 97  GVKCEGFGRVESWDISGYEDGSPVIWLSTDIADYDCQKPA 136