Miyakogusa Predicted Gene

Lj0g3v0328009.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0328009.1 tr|B9IFA6|B9IFA6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_666660 PE=4 SV=1,60,0.0001,
,CUFF.22323.1
         (137 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g17040.1                                                        49   1e-06

>Glyma08g17040.1 
          Length = 659

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/26 (69%), Positives = 25/26 (96%)

Query: 3   NKILLIHVRCGLILDARKLFDDIPEK 28
           N++L +HV+CGL+LDARKLFD++PEK
Sbjct: 157 NRVLFMHVKCGLMLDARKLFDEMPEK 182