Miyakogusa Predicted Gene

Lj0g3v0327989.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0327989.1 tr|B9HVS3|B9HVS3_POPTR Cytokinin receptor 1B
OS=Populus trichocarpa GN=CRE1B PE=2
SV=1,50,2e-19,coiled-coil,NULL,gene.g25597.t1.1
         (106 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g11060.2                                                       155   1e-38
Glyma08g11060.1                                                       155   1e-38
Glyma05g28070.1                                                       148   1e-36
Glyma02g47610.1                                                       127   2e-30
Glyma14g01040.1                                                       124   3e-29
Glyma02g09550.1                                                        99   1e-21
Glyma05g34310.1                                                        98   2e-21
Glyma07g27540.1                                                        94   4e-20
Glyma08g05370.1                                                        93   5e-20
Glyma16g23000.1                                                        61   2e-10
Glyma07g19620.1                                                        52   2e-07

>Glyma08g11060.2 
          Length = 1030

 Score =  155 bits (391), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 74/99 (74%), Positives = 82/99 (82%)

Query: 1   MYGSNVSGDVFYHVRTLNFGDPFRKHEMRYRFKQIPPFPWLAITTSIGFFVIALLLAQIS 60
           MYGSN SGD FYHV TLNFGDPFRKHEM  RFKQ PP+PW+AITTSIG  VIALL+  I 
Sbjct: 357 MYGSNESGDFFYHVSTLNFGDPFRKHEMHCRFKQKPPWPWVAITTSIGILVIALLVGYIF 416

Query: 61  YASVLHIAKVEEDYREMMELKERAEAADVAKSQLSCYLS 99
           +A+V  IAKVE+DYREMMELK+RAEAADVAKSQ    +S
Sbjct: 417 HATVNRIAKVEDDYREMMELKKRAEAADVAKSQFLATVS 455


>Glyma08g11060.1 
          Length = 1030

 Score =  155 bits (391), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 74/99 (74%), Positives = 82/99 (82%)

Query: 1   MYGSNVSGDVFYHVRTLNFGDPFRKHEMRYRFKQIPPFPWLAITTSIGFFVIALLLAQIS 60
           MYGSN SGD FYHV TLNFGDPFRKHEM  RFKQ PP+PW+AITTSIG  VIALL+  I 
Sbjct: 357 MYGSNESGDFFYHVSTLNFGDPFRKHEMHCRFKQKPPWPWVAITTSIGILVIALLVGYIF 416

Query: 61  YASVLHIAKVEEDYREMMELKERAEAADVAKSQLSCYLS 99
           +A+V  IAKVE+DYREMMELK+RAEAADVAKSQ    +S
Sbjct: 417 HATVNRIAKVEDDYREMMELKKRAEAADVAKSQFLATVS 455


>Glyma05g28070.1 
          Length = 1030

 Score =  148 bits (374), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 70/99 (70%), Positives = 82/99 (82%)

Query: 1   MYGSNVSGDVFYHVRTLNFGDPFRKHEMRYRFKQIPPFPWLAITTSIGFFVIALLLAQIS 60
           MYGSN SGDVF+HV TLNFGDPFRKHEM  RFKQ PP+PW+AITTSIG  VIALL+  I 
Sbjct: 357 MYGSNESGDVFFHVSTLNFGDPFRKHEMHCRFKQKPPWPWVAITTSIGILVIALLVGHIF 416

Query: 61  YASVLHIAKVEEDYREMMELKERAEAADVAKSQLSCYLS 99
           +A+V  IA+VE+DYR+ MELK++AEAADVAKSQ    +S
Sbjct: 417 HATVNRIAEVEDDYRKEMELKKQAEAADVAKSQFLATVS 455


>Glyma02g47610.1 
          Length = 1077

 Score =  127 bits (320), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 60/99 (60%), Positives = 71/99 (71%)

Query: 1   MYGSNVSGDVFYHVRTLNFGDPFRKHEMRYRFKQIPPFPWLAITTSIGFFVIALLLAQIS 60
           MYG++V+     H+ +L+FGDP RKHEM  RFKQ PP PW AI  S+G FVI LLL  I 
Sbjct: 393 MYGTDVADTGLLHISSLDFGDPLRKHEMHCRFKQRPPLPWTAINASVGVFVITLLLGHIF 452

Query: 61  YASVLHIAKVEEDYREMMELKERAEAADVAKSQLSCYLS 99
           YA++  IAKVE DYR+M ELK RAEAADVAKSQ    +S
Sbjct: 453 YAAINRIAKVEADYRQMRELKVRAEAADVAKSQFLATVS 491


>Glyma14g01040.1 
          Length = 1011

 Score =  124 bits (310), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 58/99 (58%), Positives = 71/99 (71%)

Query: 1   MYGSNVSGDVFYHVRTLNFGDPFRKHEMRYRFKQIPPFPWLAITTSIGFFVIALLLAQIS 60
           MYG++V+     ++ +L+FGDP RKHEM   FKQ PP PW AI  S+G FVI LLL  I 
Sbjct: 324 MYGTDVADTGLLYISSLDFGDPLRKHEMHCSFKQRPPLPWTAINASVGVFVITLLLGHIF 383

Query: 61  YASVLHIAKVEEDYREMMELKERAEAADVAKSQLSCYLS 99
           YA++  IAKVE+DYR+M ELK RAEAADVAKSQ    +S
Sbjct: 384 YAAINRIAKVEDDYRQMRELKVRAEAADVAKSQFLATVS 422


>Glyma02g09550.1 
          Length = 984

 Score = 98.6 bits (244), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 67/101 (66%), Gaps = 2/101 (1%)

Query: 1   MYGSNVS-GDV-FYHVRTLNFGDPFRKHEMRYRFKQIPPFPWLAITTSIGFFVIALLLAQ 58
           MYG+    GD+   H   L+FGDP+RKH+M  R+ Q  P  W+A+TT+  FFVI  L+  
Sbjct: 286 MYGNQYQEGDMSLAHESKLDFGDPYRKHQMICRYHQKAPTNWIALTTAFLFFVILFLVGY 345

Query: 59  ISYASVLHIAKVEEDYREMMELKERAEAADVAKSQLSCYLS 99
           I Y++  HI KVE+D+ EM ELK RAEAADVAKSQ    +S
Sbjct: 346 ILYSAGNHIVKVEDDFHEMQELKVRAEAADVAKSQFLATVS 386


>Glyma05g34310.1 
          Length = 997

 Score = 97.8 bits (242), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 66/101 (65%), Gaps = 2/101 (1%)

Query: 1   MYGS-NVSGDV-FYHVRTLNFGDPFRKHEMRYRFKQIPPFPWLAITTSIGFFVIALLLAQ 58
           MYG+ N  GD+   H   L+FGDP+R H M  R+ Q  P  W+A+TT+  FFVI LL+  
Sbjct: 278 MYGNQNEEGDMSLVHESKLDFGDPYRNHTMICRYHQKAPTNWIALTTAFLFFVILLLVGY 337

Query: 59  ISYASVLHIAKVEEDYREMMELKERAEAADVAKSQLSCYLS 99
           I Y +  HI KVE+D+ +M ELK RAEAADVAKSQ    +S
Sbjct: 338 ILYGAGNHIVKVEDDFHQMEELKVRAEAADVAKSQFLATVS 378


>Glyma07g27540.1 
          Length = 983

 Score = 93.6 bits (231), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 50/101 (49%), Positives = 65/101 (64%), Gaps = 2/101 (1%)

Query: 1   MYGSNVS-GDV-FYHVRTLNFGDPFRKHEMRYRFKQIPPFPWLAITTSIGFFVIALLLAQ 58
           MYG+    GD+   H   L+FGDP+RKH+M  R+ Q  P  W+A+TT+  FFVI  L+  
Sbjct: 286 MYGNLYEEGDMSLVHESKLDFGDPYRKHQMICRYHQKAPTNWIALTTAFLFFVILFLVGY 345

Query: 59  ISYASVLHIAKVEEDYREMMELKERAEAADVAKSQLSCYLS 99
           I Y +  HI KVE+D+  M ELK RAEAAD+AKSQ    +S
Sbjct: 346 ILYGAGNHIVKVEDDFHAMEELKVRAEAADIAKSQFLATVS 386


>Glyma08g05370.1 
          Length = 1010

 Score = 93.2 bits (230), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 51/101 (50%), Positives = 65/101 (64%), Gaps = 2/101 (1%)

Query: 1   MYGS-NVSGDV-FYHVRTLNFGDPFRKHEMRYRFKQIPPFPWLAITTSIGFFVIALLLAQ 58
           MYG+ N  GD+   H   L+FGD +RKH M  R+ Q  P  W+A+TT+  FFVI LL+  
Sbjct: 286 MYGNQNEEGDMSLVHESKLDFGDSYRKHTMICRYHQKAPTNWIALTTAFLFFVILLLVGY 345

Query: 59  ISYASVLHIAKVEEDYREMMELKERAEAADVAKSQLSCYLS 99
           I Y +  HI KVE+D+ +M ELK RAEAA VAKSQ    +S
Sbjct: 346 ILYGAGNHIVKVEDDFHQMEELKVRAEAAHVAKSQFLATVS 386


>Glyma16g23000.1 
          Length = 383

 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 4/80 (5%)

Query: 1   MYGS-NVSGDV-FYHVRTLNFGDPFRKHEMRYRFKQIPPFPWLAITTSIGFFVIALLLAQ 58
           MYG+ N  GD+   H   L+FGD +RKH M YR+ Q  P  W+ +T +  FFV  LL+  
Sbjct: 127 MYGNQNEEGDMSLIHESKLDFGDVYRKHTMIYRYHQKAPTNWITLTRTFLFFVSILLVGY 186

Query: 59  ISYASVLHIAKVEEDYREMM 78
           I Y +  HI K E+  +E+M
Sbjct: 187 ILYGAGNHIVKCEQ--KELM 204


>Glyma07g19620.1 
          Length = 620

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 13/101 (12%)

Query: 1   MYGSNVSGD--VFYHVRTLNFGDPFRKHEMRYRFKQIPPFPWLAITTSIGFFVIALLLAQ 58
           MYG+    D     H   L+FGDP+  H +  R+ Q  P  W+ +TT   FFVI LL+  
Sbjct: 249 MYGNQNKEDDMSLVHESKLDFGDPYGNHTIICRYHQKAPTNWITLTTKFLFFVILLLVGY 308

Query: 59  ISYASVLHIAKVEEDYREMMELKERAEAADVAKSQLSCYLS 99
             Y +          ++   ++  RAE A+VAKS+    +S
Sbjct: 309 NLYGA---------SWKSHCQI--RAEVANVAKSEFLATIS 338